ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet25a02 |
|---|---|
| Clone Library Name | barley_pub |
>PSBP_WHEAT (Q00434) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 258 Score = 140 bits (352), Expect = 1e-33 Identities = 71/73 (97%), Positives = 71/73 (97%) Frame = -2 Query: 355 LESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 176 LESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQ DKRWFKGAK Sbjct: 187 LESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQR-DKRWFKGAK 245 Query: 175 KFVENAAGSFSVA 137 KFVENAAGSFSVA Sbjct: 246 KFVENAAGSFSVA 258
>PSBP_SPIOL (P12302) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 267 Score = 136 bits (342), Expect = 1e-32 Identities = 65/73 (89%), Positives = 68/73 (93%) Frame = -2 Query: 355 LESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 176 LESS PVVDGKQYYSITVLTRTADGDEGGKHQ+I ATV DGKLY+CKAQAGDKRWFKGAK Sbjct: 195 LESSTPVVDGKQYYSITVLTRTADGDEGGKHQVIAATVKDGKLYICKAQAGDKRWFKGAK 254 Query: 175 KFVENAAGSFSVA 137 KFVE+A SFSVA Sbjct: 255 KFVESATSSFSVA 267
>PSBP_PEA (P16059) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 259 Score = 134 bits (336), Expect = 7e-32 Identities = 63/73 (86%), Positives = 69/73 (94%) Frame = -2 Query: 355 LESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 176 LESSAPV+ GKQYY+I+VLTRTADGDEGGKHQLITATV DGKLY+CKAQAGDKRWFKGA+ Sbjct: 187 LESSAPVIGGKQYYNISVLTRTADGDEGGKHQLITATVKDGKLYICKAQAGDKRWFKGAR 246 Query: 175 KFVENAAGSFSVA 137 KFVE+ A SFSVA Sbjct: 247 KFVEDTASSFSVA 259
>PSBP_NARPS (Q40407) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 265 Score = 129 bits (323), Expect = 2e-30 Identities = 62/73 (84%), Positives = 66/73 (90%) Frame = -2 Query: 355 LESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 176 LE+S PVV GK YYSI VLTRTADGDEGGKH LITATV+DGKLY+CKAQAGDKRWFKGAK Sbjct: 193 LETSTPVVGGKDYYSIHVLTRTADGDEGGKHLLITATVSDGKLYICKAQAGDKRWFKGAK 252 Query: 175 KFVENAAGSFSVA 137 KFVE+AA SFS A Sbjct: 253 KFVESAASSFSAA 265
>PSBP_SOLTU (P93566) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 260 Score = 128 bits (322), Expect = 3e-30 Identities = 61/73 (83%), Positives = 67/73 (91%) Frame = -2 Query: 355 LESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 176 LE+S+ V GKQYY ++VLTRTADGDEGGKHQLITATV DGKLY+CKAQAGDKRWFKGAK Sbjct: 188 LEASSATVGGKQYYYLSVLTRTADGDEGGKHQLITATVNDGKLYICKAQAGDKRWFKGAK 247 Query: 175 KFVENAAGSFSVA 137 KFVENAA SFS+A Sbjct: 248 KFVENAATSFSIA 260
>PSBP_LYCES (P29795) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 258 Score = 127 bits (319), Expect = 7e-30 Identities = 60/73 (82%), Positives = 67/73 (91%) Frame = -2 Query: 355 LESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 176 LE+S+ V GK+YY ++VLTRTADGDEGGKHQLITATV DGKLY+CKAQAGDKRWFKGAK Sbjct: 186 LEASSATVGGKEYYYLSVLTRTADGDEGGKHQLITATVNDGKLYICKAQAGDKRWFKGAK 245 Query: 175 KFVENAAGSFSVA 137 KFVENAA SFS+A Sbjct: 246 KFVENAATSFSIA 258
>PSBP_CUCSA (Q9SLQ8) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (OEC23) Length = 263 Score = 124 bits (311), Expect = 6e-29 Identities = 59/73 (80%), Positives = 66/73 (90%) Frame = -2 Query: 355 LESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 176 LE++A V+GK YY ++VLTRTADGDEGGKHQLITATV DGKLY+CKAQAGDKRWFKGA+ Sbjct: 191 LEATASNVNGKDYYFVSVLTRTADGDEGGKHQLITATVNDGKLYICKAQAGDKRWFKGAR 250 Query: 175 KFVENAAGSFSVA 137 KFVE AA SFSVA Sbjct: 251 KFVEGAASSFSVA 263
>PSBP_FRIAG (O49080) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 264 Score = 124 bits (310), Expect = 7e-29 Identities = 58/73 (79%), Positives = 65/73 (89%) Frame = -2 Query: 355 LESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 176 LE S PVV GKQYY+I+VLTRTADGDEGGKH +I+ATV DGKLY+CKAQAGDKRWFKGAK Sbjct: 192 LEVSTPVVGGKQYYNISVLTRTADGDEGGKHHVISATVTDGKLYICKAQAGDKRWFKGAK 251 Query: 175 KFVENAAGSFSVA 137 KFVE+ SF+VA Sbjct: 252 KFVESTTTSFNVA 264
>PSBP3_TOBAC (Q04127) Oxygen-evolving enhancer protein 2-3, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 266 Score = 122 bits (306), Expect = 2e-28 Identities = 57/73 (78%), Positives = 65/73 (89%) Frame = -2 Query: 355 LESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 176 LE+S V GKQYY +++LTRTADG+EGGKHQL+TATV DGKLY+CKAQAGDKRWFKGAK Sbjct: 194 LETSTAEVGGKQYYYLSILTRTADGNEGGKHQLVTATVNDGKLYICKAQAGDKRWFKGAK 253 Query: 175 KFVENAAGSFSVA 137 KFVEN A SFS+A Sbjct: 254 KFVENTATSFSLA 266
>PSBP1_TOBAC (Q7DM39) Oxygen-evolving enhancer protein 2-1, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 268 Score = 122 bits (306), Expect = 2e-28 Identities = 58/73 (79%), Positives = 66/73 (90%) Frame = -2 Query: 355 LESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 176 LE+S+ V GK+YY ++VLTRTADGDEGGKHQLI+ATV GKLY+CKAQAGDKRWFKGA+ Sbjct: 196 LETSSSTVGGKEYYILSVLTRTADGDEGGKHQLISATVNGGKLYICKAQAGDKRWFKGAR 255 Query: 175 KFVENAAGSFSVA 137 KFVENAA SFSVA Sbjct: 256 KFVENAATSFSVA 268
>PSBP2_ARATH (O49344) Oxygen-evolving enhancer protein 2-2, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 265 Score = 122 bits (306), Expect = 2e-28 Identities = 58/73 (79%), Positives = 65/73 (89%) Frame = -2 Query: 355 LESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 176 LE+S + GK+YY ++VLTRTADGDEGGKHQLITATV GKLY+CKAQAGDKRWFKGA+ Sbjct: 193 LETSTQEIGGKEYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGAR 252 Query: 175 KFVENAAGSFSVA 137 KFVENAA SFSVA Sbjct: 253 KFVENAATSFSVA 265
>PSBP1_ARATH (Q42029) Oxygen-evolving enhancer protein 2-1, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 263 Score = 121 bits (303), Expect = 5e-28 Identities = 59/73 (80%), Positives = 65/73 (89%) Frame = -2 Query: 355 LESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 176 LESS+ V GK YY ++VLTRTADGDEGGKHQLITATV GKLY+CKAQAGDKRWFKGA+ Sbjct: 191 LESSSQEVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGAR 250 Query: 175 KFVENAAGSFSVA 137 KFVE+AA SFSVA Sbjct: 251 KFVESAATSFSVA 263
>PSBP2_TOBAC (P18212) Oxygen-evolving enhancer protein 2-2, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 265 Score = 121 bits (303), Expect = 5e-28 Identities = 58/73 (79%), Positives = 65/73 (89%) Frame = -2 Query: 355 LESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 176 LE+S+ V GK YY ++VLTRTADG+EGGKHQLITATV DGKLY+CKAQAGDKRWFKGAK Sbjct: 193 LETSSAEVGGKPYYYLSVLTRTADGNEGGKHQLITATVNDGKLYICKAQAGDKRWFKGAK 252 Query: 175 KFVENAAGSFSVA 137 KFVEN A SFS+A Sbjct: 253 KFVENTATSFSLA 265
>PSBP_SINAL (P11594) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 260 Score = 116 bits (291), Expect = 1e-26 Identities = 57/73 (78%), Positives = 62/73 (84%) Frame = -2 Query: 355 LESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 176 LE++ V GK YY ++VLTRTADGDEGGKHQLITATV GKLY+CKAQAGDKRWFKGA Sbjct: 188 LETNIQDVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGAN 247 Query: 175 KFVENAAGSFSVA 137 KFVE AA SFSVA Sbjct: 248 KFVEKAATSFSVA 260
>PSBP_BRAJU (Q96334) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (Fragment) Length = 217 Score = 113 bits (283), Expect = 1e-25 Identities = 56/73 (76%), Positives = 61/73 (83%) Frame = -2 Query: 355 LESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 176 LE++ V GK YY ++VLTRTAD DEGGKHQLITATV GKLY+CKAQAGDKRWFKGA Sbjct: 145 LETNIQDVGGKPYYYLSVLTRTADEDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGAN 204 Query: 175 KFVENAAGSFSVA 137 KFVE AA SFSVA Sbjct: 205 KFVEKAATSFSVA 217
>PSBP_CHLRE (P11471) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) Length = 245 Score = 82.4 bits (202), Expect = 2e-16 Identities = 41/64 (64%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Frame = -2 Query: 328 GKQYYSITVLTRTADGDEGGKHQLITATV-ADGKLYVCKAQAGDKRWFKGAKKFVENAAG 152 GK YY +L R+ADGDEGG+HQLI ATV +D KLY+ K Q GDKRWFKGAKK A Sbjct: 181 GKTYYKYELLVRSADGDEGGRHQLIGATVGSDNKLYIIKIQIGDKRWFKGAKKEAMGAFD 240 Query: 151 SFSV 140 SF+V Sbjct: 241 SFTV 244
>MTP_PIG (Q865F1) Microsomal triglyceride transfer protein large subunit| precursor Length = 894 Score = 31.6 bits (70), Expect = 0.50 Identities = 18/45 (40%), Positives = 25/45 (55%) Frame = -2 Query: 310 ITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 176 + +L R+ DGD+ QLI T+ D K+ Q G+K FKG K Sbjct: 65 VVLLWRSPDGDDD---QLIQITIKDVKVENVNQQRGEKSIFKGKK 106
>NLAL1_ARATH (Q8VZT0) Putative H/ACA ribonucleoprotein complex subunit 1-like| protein 1 Length = 202 Score = 30.8 bits (68), Expect = 0.85 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +2 Query: 56 HACPGSVSTRCFPEEIP-LNSPIGHVYLCDTEGSCGVLDELLGALEPPLVSGLRLADVEL 232 HAC G T+ E+IP N+PI YL + + G +DE+ G + L S +++ + + Sbjct: 66 HACEGDAVTKLSQEKIPHFNAPI---YL-ENKTQIGKVDEIFGPINESLFS-IKMMEGIV 120 Query: 233 AVGDGGGDELVL 268 A GD+ + Sbjct: 121 ATSYSPGDKFFI 132
>MTP_BOVIN (P55156) Microsomal triglyceride transfer protein large subunit| precursor (Fragment) Length = 887 Score = 30.8 bits (68), Expect = 0.85 Identities = 18/45 (40%), Positives = 25/45 (55%) Frame = -2 Query: 310 ITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 176 + +L R+ DGD+ +QLI T+ D L Q G+K FKG K Sbjct: 58 VALLWRSPDGDD---NQLIQITMKDVNLENVNQQRGEKSIFKGKK 99
>PHSL_DESBA (P13065) Periplasmic [NiFeSe] hydrogenase large subunit (EC| 1.12.99.6) (NiFeSe hydrogenlyase large chain) Length = 513 Score = 28.9 bits (63), Expect = 3.2 Identities = 21/56 (37%), Positives = 26/56 (46%) Frame = -2 Query: 352 ESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFK 185 +++ P DGK SI LTR EG H I V DGK+ K G R F+ Sbjct: 2 QAATPAADGKVKISIDPLTRV----EG--HLKIEVEVKDGKVVDAKCSGGMFRGFE 51
>VPG_BYDVP (P09513) Putative genome-linked protein precursor (VPG) (17 kDa| protein) Length = 153 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +1 Query: 265 ASLPRLRPRSW*APLCCSTAYRPPPAPSSR 354 +S PR + W A L S + RPPP PS + Sbjct: 112 SSTPRASNQPWVATLIPSPSARPPPRPSGQ 141
>TRRAP_HUMAN (Q9Y4A5) Transformation/transcription domain-associated protein| (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog) Length = 3859 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Frame = +2 Query: 89 FPEEIPLNSP----IGHVYLCDTEGSCGVLDELLGALEPPLVSGLRLA 220 FPE++ LN+ + +VY +T EL LEP +SGLR A Sbjct: 2407 FPEDLELNAQFLDLVNYVYRDETLSG----SELTAKLEPAFLSGLRCA 2450
>TL30_ARATH (O49292) Thylakoid lumenal 29.8 kDa protein, chloroplast precursor| Length = 274 Score = 28.1 bits (61), Expect = 5.5 Identities = 21/72 (29%), Positives = 30/72 (41%) Frame = -2 Query: 355 LESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 176 L S+ DG+ YY + H LITAT A +LY+ +W K Sbjct: 212 LSSNVAEHDGRLYYQFELEP---------PHVLITATAAGNRLYLFSVTGNGLQW-KRHY 261 Query: 175 KFVENAAGSFSV 140 K ++ A SF + Sbjct: 262 KDLKRIASSFRI 273
>RF1_PICTO (Q6KZ24) Peptide chain release factor subunit 1 (Translation| termination factor aRF1) Length = 410 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +2 Query: 2 REIDLLVHPSSCTNQRNTHACPGSVSTRCFPEEIPLNSPIGHVYLCDTEGS 154 + +DLL+ + +R T+ CP T+ F E+ P +P LCD + S Sbjct: 309 KNLDLLIISDTLKKRRYTYKCPVCNDTKTFTEK-PRETP-----LCDKDNS 353
>MLA3_VISAL (P82683) Beta-galactoside-specific lectin III A chain, isoform 1| (EC 3.2.2.22) (MLA-3A, isoform 1) (ML-III A, isoform 1) (rRNA N-glycosidase) Length = 254 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = -2 Query: 352 ESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWF 188 +S+ PV D +++ + + + D ITA + LYV QAGD+ +F Sbjct: 42 QSTIPVSDAQRFVLVELTNQGGDS--------ITAAIDVTNLYVVAYQAGDQSYF 88
>MDH_MORS5 (P48364) Malate dehydrogenase (EC 1.1.1.37)| Length = 312 Score = 27.7 bits (60), Expect = 7.2 Identities = 18/52 (34%), Positives = 24/52 (46%) Frame = +2 Query: 200 VSGLRLADVELAVGDGGGDELVLPSLVSVRGPGEHRYAVVLLTVHHRRRALE 355 + G+ LADVE+ V G +LP L V+G VV LT + E Sbjct: 161 LKGISLADVEVPVIGGHSGVTILPLLSQVKGVEFTAEEVVALTARIQNAGTE 212
>SYFB_MYCPA (Q740J0) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 828 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +2 Query: 167 DELLGALEPPLVSGLRLADVELAVGDGGGDELVLP 271 D L G + PP + RLA + AV GG V+P Sbjct: 424 DRLAGVIYPPGTAAKRLAQIGAAVTADGGTLTVVP 458
>IDER_MYCTU (P0A672) Iron-dependent repressor ideR| Length = 230 Score = 27.3 bits (59), Expect = 9.4 Identities = 22/73 (30%), Positives = 33/73 (45%) Frame = +2 Query: 98 EIPLNSPIGHVYLCDTEGSCGVLDELLGALEPPLVSGLRLADVELAVGDGGGDELVLPSL 277 E+P SP+ V TE G +D + + +V R V + GGG +V+P Sbjct: 156 ELPAGSPVAVVVRQLTEHVQGDIDLITRLKDAGVVPNAR---VTVETTPGGGVTIVIPGH 212 Query: 278 VSVRGPGEHRYAV 316 +V P E +AV Sbjct: 213 ENVTLPHEMAHAV 225
>IDER_MYCBO (P0A673) Iron-dependent repressor ideR| Length = 230 Score = 27.3 bits (59), Expect = 9.4 Identities = 22/73 (30%), Positives = 33/73 (45%) Frame = +2 Query: 98 EIPLNSPIGHVYLCDTEGSCGVLDELLGALEPPLVSGLRLADVELAVGDGGGDELVLPSL 277 E+P SP+ V TE G +D + + +V R V + GGG +V+P Sbjct: 156 ELPAGSPVAVVVRQLTEHVQGDIDLITRLKDAGVVPNAR---VTVETTPGGGVTIVIPGH 212 Query: 278 VSVRGPGEHRYAV 316 +V P E +AV Sbjct: 213 ENVTLPHEMAHAV 225
>PTV3B_ECOLI (P08722) PTS system beta-glucoside-specific EIIBCA component| (EIIBCA-Bgl) (EII-Bgl) [Includes: Beta-glucoside-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS system beta-glucoside-specific EIIB component); Beta-glucoside p Length = 625 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/59 (30%), Positives = 27/59 (45%) Frame = +2 Query: 158 GVLDELLGALEPPLVSGLRLADVELAVGDGGGDELVLPSLVSVRGPGEHRYAVVLLTVH 334 G+ + G + P + +AD A G G +LPS+ VR P R A + T+H Sbjct: 478 GICSPMTGEIVPLI----HVADTTFASGLLGKGIAILPSVGEVRSPVAGRIASLFATLH 532
>NUOG_PSEFL (Q9KGW3) NADH-quinone oxidoreductase chain 3 (EC 1.6.99.5) (NADH| dehydrogenase I, chain G) (NDH-1, chain G) Length = 904 Score = 27.3 bits (59), Expect = 9.4 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = -2 Query: 355 LESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQAGDKRWFKGAK 176 L++SAP VDG + + R AD K LI A + G + +A A + K + Sbjct: 461 LDASAPAVDGLDSEAAALAQRIADALLAAKRPLIIAGTSLGSKALIEAAANIAKALKLRE 520 Query: 175 K 173 K Sbjct: 521 K 521 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,546,203 Number of Sequences: 219361 Number of extensions: 886758 Number of successful extensions: 2415 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 2354 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2412 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
