>dbj|AK068097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132D23, full
           insert sequence
          Length = 1129

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 106/126 (84%)
 Strand = Plus / Minus

                                                                       
Query: 181 ggtggccagtgggtcaaacatgtgcgaggtccggtccatgcacccggtcacgatgtccag 240
           |||||| ||||| ||||||||||||||| |  | ||||||||||| | ||| ||||||||
Sbjct: 828 ggtggcgagtggatcaaacatgtgcgagtttggatccatgcaccctgacacaatgtccag 769

                                                                       
Query: 241 cttgcaccggtctcctccctcctcgtagaagccgccgatatcgcagctcgtgatgacgat 300
           |||||| || ||||| ||||| |||||| ||| ||| || |||||||| |||||||| | 
Sbjct: 768 cttgcagcgatctcccccctcttcgtagtagctgcccatctcgcagcttgtgatgacaac 709

                 
Query: 301 gttttc 306
           ||||||
Sbjct: 708 gttttc 703

>dbj|AK059901.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G07, full
           insert sequence
          Length = 1116

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 106/126 (84%)
 Strand = Plus / Minus

                                                                       
Query: 181 ggtggccagtgggtcaaacatgtgcgaggtccggtccatgcacccggtcacgatgtccag 240
           |||||| ||||| ||||||||||||||| |  | ||||||||||| | ||| ||||||||
Sbjct: 822 ggtggcgagtggatcaaacatgtgcgagtttggatccatgcaccctgacacaatgtccag 763

                                                                       
Query: 241 cttgcaccggtctcctccctcctcgtagaagccgccgatatcgcagctcgtgatgacgat 300
           |||||| || ||||| ||||| |||||| ||| ||| || |||||||| |||||||| | 
Sbjct: 762 cttgcagcgatctcccccctcttcgtagtagctgcccatctcgcagcttgtgatgacaac 703

                 
Query: 301 gttttc 306
           ||||||
Sbjct: 702 gttttc 697

>gb|AY104509.1| Zea mays PCO104742 mRNA sequence
          Length = 1501

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                        
Query: 140  tcctccgaatcaaagtccagcgggcaggagccgtcgtcgatggtggccagtgggtcaaac 199
            ||||| |||||| | || || ||||||||||||||||||| ||||||||| ||||| |||
Sbjct: 1150 tcctcggaatcagactcgagtgggcaggagccgtcgtcgacggtggccagcgggtcgaac 1091

                                                              
Query: 200  atgtgcgaggtccggtccatgcacccggtcacgatgtccagcttgcaccg 249
            ||||  ||| |  ||||| |||||||| ||||||| ||||||||||||||
Sbjct: 1090 atgtcggagctggggtccgtgcacccgctcacgatatccagcttgcaccg 1041

>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete
              sequence
          Length = 190055

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 64/75 (85%)
 Strand = Plus / Minus

                                                                          
Query: 181    ggtggccagtgggtcaaacatgtgcgaggtccggtccatgcacccggtcacgatgtccag 240
              |||||| ||||| ||||||||||||||| |  | ||||||||||| | ||| ||||||||
Sbjct: 137716 ggtggcgagtggatcaaacatgtgcgagtttggatccatgcaccctgacacaatgtccag 137657

                             
Query: 241    cttgcaccggtctcc 255
              |||||| || |||||
Sbjct: 137656 cttgcagcgatctcc 137642

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 64/75 (85%)
 Strand = Plus / Minus

                                                                            
Query: 181      ggtggccagtgggtcaaacatgtgcgaggtccggtccatgcacccggtcacgatgtccag 240
                |||||| ||||| ||||||||||||||| |  | ||||||||||| | ||| ||||||||
Sbjct: 21444805 ggtggcgagtggatcaaacatgtgcgagtttggatccatgcaccctgacacaatgtccag 21444746

                               
Query: 241      cttgcaccggtctcc 255
                |||||| || |||||
Sbjct: 21444745 cttgcagcgatctcc 21444731

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 64/75 (85%)
 Strand = Plus / Minus

                                                                            
Query: 181      ggtggccagtgggtcaaacatgtgcgaggtccggtccatgcacccggtcacgatgtccag 240
                |||||| ||||| ||||||||||||||| |  | ||||||||||| | ||| ||||||||
Sbjct: 21437834 ggtggcgagtggatcaaacatgtgcgagtttggatccatgcaccctgacacaatgtccag 21437775

                               
Query: 241      cttgcaccggtctcc 255
                |||||| || |||||
Sbjct: 21437774 cttgcagcgatctcc 21437760

>emb|CT025818.2| Acinetobacter baumannii str. AYE. Genomics of Multi-Drug Resistance
           in Acinetobacter baumannii
          Length = 1386

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 27  tataaacaaagagaagaggac 47
           |||||||||||||||||||||
Sbjct: 472 tataaacaaagagaagaggac 452

>emb|AL606918.9| Mouse DNA sequence from clone RP23-327O13 on chromosome 4, complete
             sequence
          Length = 192787

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 78    ttttatagtaagtacatattg 98
             |||||||||||||||||||||
Sbjct: 90249 ttttatagtaagtacatattg 90269

>gb|AY289670.1| Cerbera manghas maturase (matR) gene, partial cds; mitochondrial
           gene for mitochondrial product
          Length = 1704

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 254 cctccctcctcgtagaagccgccg 277
           ||||| ||||||||||||||||||
Sbjct: 659 cctccttcctcgtagaagccgccg 682

>gb|AC114512.5| Rattus norvegicus 5 BAC CH230-5N9 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 247588

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    tgttttatagtaagtacata 95
             ||||||||||||||||||||
Sbjct: 58952 tgttttatagtaagtacata 58933

>emb|BX927392.9| Zebrafish DNA sequence from clone DKEY-17E11 in linkage group 11,
              complete sequence
          Length = 158543

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     taaacaaagagaagaggaca 48
              ||||||||||||||||||||
Sbjct: 114702 taaacaaagagaagaggaca 114721

>gb|AC131172.4| Rattus norvegicus 5 BAC CH230-12K15 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 230561

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   tgttttatagtaagtacata 95
            ||||||||||||||||||||
Sbjct: 2540 tgttttatagtaagtacata 2559

>emb|AL138767.15| Human DNA sequence from clone RP11-57C13 on chromosome 10 Contains the
             3' end of the MINPP gene for multiple inositol
             polyphosphate histidine phosphatase 1, three novel genes,
             a ribosomal protein S26 (RPS26) pseudogene, the 5' end of
             the PAPSS2 gene for 3'-phosphoadenosine 5'-phosphosulfate
             synthase 2 and a CpG island, complete sequence
          Length = 111645

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    caaagagaagaggacacatc 52
             ||||||||||||||||||||
Sbjct: 42696 caaagagaagaggacacatc 42677

>gb|AY947889.1| Streptomyces hygroscopicus strain AM 3672 herbimycin polyketide
             biosynthetic gene cluster, complete sequence
          Length = 86941

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   ctcctcgtagaagccgccga 278
             ||||||||||||||||||||
Sbjct: 17632 ctcctcgtagaagccgccga 17651

>emb|CR627060.1| Homo sapiens mRNA; cDNA DKFZp781K0715 (from clone DKFZp781K0715)
          Length = 5641

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   ttttatacaagtataaacaa 35
            ||||||||||||||||||||
Sbjct: 2675 ttttatacaagtataaacaa 2656

>dbj|AK123077.1| Homo sapiens cDNA FLJ41082 fis, clone ADRGL2010152, highly  similar
           to Mus musculus piL mRNA
          Length = 2068

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  ttttatacaagtataaacaa 35
           ||||||||||||||||||||
Sbjct: 656 ttttatacaagtataaacaa 637

>gb|AC023812.7|AC023812 Homo sapiens chromosome 3 clone 95e11 map 3p, complete sequence
          Length = 170807

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     ttttatacaagtataaacaa 35
              ||||||||||||||||||||
Sbjct: 134106 ttttatacaagtataaacaa 134087

>gb|AC020751.5|AC020751 Homo sapiens chromosome 3 clone RP11-10H6 map 3p, complete sequence
          Length = 170631

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     ttttatacaagtataaacaa 35
              ||||||||||||||||||||
Sbjct: 155730 ttttatacaagtataaacaa 155711

>gb|AC018812.5|AC018812 Homo sapiens chromosome 3 clone RP11-161D20 map 3p, complete sequence
          Length = 169199

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    ttttatacaagtataaacaa 35
             ||||||||||||||||||||
Sbjct: 51354 ttttatacaagtataaacaa 51335

>gb|AC024060.6| Homo sapiens chromosome 3 clone RP11-97C16 map 3p, complete sequence
          Length = 174313

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     ttttatacaagtataaacaa 35
              ||||||||||||||||||||
Sbjct: 103661 ttttatacaagtataaacaa 103642

>emb|BX647351.1|HSM807495 Homo sapiens mRNA; cDNA DKFZp779J098 (from clone DKFZp779J098)
          Length = 4630

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   ttttatacaagtataaacaa 35
            ||||||||||||||||||||
Sbjct: 2595 ttttatacaagtataaacaa 2576

>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 260     tcctcgtagaagccgccgat 279
               ||||||||||||||||||||
Sbjct: 1409599 tcctcgtagaagccgccgat 1409618

>gb|AC068314.6| Homo sapiens chromosome 3 clone RP11-194D21 map 3p, complete sequence
          Length = 179814

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     ttttatacaagtataaacaa 35
              ||||||||||||||||||||
Sbjct: 171437 ttttatacaagtataaacaa 171418


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,902,556
Number of Sequences: 3902068
Number of extensions: 2902556
Number of successful extensions: 59581
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59465
Number of HSP's gapped (non-prelim): 116
length of query: 318
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 296
effective length of database: 17,147,199,772
effective search space: 5075571132512
effective search space used: 5075571132512
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)