ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet24e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome... 159 8e-36
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 159 8e-36
3dbj|AK070472.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 8e-36
4dbj|AK065501.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 8e-36
5dbj|AK102170.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
6dbj|AK062748.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
7dbj|AK060897.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
8gb|BT019241.1| Zea mays clone Contig914.F mRNA sequence 105 1e-19
9gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-like pro... 103 4e-19
10gb|AY109348.1| Zea mays CL1296_1 mRNA sequence 101 2e-18
11gb|AF160475.1|AF160475 Zea mays phytochelatin synthetase-like pr... 100 6e-18
12dbj|AK119166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 2e-08
13gb|AC008148.2|AC008148 Arabidopsis thaliana chromosome I BAC F15... 48 0.021
14gb|AC163274.5| Mus musculus chromosome 1, clone RP23-202P19, com... 46 0.082
15gb|AC019063.4| Homo sapiens BAC clone RP11-144H20 from 7, comple... 46 0.082
16gb|AC015604.5|AC015604 Homo sapiens, clone RP11-45D18, complete ... 46 0.082
17dbj|AP000428.3| Homo sapiens genomic DNA, chromosome 8q23, clone... 46 0.082
18emb|AL593850.10| Mouse DNA sequence from clone RP23-436B15 on ch... 46 0.082
19emb|X65974.1|NTGSAMR2 N.tabacum mRNA for glutamate-1-semialdehyd... 44 0.32
20gb|AC092585.2| Homo sapiens BAC clone RP11-20L17 from 7, complet... 42 1.3
21emb|BX547935.12| Zebrafish DNA sequence from clone CH211-207C1 i... 42 1.3
22gb|AF234244.1|AF234236S8 Homo sapiens sodium-phosphate transport... 42 1.3
23gb|AC092436.5| Homo sapiens BAC clone RP11-302F12 from 4, comple... 42 1.3
24gb|AC010183.6| Homo sapiens 12 BAC RP11-100F15 (Roswell Park Can... 42 1.3
25gb|AY739093.1| Takifugu rubripes frMUT, frGPR136L1, and frGPR136... 40 5.1
26gb|AY341443.1| Phaseolus vulgaris cultivar Sprite BAC 78L17, par... 40 5.1
27gb|AC166090.23| Glycine max clone gmw1-103e11, complete sequence 40 5.1
28gb|AC123846.5| Mus musculus BAC clone RP23-435B22 from chromosom... 40 5.1
29gb|AC125069.4| Mus musculus BAC clone RP23-436E5 from chromosome... 40 5.1
30emb|CR555294.10| Zebrafish DNA sequence from clone CH211-169P4 i... 40 5.1
31ref|XM_645236.1| Entamoeba histolytica HM-1:IMSS RAD54 DNA repai... 40 5.1
32ref|XM_671018.1| Plasmodium berghei strain ANKA protein phosphat... 40 5.1
33gb|AC144564.12| Medicago truncatula clone mth2-17n4, complete se... 40 5.1
34gb|AC182019.3| Felis catus clone RP86-75P21, complete sequence 40 5.1
35emb|AL023875.2|HS1044O17 Human DNA sequence from clone RP5-1044O... 40 5.1
36gb|AC016045.8|AC016045 Homo sapiens chromosome 15 clone RP11-96N... 40 5.1
37gb|AC012512.7| Homo sapiens BAC clone RP11-561O7 from 2, complet... 40 5.1
38gb|AC012069.10| Homo sapiens BAC clone RP11-300D24 from 2, compl... 40 5.1
39emb|BX005383.8| Zebrafish DNA sequence from clone DKEYP-19E1 in ... 40 5.1
40emb|AL928537.12| Mouse DNA sequence from clone RP23-236E7 on chr... 40 5.1
41emb|AL954868.6| Zebrafish DNA sequence from clone CH211-254N4 in... 40 5.1
42dbj|AP001988.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 5.1
43dbj|AP000923.5| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 5.1
44emb|AL928789.4| Mouse DNA sequence from clone RP23-435F21 on chr... 40 5.1 
>gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0073E05, complete sequence
          Length = 178013

 Score =  159 bits (80), Expect = 8e-36
 Identities = 219/260 (84%), Gaps = 9/260 (3%)
 Strand = Plus / Plus

                                                                         
Query: 116   tgctataaaatacagaaggtgcaaccgtaattacctaaattgcagtaactaagttcacca 175
             |||||||| ||||| |||||||||| ||||||| |||  |||||||||||||||||||||
Sbjct: 50311 tgctataacatacaaaaggtgcaactgtaattatctagtttgcagtaactaagttcacca 50370

                                                                         
Query: 176   aagtttccatggccagtatata--ccaaacaagaaaaacatttccagccccttttaactt 233
             || |  |  |||||||||||||  ||||| |||||| ||||||    |  |||||||| |
Sbjct: 50371 aaatg-ctgtggccagtatatataccaaaaaagaaatacattttggccttcttttaacat 50429

                                                                         
Query: 234   acaaaacacaaaca--tatcagctttcctcagcgcgacacccgtctcttctatgcaaccg 291
             |||| ||||| |||  |||||||||||||||||| |||| |  |||||||||||||||||
Sbjct: 50430 acaacacacacacacatatcagctttcctcagcgtgacatct-tctcttctatgcaaccg 50488

                                                                         
Query: 292   tggaattgaatgaacaaatgacctgttgccgcgcacatcatggaacctgacagcgacttg 351
             ||||| ||||||||||||||| ||||||| | ||||| ||||||||||||||   |||||
Sbjct: 50489 tggaactgaatgaacaaatgatctgttgcagtgcacaccatggaacctgaca---acttg 50545

                                 
Query: 352   aagctcgctgaatctcttgg 371
             |||||| | |||| ||||||
Sbjct: 50546 aagctcaccgaatttcttgg 50565
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  159 bits (80), Expect = 8e-36
 Identities = 219/260 (84%), Gaps = 9/260 (3%)
 Strand = Plus / Plus

                                                                            
Query: 116      tgctataaaatacagaaggtgcaaccgtaattacctaaattgcagtaactaagttcacca 175
                |||||||| ||||| |||||||||| ||||||| |||  |||||||||||||||||||||
Sbjct: 18577196 tgctataacatacaaaaggtgcaactgtaattatctagtttgcagtaactaagttcacca 18577255

                                                                            
Query: 176      aagtttccatggccagtatata--ccaaacaagaaaaacatttccagccccttttaactt 233
                || |  |  |||||||||||||  ||||| |||||| ||||||    |  |||||||| |
Sbjct: 18577256 aaatg-ctgtggccagtatatataccaaaaaagaaatacattttggccttcttttaacat 18577314

                                                                            
Query: 234      acaaaacacaaaca--tatcagctttcctcagcgcgacacccgtctcttctatgcaaccg 291
                |||| ||||| |||  |||||||||||||||||| |||| |  |||||||||||||||||
Sbjct: 18577315 acaacacacacacacatatcagctttcctcagcgtgacatct-tctcttctatgcaaccg 18577373

                                                                            
Query: 292      tggaattgaatgaacaaatgacctgttgccgcgcacatcatggaacctgacagcgacttg 351
                ||||| ||||||||||||||| ||||||| | ||||| ||||||||||||||   |||||
Sbjct: 18577374 tggaactgaatgaacaaatgatctgttgcagtgcacaccatggaacctgaca---acttg 18577430

                                    
Query: 352      aagctcgctgaatctcttgg 371
                |||||| | |||| ||||||
Sbjct: 18577431 aagctcaccgaatttcttgg 18577450
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>dbj|AK070472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054D22, full
            insert sequence
          Length = 2028

 Score =  159 bits (80), Expect = 8e-36
 Identities = 219/260 (84%), Gaps = 9/260 (3%)
 Strand = Plus / Minus

                                                                        
Query: 116  tgctataaaatacagaaggtgcaaccgtaattacctaaattgcagtaactaagttcacca 175
            |||||||| ||||| |||||||||| ||||||| |||  |||||||||||||||||||||
Sbjct: 1897 tgctataacatacaaaaggtgcaactgtaattatctagtttgcagtaactaagttcacca 1838

                                                                        
Query: 176  aagtttccatggccagtatata--ccaaacaagaaaaacatttccagccccttttaactt 233
            || |  |  |||||||||||||  ||||| |||||| ||||||    |  |||||||| |
Sbjct: 1837 aaatg-ctgtggccagtatatataccaaaaaagaaatacattttggccttcttttaacat 1779

                                                                        
Query: 234  acaaaacacaaaca--tatcagctttcctcagcgcgacacccgtctcttctatgcaaccg 291
            |||| ||||| |||  |||||||||||||||||| |||| |  |||||||||||||||||
Sbjct: 1778 acaacacacacacacatatcagctttcctcagcgtgacatct-tctcttctatgcaaccg 1720

                                                                        
Query: 292  tggaattgaatgaacaaatgacctgttgccgcgcacatcatggaacctgacagcgacttg 351
            ||||| ||||||||||||||| ||||||| | ||||| ||||||||||||||   |||||
Sbjct: 1719 tggaactgaatgaacaaatgatctgttgcagtgcacaccatggaacctgaca---acttg 1663

                                
Query: 352  aagctcgctgaatctcttgg 371
            |||||| | |||| ||||||
Sbjct: 1662 aagctcaccgaatttcttgg 1643
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>dbj|AK065501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026K11, full
            insert sequence
          Length = 3797

 Score =  159 bits (80), Expect = 8e-36
 Identities = 219/260 (84%), Gaps = 9/260 (3%)
 Strand = Plus / Plus

                                                                        
Query: 116  tgctataaaatacagaaggtgcaaccgtaattacctaaattgcagtaactaagttcacca 175
            |||||||| ||||| |||||||||| ||||||| |||  |||||||||||||||||||||
Sbjct: 997  tgctataacatacaaaaggtgcaactgtaattatctagtttgcagtaactaagttcacca 1056

                                                                        
Query: 176  aagtttccatggccagtatata--ccaaacaagaaaaacatttccagccccttttaactt 233
            || |  |  |||||||||||||  ||||| |||||| ||||||    |  |||||||| |
Sbjct: 1057 aaatg-ctgtggccagtatatataccaaaaaagaaatacattttggccttcttttaacat 1115

                                                                        
Query: 234  acaaaacacaaaca--tatcagctttcctcagcgcgacacccgtctcttctatgcaaccg 291
            |||| ||||| |||  |||||||||||||||||| |||| |  |||||||||||||||||
Sbjct: 1116 acaacacacacacacatatcagctttcctcagcgtgacatct-tctcttctatgcaaccg 1174

                                                                        
Query: 292  tggaattgaatgaacaaatgacctgttgccgcgcacatcatggaacctgacagcgacttg 351
            ||||| ||||||||||||||| ||||||| | ||||| ||||||||||||||   |||||
Sbjct: 1175 tggaactgaatgaacaaatgatctgttgcagtgcacaccatggaacctgaca---acttg 1231

                                
Query: 352  aagctcgctgaatctcttgg 371
            |||||| | |||| ||||||
Sbjct: 1232 aagctcaccgaatttcttgg 1251
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>dbj|AK102170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086I06, full
            insert sequence
          Length = 2117

 Score =  155 bits (78), Expect = 1e-34
 Identities = 197/229 (86%), Gaps = 7/229 (3%)
 Strand = Plus / Minus

                                                                        
Query: 42   aaaacattattatgtaacccatacaatcactacaaagaaaggcagtcatatgattcaaat 101
            ||||| |||||||| |||| |||||   ||||||| |||||| ||||||||  ||||| |
Sbjct: 2066 aaaacgttattatggaacctatacatgtactacaa-gaaaggaagtcatatagttcaa-t 2009

                                                                        
Query: 102  taaatgtctgcgtctgctataaaatacagaaggtgcaaccgtaattacctaaattgcagt 161
            ||||| |||| || |||||||||||||| |||||||||| |||||||||||| |||||||
Sbjct: 2008 taaatttctgggt-tgctataaaatacaaaaggtgcaactgtaattacctaatttgcagt 1950

                                                                        
Query: 162  aactaagttcaccaaagtttccatggccagtatataccaaacaagaaaaacatttccagc 221
            | ||||||||||||||||  |  || |||||||||||||||||||||| ||||||   ||
Sbjct: 1949 atctaagttcaccaaagtg-ctgtgcccagtatataccaaacaagaaatacatttt--gc 1893

                                                             
Query: 222  cccttttaacttacaaaacacaaacatatcagctttcctcagcgcgaca 270
            |||||| ||||||||||||||| |  |||||||||||||||||| ||||
Sbjct: 1892 cccttt-aacttacaaaacacacatgtatcagctttcctcagcgtgaca 1845
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>dbj|AK062748.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-F11, full
           insert sequence
          Length = 706

 Score =  125 bits (63), Expect = 1e-25
 Identities = 117/133 (87%), Gaps = 4/133 (3%)
 Strand = Plus / Minus

                                                                       
Query: 239 acacaaacatatcagctttcctcagcgcgacacccgtctcttctatgcaaccgtggaatt 298
           ||||| ||||||||||||||||||||| |||| |  |||||||||||||||||||||| |
Sbjct: 635 acacacacatatcagctttcctcagcgtgacatct-tctcttctatgcaaccgtggaact 577

                                                                       
Query: 299 gaatgaacaaatgacctgttgccgcgcacatcatggaacctgacagcgacttgaagctcg 358
           |||||||||||||| ||||||| | ||||| ||||||||||||||   ||||||||||| 
Sbjct: 576 gaatgaacaaatgatctgttgcagtgcacaccatggaacctgaca---acttgaagctca 520

                        
Query: 359 ctgaatctcttgg 371
           | |||| ||||||
Sbjct: 519 ccgaatttcttgg 507
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>dbj|AK060897.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D01, full
            insert sequence
          Length = 1765

 Score =  125 bits (63), Expect = 1e-25
 Identities = 117/133 (87%), Gaps = 4/133 (3%)
 Strand = Plus / Minus

                                                                        
Query: 239  acacaaacatatcagctttcctcagcgcgacacccgtctcttctatgcaaccgtggaatt 298
            ||||| ||||||||||||||||||||| |||| |  |||||||||||||||||||||| |
Sbjct: 1694 acacacacatatcagctttcctcagcgtgacatct-tctcttctatgcaaccgtggaact 1636

                                                                        
Query: 299  gaatgaacaaatgacctgttgccgcgcacatcatggaacctgacagcgacttgaagctcg 358
            |||||||||||||| ||||||| | ||||| ||||||||||||||   ||||||||||| 
Sbjct: 1635 gaatgaacaaatgatctgttgcagtgcacaccatggaacctgaca---acttgaagctca 1579

                         
Query: 359  ctgaatctcttgg 371
            | |||| ||||||
Sbjct: 1578 ccgaatttcttgg 1566
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>gb|BT019241.1| Zea mays clone Contig914.F mRNA sequence
          Length = 794

 Score =  105 bits (53), Expect = 1e-19
 Identities = 68/73 (93%)
 Strand = Plus / Plus

                                                                       
Query: 107 gtctgcgtctgctataaaatacagaaggtgcaaccgtaattacctaaattgcagtaacta 166
           ||||| || |||||||||||||| |||||||||| |||||||||||| ||||||||||||
Sbjct: 88  gtctgagtttgctataaaatacaaaaggtgcaactgtaattacctaatttgcagtaacta 147

                        
Query: 167 agttcaccaaagt 179
           |||||||||||||
Sbjct: 148 agttcaccaaagt 160



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 292 tggaattgaatgaacaaatgacctgttgccgcgcacatcatggaacctgacagcgacttg 351
           |||||||||||||| ||||  || ||||| | |||| |||||||| | |||| | |||||
Sbjct: 277 tggaattgaatgaataaatatcccgttgcagtgcacctcatggaatccgacatcaacttg 336

                
Query: 352 aagct 356
           |||||
Sbjct: 337 aagct 341
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>gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-like protein 1, phytochelatin
             synthetase-like protein 2, and cytochrome b5 (Cyb5) genes,
             complete cds; and MADS box protein AGLG1 (Aglg1) gene,
             partial cds
          Length = 23102

 Score =  103 bits (52), Expect = 4e-19
 Identities = 61/64 (95%)
 Strand = Plus / Minus

                                                                         
Query: 116   tgctataaaatacagaaggtgcaaccgtaattacctaaattgcagtaactaagttcacca 175
             |||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 12024 tgctataaaatacaaaaggtgcaactgtaattacctaatttgcagtaactaagttcacca 11965

                 
Query: 176   aagt 179
             ||||
Sbjct: 11964 aagt 11961



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                         
Query: 275   tctcttctatgcaaccgtggaattgaatgaacaaatgacctgttgccgcgcacatcatgg 334
             |||||||| ||||||| |||||||||||||| |||||||||||||| | |||| ||||||
Sbjct: 11861 tctcttctgtgcaaccatggaattgaatgaataaatgacctgttgcagtgcacctcatgg 11802

                                                 
Query: 335   aacctgacagcgacttgaagctcgctgaatctcttg 370
             || |||||| | |||||||||| ||| || ||||||
Sbjct: 11801 aatctgacatcaacttgaagcttgctaaacctcttg 11766
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>gb|AY109348.1| Zea mays CL1296_1 mRNA sequence
          Length = 2139

 Score =  101 bits (51), Expect = 2e-18
 Identities = 97/111 (87%), Gaps = 1/111 (0%)
 Strand = Plus / Minus

                                                                        
Query: 107  gtctgcgtctgctataaaatacagaaggtgcaaccgtaattacctaaattgcagtaacta 166
            ||||| || |||||||||||||| |||||||||| ||||||||||||  |||||||||||
Sbjct: 2026 gtctgggtttgctataaaatacaaaaggtgcaactgtaattacctaatctgcagtaacta 1967

                                                               
Query: 167  agttcaccaaagt-ttccatggccagtatataccaaacaagaaaaacattt 216
            ||||||||||||| ||  | |||   |||||||||||||||||| ||||||
Sbjct: 1966 agttcaccaaagtgttgtagggctgttatataccaaacaagaaatacattt 1916



 Score =  101 bits (51), Expect = 2e-18
 Identities = 100/115 (86%), Gaps = 1/115 (0%)
 Strand = Plus / Minus

                                                                        
Query: 103  aaatgtctgcgtctgctataaaatacagaaggtgcaaccgtaattacctaaattgcagta 162
            |||| |||| || |||||||||||||| |||||||||| ||||||||||||  |||||||
Sbjct: 1375 aaatttctgggtttgctataaaatacaaaaggtgcaactgtaattacctaatctgcagta 1316

                                                                   
Query: 163  actaagttcaccaaagt-ttccatggccagtatataccaaacaagaaaaacattt 216
            ||||||||||||||||| ||  | |||   |||||||||||||||||| ||||||
Sbjct: 1315 actaagttcaccaaagtgttgtagggctgttatataccaaacaagaaatacattt 1261



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                        
Query: 279  ttctatgcaaccgtggaattgaatgaacaaatgacctgttgccgcgcacatcatggaacc 338
            |||| ||||||| |||||||||||||||||||||| |||||| | |||| |||||||| |
Sbjct: 1857 ttctgtgcaaccatggaattgaatgaacaaatgacttgttgcagtgcacctcatggaatc 1798

                                            
Query: 339  tgacagcgacttgaagctcgctgaatctcttg 370
            ||||| | ||||||| || ||| || ||||||
Sbjct: 1797 tgacatcaacttgaaacttgctaaacctcttg 1766



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                        
Query: 279  ttctatgcaaccgtggaattgaatgaacaaatgacctgttgccgcgcacatcatggaacc 338
            |||| ||||||| |||||||||||||||||||||| |||||| | |||| |||||||| |
Sbjct: 1202 ttctgtgcaaccatggaattgaatgaacaaatgacttgttgcagtgcacctcatggaatc 1143

                                            
Query: 339  tgacagcgacttgaagctcgctgaatctcttg 370
            ||||| | ||||||| || ||| || ||||||
Sbjct: 1142 tgacatcaacttgaaacttgctaaacctcttg 1111
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>gb|AF160475.1|AF160475 Zea mays phytochelatin synthetase-like protein (CISEZmG) mRNA,
            complete cds
          Length = 1407

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 90/102 (88%), Gaps = 1/102 (0%)
 Strand = Plus / Minus

                                                                        
Query: 116  tgctataaaatacagaaggtgcaaccgtaattacctaaattgcagtaactaagttcacca 175
            |||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||||
Sbjct: 1350 tgctataaaatacaaaaggtgcaactgtaattacctaatctgcagtaactaagttcacca 1291

                                                      
Query: 176  aagt-ttccatggccagtatataccaaacaagaaaaacattt 216
            |||| ||  | |||   |||||||||||||||||| ||||||
Sbjct: 1290 aagtgttgtagggctgttatataccaaacaagaaatacattt 1249



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                        
Query: 279  ttctatgcaaccgtggaattgaatgaacaaatgacctgttgccgcgcacatcatggaacc 338
            |||| ||||||| |||||||||||||||||||||| |||||| | |||| |||||||| |
Sbjct: 1191 ttctgtgcaaccatggaattgaatgaacaaatgacttgttgcagtgcacctcatggaatc 1132

                           
Query: 339  tgacagcgacttgaa 353
            ||||| | |||||||
Sbjct: 1131 tgacatcaacttgaa 1117
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>dbj|AK119166.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-F04, full
            insert sequence
          Length = 1442

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                      
Query: 116  tgctataaaatacagaaggtgcaaccgtaattacctaaattgcagtaactaagttcac 173
            |||||||| ||||| |||||||||| ||||||| |||  |||||||||||||||||||
Sbjct: 1331 tgctataacatacaaaaggtgcaactgtaattatctagtttgcagtaactaagttcac 1274
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>gb|AC008148.2|AC008148 Arabidopsis thaliana chromosome I BAC F15H11 genomic sequence, complete
             sequence
          Length = 110514

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 234   acaaaacacaaacatatcagcttt 257
             ||||||||||||||||||||||||
Sbjct: 87280 acaaaacacaaacatatcagcttt 87303
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>gb|AC163274.5| Mus musculus chromosome 1, clone RP23-202P19, complete sequence
          Length = 208546

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 32   aaattatacaaaaacattattat 54
            |||||||||||||||||||||||
Sbjct: 5393 aaattatacaaaaacattattat 5371
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>gb|AC019063.4| Homo sapiens BAC clone RP11-144H20 from 7, complete sequence
          Length = 187282

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 27    ttcacaaattatacaaaaacatt 49
             |||||||||||||||||||||||
Sbjct: 30158 ttcacaaattatacaaaaacatt 30136
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>gb|AC015604.5|AC015604 Homo sapiens, clone RP11-45D18, complete sequence
          Length = 172914

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 200   aaacaagaaaaacatttccagcc 222
             |||||||||||||||||||||||
Sbjct: 93135 aaacaagaaaaacatttccagcc 93113
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>dbj|AP000428.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1303B4
          Length = 173872

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 200   aaacaagaaaaacatttccagcc 222
             |||||||||||||||||||||||
Sbjct: 23552 aaacaagaaaaacatttccagcc 23574
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>emb|AL593850.10| Mouse DNA sequence from clone RP23-436B15 on chromosome 1, complete
              sequence
          Length = 197663

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 32     aaattatacaaaaacattattat 54
              |||||||||||||||||||||||
Sbjct: 149265 aaattatacaaaaacattattat 149243
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>emb|X65974.1|NTGSAMR2 N.tabacum mRNA for glutamate-1-semialdehyde aminotransferase
          Length = 1715

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 198  ccaaacaagaaaaacatttcca 219
            ||||||||||||||||||||||
Sbjct: 1593 ccaaacaagaaaaacatttcca 1572
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>gb|AC092585.2| Homo sapiens BAC clone RP11-20L17 from 7, complete sequence
          Length = 137446

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 27    ttcacaaattatacaaaaaca 47
             |||||||||||||||||||||
Sbjct: 96419 ttcacaaattatacaaaaaca 96399
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>emb|BX547935.12| Zebrafish DNA sequence from clone CH211-207C1 in linkage group 16,
              complete sequence
          Length = 195252

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 30     acaaattatacaaaaacatta 50
              |||||||||||||||||||||
Sbjct: 162859 acaaattatacaaaaacatta 162879
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>gb|AF234244.1|AF234236S8 Homo sapiens sodium-phosphate transporter gene, exons 10 and 11
          Length = 494

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 234 acaaaacacaaacatatcagc 254
           |||||||||||||||||||||
Sbjct: 298 acaaaacacaaacatatcagc 278
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>gb|AC092436.5| Homo sapiens BAC clone RP11-302F12 from 4, complete sequence
          Length = 202133

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 234   acaaaacacaaacatatcagc 254
             |||||||||||||||||||||
Sbjct: 82108 acaaaacacaaacatatcagc 82088
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>gb|AC010183.6| Homo sapiens 12 BAC RP11-100F15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 175504

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 95     ttcaaattaaatgtctgcgtc 115
              |||||||||||||||||||||
Sbjct: 141590 ttcaaattaaatgtctgcgtc 141610
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>gb|AY739093.1| Takifugu rubripes frMUT, frGPR136L1, and frGPR136L2 genes, complete
              sequence; frRUNX2 (frRUNX2) gene, complete cds; and
              frCLIC5, frENPP5, frPHIP, frIRAK1BP1, and frTBX18 genes,
              complete sequence
          Length = 235024

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     tcacaaattatacaaaaaca 47
              ||||||||||||||||||||
Sbjct: 232941 tcacaaattatacaaaaaca 232960
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>gb|AY341443.1| Phaseolus vulgaris cultivar Sprite BAC 78L17, partial sequence
          Length = 106592

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    aaattatacaaaaacattat 51
             ||||||||||||||||||||
Sbjct: 52772 aaattatacaaaaacattat 52753
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>gb|AC166090.23| Glycine max clone gmw1-103e11, complete sequence
          Length = 89397

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 182   ccatggccagtatataccaaacaagaaaaaca 213
             |||| ||||||||||||||||  |||||||||
Sbjct: 18585 ccatagccagtatataccaaatcagaaaaaca 18554
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>gb|AC123846.5| Mus musculus BAC clone RP23-435B22 from chromosome 2, complete sequence
          Length = 221128

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    gaaaaacatttccagcccct 225
              ||||||||||||||||||||
Sbjct: 111669 gaaaaacatttccagcccct 111688
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>gb|AC125069.4| Mus musculus BAC clone RP23-436E5 from chromosome 2, complete sequence
          Length = 199446

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    catatgattcaaattaaatg 107
             ||||||||||||||||||||
Sbjct: 73082 catatgattcaaattaaatg 73101
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>emb|CR555294.10| Zebrafish DNA sequence from clone CH211-169P4 in linkage group 19,
             complete sequence
          Length = 142042

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    tttcacaaattatacaaaaacatt 49
             ||||| ||||||||||||||||||
Sbjct: 59889 tttcataaattatacaaaaacatt 59866
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>ref|XM_645236.1| Entamoeba histolytica HM-1:IMSS RAD54 DNA repair protein, putative
            (227.t00011) partial mRNA
          Length = 2133

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 31   caaattatacaaaaacatta 50
            ||||||||||||||||||||
Sbjct: 1457 caaattatacaaaaacatta 1476
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>ref|XM_671018.1| Plasmodium berghei strain ANKA protein phosphatase 2c
           (PB000146.00.0) partial mRNA
          Length = 996

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 29  cacaaattatacaaaaacat 48
           ||||||||||||||||||||
Sbjct: 902 cacaaattatacaaaaacat 921
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>gb|AC144564.12| Medicago truncatula clone mth2-17n4, complete sequence
          Length = 130660

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    aattatacaaaaacattatt 52
             ||||||||||||||||||||
Sbjct: 65461 aattatacaaaaacattatt 65442
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>gb|AC182019.3| Felis catus clone RP86-75P21, complete sequence
          Length = 58123

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   catttccagccccttttaac 231
             ||||||||||||||||||||
Sbjct: 32127 catttccagccccttttaac 32146
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>emb|AL023875.2|HS1044O17 Human DNA sequence from clone RP5-1044O17 on chromosome Xp11.3-11.4
             Contains the 5' end of a novel gene and a CpG island,
             complete sequence
          Length = 122325

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    attatacaaaaacattatta 53
             ||||||||||||||||||||
Sbjct: 37749 attatacaaaaacattatta 37768
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>gb|AC016045.8|AC016045 Homo sapiens chromosome 15 clone RP11-96N2 map 15q21, complete sequence
          Length = 164868

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    ttatacaaaaacattattat 54
             ||||||||||||||||||||
Sbjct: 81683 ttatacaaaaacattattat 81702
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>gb|AC012512.7| Homo sapiens BAC clone RP11-561O7 from 2, complete sequence
          Length = 179460

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    atgattcaaattaaatgtct 110
             ||||||||||||||||||||
Sbjct: 70708 atgattcaaattaaatgtct 70689
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>gb|AC012069.10| Homo sapiens BAC clone RP11-300D24 from 2, complete sequence
          Length = 149337

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    ttatgtaacccatacaatca 70
             ||||||||||||||||||||
Sbjct: 78920 ttatgtaacccatacaatca 78939
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>emb|BX005383.8| Zebrafish DNA sequence from clone DKEYP-19E1 in linkage group 25,
             complete sequence
          Length = 142728

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 23    cagtttcacaaattatacaaaaacatta 50
             |||||| |||||||||||||||| ||||
Sbjct: 25022 cagttttacaaattatacaaaaaaatta 24995
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>emb|AL928537.12| Mouse DNA sequence from clone RP23-236E7 on chromosome 2, complete
              sequence
          Length = 190808

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    gaaaaacatttccagcccct 225
              ||||||||||||||||||||
Sbjct: 168380 gaaaaacatttccagcccct 168399
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>emb|AL954868.6| Zebrafish DNA sequence from clone CH211-254N4 in linkage group 8,
             complete sequence
          Length = 194224

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   ttacaaaacacaaacatatc 251
             ||||||||||||||||||||
Sbjct: 39942 ttacaaaacacaaacatatc 39961
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>dbj|AP001988.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-76A17, complete
            sequence
          Length = 141796

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   aaattatacaaaaacattat 51
            ||||||||||||||||||||
Sbjct: 7054 aaattatacaaaaacattat 7035
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>dbj|AP000923.5| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-752D5, complete
              sequences
          Length = 170973

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     aaattatacaaaaacattat 51
              ||||||||||||||||||||
Sbjct: 162192 aaattatacaaaaacattat 162173
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>emb|AL928789.4| Mouse DNA sequence from clone RP23-435F21 on chromosome 2, complete
              sequence
          Length = 202887

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     catatgattcaaattaaatg 107
              ||||||||||||||||||||
Sbjct: 194803 catatgattcaaattaaatg 194822


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,500,366
Number of Sequences: 3902068
Number of extensions: 4500366
Number of successful extensions: 106785
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106632
Number of HSP's gapped (non-prelim): 146
length of query: 380
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 358
effective length of database: 17,147,199,772
effective search space: 6138697518376
effective search space used: 6138697518376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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