| Clone Name | rbaet24e02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein Length = 1225 Score = 718 bits (362), Expect = 0.0 Identities = 374/378 (98%) Strand = Plus / Minus Query: 7 aacaactttgctggatttgcacaacaacgagcagtactacacaacaactgagcactgatg 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1199 aacaactttgctggatttgcacaacaacgagcagtactacacaacaactgagcactgatg 1140 Query: 67 agattacatacaagtcctctgtctgggttcaggtgaatacagagcaagagcaagagtagc 126 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1139 agattacatacaagtcctctgtctgggttcaggtgaatacagagcaagagcaagagtagt 1080 Query: 127 acatcaaacttggaagacaaattggaattccacggtaacacggacgatgggaagagaggg 186 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1079 acatcaaacttggaagacaaattggaattccacggtaacagggacgatgggaagagaggg 1020 Query: 187 ccgcccccatcagaaagaaattcactcagaacacgcagtttgctcttcgggttgggatgg 246 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1019 ccgcccccatcagaaagaaattcactcagaacacgcagtttgctcttcgggttgggatgg 960 Query: 247 catctttctttgtagcagcagcttaggacttggtcttgaatgggatcgctctgatgacca 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 959 catctttctttgtagcagcagcttaggacttggtcttgaatgggatcgctctgatgacca 900 Query: 307 cctggtggtagatggcggccagcgcggcgccgatgaaggggccgacccaaaaaatccagt 366 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 899 cctggtggtagatggcggccagcgcggcgccgatgaaggggccgacccagaagatccagt 840 Query: 367 ggtctgaccaggcgtgct 384 |||||||||||||||||| Sbjct: 839 ggtctgaccaggcgtgct 822
>gb|BT017668.1| Zea mays clone EL01N0441H09.c mRNA sequence Length = 698 Score = 127 bits (64), Expect = 3e-26 Identities = 91/100 (91%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 ||||||| |||||||| ||||||| |||||||||||||||||| |||||||| ||||||| Sbjct: 425 tcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccga 366 Query: 340 tgaaggggccgacccaaaaaatccagtggtctgaccaggc 379 |||||||||||||||| || ||||||||||| | |||||| Sbjct: 365 tgaaggggccgacccagaagatccagtggtcagcccaggc 326
>gb|AY243800.1| Zea mays plasma membrane intrinsic protein (PIP1-1) mRNA, complete cds Length = 1086 Score = 127 bits (64), Expect = 3e-26 Identities = 91/100 (91%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 ||||||| |||||||| ||||||| |||||||||||||||||| |||||||| ||||||| Sbjct: 856 tcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccga 797 Query: 340 tgaaggggccgacccaaaaaatccagtggtctgaccaggc 379 |||||||||||||||| || ||||||||||| | |||||| Sbjct: 796 tgaaggggccgacccagaagatccagtggtcagcccaggc 757
>emb|X82633.1|ZMTRAPRO Z.mays mRNA for transmembrane protein Length = 1169 Score = 127 bits (64), Expect = 3e-26 Identities = 91/100 (91%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 ||||||| |||||||| ||||||| |||||||||||||||||| |||||||| ||||||| Sbjct: 913 tcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccga 854 Query: 340 tgaaggggccgacccaaaaaatccagtggtctgaccaggc 379 |||||||||||||||| || ||||||||||| | |||||| Sbjct: 853 tgaaggggccgacccagaagatccagtggtcagcccaggc 814
>gb|BT018400.1| Zea mays clone EL01N0323H01.d mRNA sequence Length = 1154 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Minus Query: 264 gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcg 323 |||||||| ||| || ||||||| ||||| || ||||||| |||||||||||||||||| Sbjct: 834 gcagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggca 775 Query: 324 gccagcgcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 ||||| |||||||||||||||||||||||||| || ||||| ||||| Sbjct: 774 gccagggcggcgccgatgaaggggccgacccagaagatccaatggtc 728
>gb|AF326488.1|AF326488 Zea mays plasma membrane integral protein ZmPIP1-4 mRNA, complete cds Length = 1153 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Minus Query: 264 gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcg 323 |||||||| ||| || ||||||| ||||| || ||||||| |||||||||||||||||| Sbjct: 984 gcagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggca 925 Query: 324 gccagcgcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 ||||| |||||||||||||||||||||||||| || ||||| ||||| Sbjct: 924 gccagggcggcgccgatgaaggggccgacccagaagatccaatggtc 878
>gb|AF326487.1|AF326487 Zea mays plasma membrane integral protein ZmPIP1-3 mRNA, complete cds Length = 1296 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Minus Query: 264 gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcg 323 |||||||| ||| || ||||||| ||||| || ||||||| |||||||||||||||||| Sbjct: 979 gcagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggca 920 Query: 324 gccagcgcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 ||||| |||||||||||||||||||||||||| || ||||| ||||| Sbjct: 919 gccagggcggcgccgatgaaggggccgacccagaagatccaatggtc 873
>gb|AY103580.1| Zea mays PCO072544 mRNA sequence Length = 1633 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Minus Query: 264 gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcg 323 |||||||| ||| || ||||||| ||||| || ||||||| |||||||||||||||||| Sbjct: 1308 gcagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggca 1249 Query: 324 gccagcgcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 ||||| |||||||||||||||||||||||||| || ||||| ||||| Sbjct: 1248 gccagggcggcgccgatgaaggggccgacccagaagatccaatggtc 1202
>gb|DQ207683.1| Zea mays cultivar inbred line Mo17 IDP251 marker Length = 824 Score = 113 bits (57), Expect = 4e-22 Identities = 90/101 (89%) Strand = Plus / Plus Query: 264 gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcg 323 |||||||| ||| || ||||||| ||||| || ||||||| |||||||||||||||||| Sbjct: 244 gcagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggca 303 Query: 324 gccagcgcggcgccgatgaaggggccgacccaaaaaatcca 364 ||||| |||||||||||||||||||||||||| || ||||| Sbjct: 304 gccagggcggcgccgatgaaggggccgacccagaagatcca 344
>gb|DQ207682.1| Zea mays cultivar B73 IDP251 marker Length = 763 Score = 113 bits (57), Expect = 4e-22 Identities = 90/101 (89%) Strand = Plus / Minus Query: 264 gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcg 323 |||||||| ||| || ||||||| ||||| || ||||||| |||||||||||||||||| Sbjct: 533 gcagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggca 474 Query: 324 gccagcgcggcgccgatgaaggggccgacccaaaaaatcca 364 ||||| |||||||||||||||||||||||||| || ||||| Sbjct: 473 gccagggcggcgccgatgaaggggccgacccagaagatcca 433
>gb|AF131201.1| Zea mays plasma membrane MIP protein (pip1-2) mRNA, complete cds Length = 1280 Score = 109 bits (55), Expect = 7e-21 Identities = 94/107 (87%) Strand = Plus / Minus Query: 264 gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcg 323 |||||||| ||| || ||||||| ||||| |||||||||| |||||||||||||||||| Sbjct: 935 gcagcttaagacctgctcttgaacgggatggctctgatgatcacctggtggtagatggca 876 Query: 324 gccagcgcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 ||||| || ||||| ||||||||||||||||| || ||||| ||||| Sbjct: 875 gccagggcagcgccaatgaaggggccgacccagaagatccaatggtc 829
>emb|AJ310639.1|HVU310639 Hordeum vulgare partial pip1 gene for putative aquaporin Length = 1291 Score = 97.6 bits (49), Expect = 3e-17 Identities = 55/57 (96%) Strand = Plus / Minus Query: 308 ctggtggtagatggcggccagcgcggcgccgatgaaggggccgacccaaaaaatcca 364 |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 1291 ctggtggtagatggcggccagcgcggcgccgatgaaggggccgacccagaagatcca 1235 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtggtctgaccaggcgtgct 384 |||||||||||||||||||| Sbjct: 680 gtggtctgaccaggcgtgct 661
>gb|AY170841.1| Axonopus compressus plasma membrane MIP protein mRNA, partial cds Length = 423 Score = 97.6 bits (49), Expect = 3e-17 Identities = 91/105 (86%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 ||||||| ||||| || ||||||| ||||||||||||||||||||| || || ||||| | Sbjct: 412 tcttgaacgggatggccctgatgatcacctggtggtagatggcggctagggcagcgccaa 353 Query: 340 tgaaggggccgacccaaaaaatccagtggtctgaccaggcgtgct 384 |||||||||||||||| || ||||| ||||| ||||||||||| Sbjct: 352 tgaaggggccgacccagaagatccaatggtcattccaggcgtgct 308
>gb|U87981.1|SBU87981 Sorghum bicolor membrane intrinsic protein (Mip1) mRNA, partial cds Length = 539 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Minus Query: 265 cagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcgg 324 ||||||| ||| || ||||||| ||||| || ||||||| |||||||||||||||||| | Sbjct: 359 cagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggcag 300 Query: 325 ccagcgcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 |||| || || || ||||||||||||||||| || ||||| ||||| Sbjct: 299 ccagggcagcaccaatgaaggggccgacccagaagatccaatggtc 254
>emb|AJ224327.1|OSAJ4327 Oryza sativa mRNA for aquaporin, complete CDS Length = 1139 Score = 87.7 bits (44), Expect = 2e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggcc 326 ||||| ||| || |||||||||||||||| ||||||| |||||||||||||||||| ||| Sbjct: 896 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 837 Query: 327 agcgcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 || || ||||| | |||||| || ||||| || ||||| ||||| Sbjct: 836 agggcagcgccaacgaagggaccaacccagaagatccaatggtc 793
>dbj|AK104658.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D06, full insert sequence Length = 1128 Score = 87.7 bits (44), Expect = 2e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggcc 326 ||||| ||| || |||||||||||||||| ||||||| |||||||||||||||||| ||| Sbjct: 929 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 870 Query: 327 agcgcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 || || ||||| | |||||| || ||||| || ||||| ||||| Sbjct: 869 agggcagcgccaacgaagggaccaacccagaagatccaatggtc 826
>dbj|AK103807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147A07, full insert sequence Length = 1205 Score = 87.7 bits (44), Expect = 2e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggcc 326 ||||| ||| || |||||||||||||||| ||||||| |||||||||||||||||| ||| Sbjct: 984 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 925 Query: 327 agcgcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 || || ||||| | |||||| || ||||| || ||||| ||||| Sbjct: 924 agggcagcgccaacgaagggaccaacccagaagatccaatggtc 881
>dbj|AK061769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C05, full insert sequence Length = 1136 Score = 87.7 bits (44), Expect = 2e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggcc 326 ||||| ||| || |||||||||||||||| ||||||| |||||||||||||||||| ||| Sbjct: 929 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 870 Query: 327 agcgcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 || || ||||| | |||||| || ||||| || ||||| ||||| Sbjct: 869 agggcagcgccaacgaagggaccaacccagaagatccaatggtc 826
>gb|AF022737.1|AF022737 Oryza sativa transmembrane protein mRNA, complete cds Length = 1140 Score = 87.7 bits (44), Expect = 2e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggcc 326 ||||| ||| || |||||||||||||||| ||||||| |||||||||||||||||| ||| Sbjct: 924 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 865 Query: 327 agcgcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 || || ||||| | |||||| || ||||| || ||||| ||||| Sbjct: 864 agggcagcgccaacgaagggaccaacccagaagatccaatggtc 821
>dbj|AB009665.1| Oryza sativa (japonica cultivar-group) mRNA for water channel protein, complete cds Length = 1116 Score = 87.7 bits (44), Expect = 2e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggcc 326 ||||| ||| || |||||||||||||||| ||||||| |||||||||||||||||| ||| Sbjct: 927 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 868 Query: 327 agcgcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 || || ||||| | |||||| || ||||| || ||||| ||||| Sbjct: 867 agggcagcgccaacgaagggaccaacccagaagatccaatggtc 824
>ref|XM_473480.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 849 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 |||||||||| || || |||||||||||||||||||||||||| || || || ||||| | Sbjct: 838 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 779 Query: 340 tgaaggggccgacccaaaaaatccagtggtc 370 |||||||||| ||||| || ||||| ||||| Sbjct: 778 tgaaggggccaacccagaagatccaatggtc 748
>dbj|AK104736.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D02, full insert sequence Length = 1163 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 |||||||||| || || |||||||||||||||||||||||||| || || || ||||| | Sbjct: 915 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 856 Query: 340 tgaaggggccgacccaaaaaatccagtggtc 370 |||||||||| ||||| || ||||| ||||| Sbjct: 855 tgaaggggccaacccagaagatccaatggtc 825
>dbj|AK098849.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E16, full insert sequence Length = 1164 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 |||||||||| || || |||||||||||||||||||||||||| || || || ||||| | Sbjct: 916 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 857 Query: 340 tgaaggggccgacccaaaaaatccagtggtc 370 |||||||||| ||||| || ||||| ||||| Sbjct: 856 tgaaggggccaacccagaagatccaatggtc 826
>dbj|AK065188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E02, full insert sequence Length = 1167 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 |||||||||| || || |||||||||||||||||||||||||| || || || ||||| | Sbjct: 918 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 859 Query: 340 tgaaggggccgacccaaaaaatccagtggtc 370 |||||||||| ||||| || ||||| ||||| Sbjct: 858 tgaaggggccaacccagaagatccaatggtc 828
>dbj|AK058323.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B07, full insert sequence Length = 1462 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 |||||||||| || || |||||||||||||||||||||||||| || || || ||||| | Sbjct: 1214 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 1155 Query: 340 tgaaggggccgacccaaaaaatccagtggtc 370 |||||||||| ||||| || ||||| ||||| Sbjct: 1154 tgaaggggccaacccagaagatccaatggtc 1124
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 83.8 bits (42), Expect = 4e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggcc 326 ||||| ||| || |||||||||||||||| ||||||| |||||||||||||||||| ||| Sbjct: 27065653 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 27065594 Query: 327 agcgcggcgccgatgaaggggccgacccaaaaaatcca 364 || || ||||| | |||||| || ||||| || ||||| Sbjct: 27065593 agggcagcgccaacgaagggaccaacccagaagatcca 27065556 Score = 65.9 bits (33), Expect = 9e-08 Identities = 72/85 (84%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 ||||||| ||||| |||||||| |||||| |||||||||||| ||||| || || |||| Sbjct: 35369403 tcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgctccga 35369344 Query: 340 tgaaggggccgacccaaaaaatcca 364 |||| || || ||||| |||||||| Sbjct: 35369343 tgaacggaccaacccagaaaatcca 35369319
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 83.8 bits (42), Expect = 4e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggcc 326 ||||| ||| || |||||||||||||||| ||||||| |||||||||||||||||| ||| Sbjct: 37302 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 37243 Query: 327 agcgcggcgccgatgaaggggccgacccaaaaaatcca 364 || || ||||| | |||||| || ||||| || ||||| Sbjct: 37242 agggcagcgccaacgaagggaccaacccagaagatcca 37205
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 83.8 bits (42), Expect = 4e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggcc 326 ||||| ||| || |||||||||||||||| ||||||| |||||||||||||||||| ||| Sbjct: 118855 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 118796 Query: 327 agcgcggcgccgatgaaggggccgacccaaaaaatcca 364 || || ||||| | |||||| || ||||| || ||||| Sbjct: 118795 agggcagcgccaacgaagggaccaacccagaagatcca 118758
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 |||||||||| || || |||||||||||||||||||||||||| || || || ||||| | Sbjct: 28669 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 28610 Query: 340 tgaaggggccgacccaaaaaatcca 364 |||||||||| ||||| || ||||| Sbjct: 28609 tgaaggggccaacccagaagatcca 28585
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 |||||||||| || || |||||||||||||||||||||||||| || || || ||||| | Sbjct: 28021443 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 28021384 Query: 340 tgaaggggccgacccaaaaaatcca 364 |||||||||| ||||| || ||||| Sbjct: 28021383 tgaaggggccaacccagaagatcca 28021359
>ref|XM_468463.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1319 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 ||||||| ||||| |||||||| |||||| |||||||||||| ||||| || || |||| Sbjct: 1008 tcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgctccga 949 Query: 340 tgaaggggccgacccaaaaaatccagtggtc 370 |||| || || ||||| |||||||||||||| Sbjct: 948 tgaacggaccaacccagaaaatccagtggtc 918
>dbj|AK102174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086K14, full insert sequence Length = 1318 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 ||||||| ||||| |||||||| |||||| |||||||||||| ||||| || || |||| Sbjct: 1007 tcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgctccga 948 Query: 340 tgaaggggccgacccaaaaaatccagtggtc 370 |||| || || ||||| |||||||||||||| Sbjct: 947 tgaacggaccaacccagaaaatccagtggtc 917
>dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds Length = 1285 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 ||||||| |||||||| ||||| |||||| ||||||||| || |||||||| ||||||| Sbjct: 945 tcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccga 886 Query: 340 tgaaggggccgacccaaaaaatccagtggtc 370 |||| || || ||||| || ||||||||||| Sbjct: 885 tgaacggtcccacccagaagatccagtggtc 855
>dbj|AB016623.1| Oryza sativa gene for RWC-3, complete cds Length = 1403 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 ||||||| ||||| |||||||| |||||| |||||||||||| ||||| || || |||| Sbjct: 985 tcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgctccga 926 Query: 340 tgaaggggccgacccaaaaaatccagtggtc 370 |||| || || ||||| |||||||||||||| Sbjct: 925 tgaacggaccaacccagaaaatccagtggtc 895
>dbj|AB009309.2| Hordeum vulgare HvPIP1;5 mRNA, complete cds Length = 1147 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 294 gctctgatgaccacctggtggtagatggcggccagcgcggcgccgatgaaggggccgacc 353 |||||||||| |||||||||||||| ||| ||||| |||||||| | ||||||||| ||| Sbjct: 927 gctctgatgatcacctggtggtagacggctgccagggcggcgccaacgaaggggcccacc 868 Query: 354 caaaaaatccagtggtc 370 || || ||||| ||||| Sbjct: 867 cagaagatccaatggtc 851
>gb|AF366564.1| Triticum aestivum aquaporin PIP1 (Pip1) mRNA, complete cds Length = 1248 Score = 69.9 bits (35), Expect = 6e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 ||||||| ||||| || ||||| |||||| |||||||||||| |||||||| || |||| Sbjct: 930 tcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcaccga 871 Query: 340 tgaaggggccgacccaaaaaatccagtggtc 370 |||| || || ||||| || ||||||||||| Sbjct: 870 tgaacggaccaacccagaagatccagtggtc 840
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 65.9 bits (33), Expect = 9e-08 Identities = 72/85 (84%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 ||||||| ||||| |||||||| |||||| |||||||||||| ||||| || || |||| Sbjct: 29951 tcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgctccga 29892 Query: 340 tgaaggggccgacccaaaaaatcca 364 |||| || || ||||| |||||||| Sbjct: 29891 tgaacggaccaacccagaaaatcca 29867
>dbj|AB029325.1| Oryza sativa gene for water channel protein RWC3, promoter region and complete cds Length = 5325 Score = 65.9 bits (33), Expect = 9e-08 Identities = 72/85 (84%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 ||||||| ||||| |||||||| |||||| |||||||||||| ||||| || || |||| Sbjct: 4906 tcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgctccga 4847 Query: 340 tgaaggggccgacccaaaaaatcca 364 |||| || || ||||| |||||||| Sbjct: 4846 tgaacggaccaacccagaaaatcca 4822
>emb|AJ271796.1|ZMA271796 Zea mays mRNA for plasma membrane intrinsic protein (pip4 gene) Length = 1364 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 311 gtggtagatggcggccagcgcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 ||||||||||||||| || || || |||||||||||||| ||||| || ||||||||||| Sbjct: 906 gtggtagatggcggcaagagcagcaccgatgaaggggccaacccagaagatccagtggtc 847
>gb|AF326489.1|AF326489 Zea mays plasma membrane integral protein ZmPIP1-5 mRNA, complete cds Length = 1338 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 311 gtggtagatggcggccagcgcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 ||||||||||||||| || || || |||||||||||||| ||||| || ||||||||||| Sbjct: 897 gtggtagatggcggcaagagcagcaccgatgaaggggccaacccagaagatccagtggtc 838
>gb|AY107675.1| Zea mays PCO112712 mRNA sequence Length = 791 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 311 gtggtagatggcggccagcgcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 ||||||||||||||| || || || |||||||||||||| ||||| || ||||||||||| Sbjct: 330 gtggtagatggcggcaagagcagcaccgatgaaggggccaacccagaagatccagtggtc 271
>gb|AY611006.1| Xerophyta humilis isolate HC398 PIP1 aquaporin mRNA, partial cds Length = 502 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 282 ttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccgatg 341 ||||| ||||| ||||||||||| ||||||||||| | || ||||| || || |||||| Sbjct: 176 ttgaaggggattgctctgatgacgacctggtggtacagcgcagccagtgcagctccgatg 117 Query: 342 aaggggccgacccaaaaaatccagtggtc 370 || || || ||||| |||||||| ||||| Sbjct: 116 aatggcccaacccagaaaatccaatggtc 88
>gb|AF141643.1|AF141643 Vitis berlandieri x Vitis rupestris putative aquaporin PIP1-1 (PIP1-1) mRNA, complete cds Length = 1115 Score = 58.0 bits (29), Expect = 2e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 274 acttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcgg 333 |||||| |||||| || || ||||||||||||||||||||||| | || || || |||| Sbjct: 887 acttggacttgaagggaatggctctgatgaccacctggtggtataaagctgctagtgcgg 828 Query: 334 cgccgatgaaggggccgacccaaaaaatccagtggtc 370 | || ||||| || || ||||| || ||||||||||| Sbjct: 827 ccccaatgaatggtcccacccagaagatccagtggtc 791
>emb|Y08962.1|OSTRAMBPR O.sativa mRNA for transmembrane protein Length = 1179 Score = 56.0 bits (28), Expect = 9e-05 Identities = 76/92 (82%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 |||||||||| || || ||||| ||| |||||||||| ||||| | || || | || | Sbjct: 930 tcttgaatggaattgccctgataaccccctggtggtaaatggcaacaagggcccccccca 871 Query: 340 tgaaggggccgacccaaaaaatccagtggtct 371 | ||||||||||||||||||||||| |||||| Sbjct: 870 ttaaggggccgacccaaaaaatccaatggtct 839
>gb|AF188843.1|AF188843 Vitis vinifera cultivar Pinot Noir plasma membrane aquaporin (PIP1a) mRNA, complete cds Length = 1129 Score = 56.0 bits (28), Expect = 9e-05 Identities = 73/88 (82%) Strand = Plus / Minus Query: 277 tggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgc 336 |||||||||||||||| |||||||| || | ||||||||| | ||| || || || || | Sbjct: 907 tggtcttgaatgggatggctctgattactatctggtggtacaaggcagcaagagcagctc 848 Query: 337 cgatgaaggggccgacccaaaaaatcca 364 | |||||||| || ||||| |||||||| Sbjct: 847 caatgaagggtcccacccagaaaatcca 820
>gb|U77297.1|OSU77297 Oryza sativa transmembrane protein mRNA, complete cds Length = 1179 Score = 56.0 bits (28), Expect = 9e-05 Identities = 76/92 (82%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 |||||||||| || || ||||| ||| |||||||||| ||||| | || || | || | Sbjct: 930 tcttgaatggaattgccctgataaccccctggtggtaaatggcaacaagggcccccccca 871 Query: 340 tgaaggggccgacccaaaaaatccagtggtct 371 | ||||||||||||||||||||||| |||||| Sbjct: 870 ttaaggggccgacccaaaaaatccaatggtct 839
>emb|AJ849322.1| Populus tremula x Populus tremuloides mRNA for putative plasma membrane intrinsic protein (pip1.2 gene) Length = 1124 Score = 54.0 bits (27), Expect = 3e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339 ||||||| || || ||||||||||| | ||||||||||| ||||| || || || || | Sbjct: 931 tcttgaaaggaatggctctgatgactatctggtggtagacagcggcaagagcagctccaa 872 Query: 340 tgaaggggccgacccaaaaaatccagtggtc 370 |||| ||||| ||||| || ||||||||||| Sbjct: 871 tgaaagggccaacccagaagatccagtggtc 841
>emb|AJ314584.1|POC314584 Posidonia oceanica mRNA for putative plasma membrane intrinsic protein (pip1a gene) Length = 1139 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 278 ggtcttgaatgggatcgctctgatgaccacctggtggtagat 319 |||||||||||| || ||||||||||| | |||||||||||| Sbjct: 874 ggtcttgaatggaattgctctgatgactatctggtggtagat 833
>emb|AJ001292.1|CPPIPA2 Craterostigma plantagineum mRNA for major intrinsic protein PIPa2 Length = 1189 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 321 gcggccagcgcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 ||||| ||||| ||||||||||| || ||||||||||| | ||||||||| Sbjct: 880 gcggcgagcgctgcgccgatgaatggtccgacccaaaatacccagtggtc 831
>gb|DQ149581.1| Xerophyta humilis PIP1 aquaporin mRNA, complete cds Length = 1262 Score = 50.1 bits (25), Expect = 0.005 Identities = 73/89 (82%) Strand = Plus / Minus Query: 282 ttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccgatg 341 ||||| ||||| ||||||||||| ||||||||||| | || ||||| || || |||||| Sbjct: 936 ttgaaggggattgctctgatgacgacctggtggtacagcgcagccagtgcagctccgatg 877 Query: 342 aaggggccgacccaaaaaatccagtggtc 370 || || || ||||| || ||||| ||||| Sbjct: 876 aatggcccaacccagaatatccaatggtc 848
>gb|AF141898.1|AF141898 Vitis berlandieri x Vitis rupestris putative aquaporin PIP1-2 (PIP1-2) mRNA, complete cds Length = 1154 Score = 48.1 bits (24), Expect = 0.021 Identities = 69/84 (82%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccgat 340 |||||||||||| |||||||| || | ||||||||| | ||| || || || || || || Sbjct: 911 cttgaatgggatggctctgattactatctggtggtacaaggcagcaagagcagctccaat 852 Query: 341 gaaggggccgacccaaaaaatcca 364 |||||| || ||||| |||||||| Sbjct: 851 gaagggtccaacccagaaaatcca 828
>gb|AY547266.2| Ipomoea nil aquaporin-like protein (AQP1) mRNA, complete cds Length = 1189 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggta 316 |||||||||||| |||||||| || ||||||||||| Sbjct: 937 cttgaatgggatggctctgatcacaacctggtggta 902
>ref|XM_473219.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 873 Score = 46.1 bits (23), Expect = 0.083 Identities = 53/63 (84%) Strand = Plus / Minus Query: 308 ctggtggtagatggcggccagcgcggcgccgatgaaggggccgacccaaaaaatccagtg 367 |||||||||| |||||| | ||||||||||||| ||| || ||||| || |||||||| Sbjct: 816 ctggtggtaggcggcggcgatggcggcgccgatgaggggccccacccagaagatccagtg 757 Query: 368 gtc 370 ||| Sbjct: 756 gtc 754
>ref|NM_001003130.1| Canis familiaris aquaporin 1 (Colton blood group) (AQP1), mRNA Length = 945 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Minus Query: 336 ccgatgaaggggccgacccaaaaaatccagtggtc 370 |||||||| || |||||||| |||||||||||||| Sbjct: 693 ccgatgaacggcccgacccagaaaatccagtggtc 659
>ref|XM_850474.1| PREDICTED: Canis familiaris aquaporin 1 (AQP1), mRNA Length = 945 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Minus Query: 336 ccgatgaaggggccgacccaaaaaatccagtggtc 370 |||||||| || |||||||| |||||||||||||| Sbjct: 693 ccgatgaacggcccgacccagaaaatccagtggtc 659
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 46.1 bits (23), Expect = 0.083 Identities = 23/23 (100%) Strand = Plus / Plus Query: 317 gatggcggccagcgcggcgccga 339 ||||||||||||||||||||||| Sbjct: 310343 gatggcggccagcgcggcgccga 310365
>emb|AJ843992.1| Plantago major partial mRNA for aquaporin 2 (aqp2 gene) Length = 1089 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Minus Query: 274 acttggtcttgaatgggatcgctctgatgaccacc 308 ||||| ||||||||||||| |||||||| |||||| Sbjct: 847 acttgttcttgaatgggatagctctgatcaccacc 813
>gb|AF180528.1|AF180528 Canis familiaris water channel aquaporin-1 mRNA, partial cds Length = 477 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Minus Query: 336 ccgatgaaggggccgacccaaaaaatccagtggtc 370 |||||||| || |||||||| |||||||||||||| Sbjct: 341 ccgatgaacggcccgacccagaaaatccagtggtc 307
>emb|AL772318.6| Mouse DNA sequence from clone RP23-77I17 on chromosome 4, complete sequence Length = 249534 Score = 46.1 bits (23), Expect = 0.083 Identities = 26/27 (96%) Strand = Plus / Minus Query: 84 tctgtctgggttcaggtgaatacagag 110 ||||||||||| ||||||||||||||| Sbjct: 225070 tctgtctgggtacaggtgaatacagag 225044
>dbj|AB011374.1| Canis familiaris aquaporin1 mRNA for AQP-CHIP, partial cds Length = 273 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Minus Query: 336 ccgatgaaggggccgacccaaaaaatccagtggtc 370 |||||||| || |||||||| |||||||||||||| Sbjct: 233 ccgatgaacggcccgacccagaaaatccagtggtc 199
>dbj|AB011373.1| Canis familiaris aquaporin1 mRNA for AQP-CHIP, complete cds Length = 945 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Minus Query: 336 ccgatgaaggggccgacccaaaaaatccagtggtc 370 |||||||| || |||||||| |||||||||||||| Sbjct: 693 ccgatgaacggcccgacccagaaaatccagtggtc 659
>emb|X95640.1|BOMIPBTCP B.oleracea mRNA for transmembrane channel protein (mipB) Length = 1114 Score = 44.1 bits (22), Expect = 0.33 Identities = 64/78 (82%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccgat 340 |||||||||||| ||||||||||| | | |||||| | || || ||||| || ||||| Sbjct: 867 cttgaatgggatggctctgatgactatcacgtggtaaagagcagcaagcgcagcaccgat 808 Query: 341 gaaggggccgacccaaaa 358 ||| || ||||||||||| Sbjct: 807 gaatggtccgacccaaaa 790
>emb|AL031227.1|DMC66A1 Drosophila melanogaster cosmid 66A1 Length = 34127 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 301 tgaccacctggtggtagatggc 322 |||||||||||||||||||||| Sbjct: 9156 tgaccacctggtggtagatggc 9135 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 301 tgaccacctggtggtagatggc 322 |||||||||||||||||||||| Sbjct: 5054 tgaccacctggtggtagatggc 5033
>gb|AC023747.4| Drosophila melanogaster X BAC RP98-38L1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167097 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 301 tgaccacctggtggtagatggc 322 |||||||||||||||||||||| Sbjct: 34675 tgaccacctggtggtagatggc 34654
>ref|NM_131946.3| Drosophila melanogaster CG12184-RA (CG12184), mRNA Length = 3292 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 301 tgaccacctggtggtagatggc 322 |||||||||||||||||||||| Sbjct: 2313 tgaccacctggtggtagatggc 2292
>gb|AY051507.1| Drosophila melanogaster GH15731 full length cDNA Length = 2897 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 301 tgaccacctggtggtagatggc 322 |||||||||||||||||||||| Sbjct: 1897 tgaccacctggtggtagatggc 1876
>emb|AJ699398.2| Chenopodium rubrum mRNA for aquaporin PIP1 (PIP1 gene) Length = 1163 Score = 44.1 bits (22), Expect = 0.33 Identities = 37/42 (88%) Strand = Plus / Minus Query: 275 cttggtcttgaatgggatcgctctgatgaccacctggtggta 316 ||||| |||||||||||| |||||||| || | ||||||||| Sbjct: 969 cttggacttgaatgggatggctctgataacaatctggtggta 928
>gb|AY107589.1| Zea mays PCO085320 mRNA sequence Length = 569 Score = 44.1 bits (22), Expect = 0.33 Identities = 34/38 (89%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtg 367 ||||||||||||| ||||||||||| || |||||||| Sbjct: 209 gcggcgccgatgagtgggccgacccagaatatccagtg 172
>gb|AE003431.5| Drosophila melanogaster chromosome X, section 15 of 74 of the complete sequence Length = 310993 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 301 tgaccacctggtggtagatggc 322 |||||||||||||||||||||| Sbjct: 239024 tgaccacctggtggtagatggc 239045
>gb|AY243802.1| Zea mays aquaporin (PIP2-5) mRNA, complete cds Length = 1104 Score = 42.1 bits (21), Expect = 1.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 |||||||||||||| || || ||||| || ||||||||||| Sbjct: 782 gcggcgccgatgaatggacccacccagaagatccagtggtc 742
>emb|AJ849323.1| Populus tremula x Populus tremuloides mRNA for putative plasma membrane intrinsic protein (pip1.1 gene) Length = 943 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 339 atgaaggggccgacccaaaaaatccagtg 367 ||||||||||| ||||| ||||||||||| Sbjct: 888 atgaaggggccaacccagaaaatccagtg 860
>gb|AC153823.5| Mus musculus 10 BAC RP23-11M21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210101 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 acatcaaacttggaagacaaa 147 ||||||||||||||||||||| Sbjct: 24157 acatcaaacttggaagacaaa 24177
>gb|AF130975.1|AF130975 Zea mays plasma membrane intrinsic protein (pip2-5) mRNA, complete cds Length = 1207 Score = 42.1 bits (21), Expect = 1.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 |||||||||||||| || || ||||| || ||||||||||| Sbjct: 837 gcggcgccgatgaatggacccacccagaagatccagtggtc 797
>gb|AF139814.1|AF139814 Triticum aestivum plasma membrane intrinsic protein 1 (PIP1) mRNA, complete cds Length = 1283 Score = 42.1 bits (21), Expect = 1.3 Identities = 48/57 (84%) Strand = Plus / Minus Query: 308 ctggtggtagatggcggccagcgcggcgccgatgaaggggccgacccaaaaaatcca 364 ||||||||||| ||| || | ||| |||||||| | |||||||||||| || ||||| Sbjct: 890 ctggtggtagaaggccgcgatcgccgcgccgatcatggggccgacccagaagatcca 834
>gb|AC153943.3| Mus musculus 10 BAC RP24-408O23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 171960 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 acatcaaacttggaagacaaa 147 ||||||||||||||||||||| Sbjct: 121183 acatcaaacttggaagacaaa 121203
>gb|AF366565.1| Triticum aestivum aquaporin PIP2 (Pip2) mRNA, complete cds Length = 1071 Score = 42.1 bits (21), Expect = 1.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggtc 370 |||||||||||||| ||||| ||||| || ||||| ||||| Sbjct: 792 gcggcgccgatgaacgggccaacccagaagatccactggtc 752
>dbj|AB002149.1| Nicotiana excelsior mRNA for water channel protein, complete cds Length = 1064 Score = 42.1 bits (21), Expect = 1.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 276 ttggtcttgaatgggatcgctctgatgaccacctggtggta 316 |||||||||||||| || |||||||||| | ||||||||| Sbjct: 890 ttggtcttgaatggaatggctctgatgattatctggtggta 850
>dbj|AB002147.1| Nicotiana excelsior mRNA for water channel protein, complete cds Length = 1112 Score = 42.1 bits (21), Expect = 1.3 Identities = 78/97 (80%) Strand = Plus / Minus Query: 274 acttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcgg 333 |||||| ||| |||||||| || ||||| |||||||| ||||| | || || || || | Sbjct: 901 acttggacttaaatgggattgccctgatcaccacctgttggtacagagctgctagtgctg 842 Query: 334 cgccgatgaaggggccgacccaaaaaatccagtggtc 370 | || ||||| || || ||||| |||||||||||||| Sbjct: 841 ctccaatgaaaggtccaacccagaaaatccagtggtc 805
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 315 tagatggcggccagcgcggcgccgatga 342 ||||| ||||||||| |||||||||||| Sbjct: 3446908 tagatcgcggccagcccggcgccgatga 3446881
>ref|NM_116008.2| Arabidopsis thaliana PIP1A; water channel AT3G61430 (PIP1A) mRNA, complete cds Length = 1254 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 339 atgaaggggccgacccaaaaaatccagtggtc 370 ||||||||||| |||||||| | ||||||||| Sbjct: 974 atgaaggggccaacccaaaacacccagtggtc 943
>ref|NM_130159.2| Arabidopsis thaliana PIP1B; water channel AT2G45960 (PIP1B) mRNA, complete cds Length = 1259 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 988 cttgaatgggatggctctgatgac 965
>gb|DQ235182.1| Solanum tuberosum clone 163E01 major intrinsic protein 2-like mRNA, complete cds Length = 1277 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 336 ccgatgaaggggccgacccaaaaaatccagtg 367 |||||||| || |||||||| ||||||||||| Sbjct: 840 ccgatgaatggcccgacccagaaaatccagtg 809
>ref|XM_550604.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1086 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggcgccgatgaaggggccga 351 |||||||||||||||||||| Sbjct: 987 ggcgccgatgaaggggccga 968
>ref|XM_521983.1| PREDICTED: Pan troglodytes similar to expressed sequence AI841794 (LOC466584), mRNA Length = 1269 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tgctggatttgcacaacaac 34 |||||||||||||||||||| Sbjct: 407 tgctggatttgcacaacaac 426
>ref|NM_187092.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1242 Score = 40.1 bits (20), Expect = 5.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 901 gcggcgccgacgaacgggccgacccagaagatccaatggt 862
>ref|XM_507363.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1047_A06.117 mRNA Length = 1257 Score = 40.1 bits (20), Expect = 5.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 903 gcggcgccgacgaacgggccgacccagaagatccaatggt 864
>ref|XM_506304.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1047_A06.117 mRNA Length = 1298 Score = 40.1 bits (20), Expect = 5.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 904 gcggcgccgacgaacgggccgacccagaagatccaatggt 865
>ref|NM_001005210.1| Homo sapiens leucine rich repeat containing 55 (LRRC55), mRNA Length = 3797 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tgctggatttgcacaacaac 34 |||||||||||||||||||| Sbjct: 554 tgctggatttgcacaacaac 573
>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence Length = 136866 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggcgccgatgaaggggccga 351 |||||||||||||||||||| Sbjct: 82946 ggcgccgatgaaggggccga 82927
>gb|AF499725.1| Thellungiella halophila plasma membrane intrinsic protein 1B-like protein mRNA, complete cds Length = 833 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 671 cttgaatgggattgctctgatgac 648
>emb|CR339052.6| Zebrafish DNA sequence from clone CH211-218E6 in linkage group 10, complete sequence Length = 127879 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 cagaaagaaattcactcaga 216 |||||||||||||||||||| Sbjct: 53978 cagaaagaaattcactcaga 53997
>gb|AC007528.5| Homo sapiens 12 BAC RP11-473N11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188451 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 cagagcaagagcaagagtag 125 |||||||||||||||||||| Sbjct: 155822 cagagcaagagcaagagtag 155841
>gb|AY333929.1| Pringlea antiscorbutica putative transmembrane protein mRNA, partial cds Length = 380 Score = 40.1 bits (20), Expect = 5.1 Identities = 77/96 (80%) Strand = Plus / Minus Query: 275 cttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggc 334 |||| ||||||| || || ||||||||||| | |||||| |||| ||||| | || || Sbjct: 292 cttgctcttgaaaggaatggctctgatgacaatctggtgatagagtgcggctaaagctgc 233 Query: 335 gccgatgaaggggccgacccaaaaaatccagtggtc 370 || ||||| || |||||||| |||||||| ||||| Sbjct: 232 tccaatgaatggtccgacccagaaaatccaatggtc 197
>emb|AL117377.18|HSJ1037B9 Human DNA sequence from clone RP5-1037B9 on chromosome 20p12.1-13 Contains STSs, GSSs and a putative CpG island, complete sequence Length = 82183 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cacatcaaacttggaagaca 145 |||||||||||||||||||| Sbjct: 72891 cacatcaaacttggaagaca 72872
>emb|Z17424.1|ATORFA Arabidopsis thaliana mRNA for PIP1b protein Length = 1064 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 908 cttgaatgggatggctctgatgac 885
>emb|Y18312.1|STU18312 Solanum tuberosum mRNA for major intrinsic protein 2 Length = 1214 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 336 ccgatgaaggggccgacccaaaaaatccagtg 367 |||||||| || |||||||| ||||||||||| Sbjct: 806 ccgatgaatggcccgacccagaaaatccagtg 775
>emb|X95639.1|BOMIPATCP B.oleracea mRNA for transmembrane channel protein (mipA) Length = 1104 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 886 cttgaatgggatggctctgatgac 863
>gb|AY091254.1| Arabidopsis thaliana putative aquaporin protein (At2g45960) mRNA, complete cds Length = 892 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 849 cttgaatgggatggctctgatgac 826
>emb|X75881.1|ATPIP1A A.thaliana mRNA for plasma membrane intrinsic protein 1a Length = 1107 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 339 atgaaggggccgacccaaaaaatccagtggtc 370 ||||||||||| |||||||| | ||||||||| Sbjct: 842 atgaaggggccaacccaaaacacccagtggtc 811
>emb|X68293.1|ATRNATPR A.thaliana mRNA for transmembrane protein A Length = 1105 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 903 cttgaatgggatggctctgatgac 880
>gb|AY063931.1| Arabidopsis thaliana putative aquaporin, plasma membrane intrinsic protein 1B (At2g45960) mRNA, complete cds Length = 1077 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 909 cttgaatgggatggctctgatgac 886
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 gatggcggccagcgcggcgc 336 |||||||||||||||||||| Sbjct: 539763 gatggcggccagcgcggcgc 539782
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 cccccatcagaaagaaattcactc 213 ||||||||||||| |||||||||| Sbjct: 1961051 cccccatcagaaacaaattcactc 1961028
>emb|AJ289701.1|VFA289701 Vicia faba mRNA for aquaporin (aq1 gene) Length = 995 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 339 atgaaggggccgacccaaaaaatccagtggtc 370 ||||||||||| |||||||| | ||||||||| Sbjct: 878 atgaaggggccaacccaaaacacccagtggtc 847
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 317 gatggcggccagcgcggcgccgat 340 |||||| ||||||||||||||||| Sbjct: 1468545 gatggccgccagcgcggcgccgat 1468568
>gb|AC182472.3| Pan troglodytes BAC clone CH251-394C9 from chromosome 19, complete sequence Length = 165954 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 catctttctttgtagcagcagctt 270 |||||||| ||||||||||||||| Sbjct: 108793 catctttcattgtagcagcagctt 108770
>dbj|AK127591.1| Homo sapiens cDNA FLJ45686 fis, clone FCBBF3012443 Length = 3797 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tgctggatttgcacaacaac 34 |||||||||||||||||||| Sbjct: 554 tgctggatttgcacaacaac 573
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 tggcggccagcgcggcgccg 338 |||||||||||||||||||| Sbjct: 4507898 tggcggccagcgcggcgccg 4507879
>gb|AY097398.1| Arabidopsis thaliana AT3g61430/F2A19_30 mRNA, complete cds Length = 861 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 339 atgaaggggccgacccaaaaaatccagtggtc 370 ||||||||||| |||||||| | ||||||||| Sbjct: 791 atgaaggggccaacccaaaacacccagtggtc 760
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 aaaaatccagtggtctgacc 375 |||||||||||||||||||| Sbjct: 937743 aaaaatccagtggtctgacc 937724
>gb|AC004665.3| Arabidopsis thaliana chromosome 2 clone F4I18 map CIC02E07, complete sequence Length = 101647 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 15226 cttgaatgggatggctctgatgac 15249
>gb|AC016493.14| Homo sapiens chromosome 18, clone RP11-58G13, complete sequence Length = 163936 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ttggaagacaaattggaatt 155 |||||||||||||||||||| Sbjct: 159892 ttggaagacaaattggaatt 159873
>gb|AC079064.6| Homo sapiens chromosome 11, clone RP11-485O14, complete sequence Length = 164009 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 catcagaaagaaattcactcagaa 217 ||||||||| |||||||||||||| Sbjct: 52709 catcagaaaaaaattcactcagaa 52732
>gb|AC023577.6| Homo sapiens chromosome 18, clone RP11-645D5, complete sequence Length = 166503 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ttggaagacaaattggaatt 155 |||||||||||||||||||| Sbjct: 50150 ttggaagacaaattggaatt 50131
>gb|AY058113.1| Arabidopsis thaliana AT3g61430/F2A19_30 mRNA, complete cds Length = 1092 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 339 atgaaggggccgacccaaaaaatccagtggtc 370 ||||||||||| |||||||| | ||||||||| Sbjct: 858 atgaaggggccaacccaaaacacccagtggtc 827
>dbj|AK222086.1| Arabidopsis thaliana mRNA for aquaporin, partial cds, clone: RAFL22-84-C08 Length = 318 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 111 cttgaatgggatggctctgatgac 88
>gb|AY049238.1| Arabidopsis thaliana clone RAFL08-10-H13(R13205), mRNA sequence Length = 1913 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 909 cttgaatgggatggctctgatgac 886
>gb|AF299051.1|AF299051 Brassica oleracea aquaporin PIP1b2 mRNA, complete cds Length = 1101 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 868 cttgaatgggatggctctgatgac 845
>gb|AF299050.1|AF299050 Brassica oleracea aquaporin PIP1b1 mRNA, complete cds Length = 1084 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 885 cttgaatgggatggctctgatgac 862
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggcgccgatgaaggggccga 351 |||||||||||||||||||| Sbjct: 1762730 ggcgccgatgaaggggccga 1762711
>emb|BX820173.1|CNS0A8G3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS86ZH06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1084 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 889 cttgaatgggatggctctgatgac 866
>emb|BX819664.1|CNS0A8JV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS13ZG09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 679 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 522 cttgaatgggatggctctgatgac 499
>emb|BX820969.1|CNS0A7WJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH87ZA07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1036 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 894 cttgaatgggatggctctgatgac 871
>emb|BX819791.1|CNS0A7WA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS2ZA01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1060 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 881 cttgaatgggatggctctgatgac 858
>emb|BX824874.1|CNS0A5T5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZH01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 946 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 339 atgaaggggccgacccaaaaaatccagtggtc 370 ||||||||||| |||||||| | ||||||||| Sbjct: 729 atgaaggggccaacccaaaacacccagtggtc 698
>emb|BX824209.1|CNS0A5OV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZB01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1026 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 339 atgaaggggccgacccaaaaaatccagtggtc 370 ||||||||||| |||||||| | ||||||||| Sbjct: 816 atgaaggggccaacccaaaacacccagtggtc 785
>emb|BX823595.1|CNS0A5AA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS55ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1059 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 339 atgaaggggccgacccaaaaaatccagtggtc 370 ||||||||||| |||||||| | ||||||||| Sbjct: 837 atgaaggggccaacccaaaacacccagtggtc 806
>dbj|AB029446.1| Oryza sativa (indica cultivar-group) rwc-2 mRNA for water channel protein, partial cds Length = 880 Score = 40.1 bits (20), Expect = 5.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 467 gcggcgccgacgaacgggccgacccagaagatccattggt 428
>gb|AC011500.7| Homo sapiens chromosome 19 clone CTB-60E11, complete sequence Length = 200430 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 catctttctttgtagcagcagctt 270 |||||||| ||||||||||||||| Sbjct: 139931 catctttcattgtagcagcagctt 139908
>gb|AF154641.1| Nicotiana tabacum clone PR16 mRNA sequence Length = 1100 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 336 ccgatgaaggggccgacccaaaaaatccagtg 367 ||||||||||| || ||||| ||||||||||| Sbjct: 822 ccgatgaagggacccacccagaaaatccagtg 791
>gb|AY957387.1| Pseudomonas stutzeri DnrE (dnrE) gene, complete cds; NarL-like (narL) and NarX-like (narX) genes, complete sequence; NarK (narK), NarM (narM), NarG (narG), NarH (narH), NarJ (narJ), and NarI (narI) genes, complete cds; and unknown gene Length = 15150 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggcgccgatgaaggggccga 351 |||||||||||||||||||| Sbjct: 5753 ggcgccgatgaaggggccga 5734
>gb|AY088439.1| Arabidopsis thaliana clone 6690 mRNA, complete sequence Length = 1234 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 339 atgaaggggccgacccaaaaaatccagtggtc 370 ||||||||||| |||||||| | ||||||||| Sbjct: 974 atgaaggggccaacccaaaacacccagtggtc 943
>gb|AY048294.1| Arabidopsis thaliana At2g45960/F4I18.6 mRNA, complete cds Length = 1052 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 909 cttgaatgggatggctctgatgac 886
>gb|AF133530.1|AF133530 Mesembryanthemum crystallinum water channel protein MipH (MipH) mRNA, complete cds Length = 1347 Score = 40.1 bits (20), Expect = 5.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 309 tggtggtagatggcggccagcgcggcgccgatgaaggggccgacccaaaaaatcca 364 ||||||||||||||||| | || || || ||||| || |||||||| |||||||| Sbjct: 884 tggtggtagatggcggcgatggcagccccaatgaacggtccgacccagaaaatcca 829
>gb|AF266760.1|AF266760 Vicia faba plasma membrane aquaporin mRNA, complete cds Length = 920 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 339 atgaaggggccgacccaaaaaatccagtggtc 370 ||||||||||| |||||||| | ||||||||| Sbjct: 837 atgaaggggccaacccaaaacacccagtggtc 806
>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0679C08 Length = 156266 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggcgccgatgaaggggccga 351 |||||||||||||||||||| Sbjct: 87879 ggcgccgatgaaggggccga 87860
>emb|AJ243257.1|SNA243257 Streptomyces natalensis plasmid pSNA1 including spda, kora, spdb2 and rep genes Length = 9367 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 tggcggccagcgcggcgccg 338 |||||||||||||||||||| Sbjct: 4015 tggcggccagcgcggcgccg 3996
>dbj|AK119656.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-H04, full insert sequence Length = 1216 Score = 40.1 bits (20), Expect = 5.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 901 gcggcgccgacgaacgggccgacccagaagatccaatggt 862
>emb|Z17399.1|ATORFB Arabidopsis thaliana PIP1b gene Length = 2773 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 1547 cttgaatgggatggctctgatgac 1524
>dbj|AK105524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G02, full insert sequence Length = 1451 Score = 40.1 bits (20), Expect = 5.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 495 gcggcgccgacgaacgggccgacccagaagatccaatggt 456
>dbj|AK103970.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B05, full insert sequence Length = 1242 Score = 40.1 bits (20), Expect = 5.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 901 gcggcgccgacgaacgggccgacccagaagatccaatggt 862
>dbj|AK103938.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G03, full insert sequence Length = 1257 Score = 40.1 bits (20), Expect = 5.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 903 gcggcgccgacgaacgggccgacccagaagatccaatggt 864
>dbj|AK072519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128K12, full insert sequence Length = 1298 Score = 40.1 bits (20), Expect = 5.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 904 gcggcgccgacgaacgggccgacccagaagatccaatggt 865
>gb|AF062393.1|AF062393 Oryza sativa aquaporin (PIP2a) mRNA, complete cds Length = 1328 Score = 40.1 bits (20), Expect = 5.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcggcgccgatgaaggggccgacccaaaaaatccagtggt 369 |||||||||| ||| ||||||||||| || ||||| |||| Sbjct: 891 gcggcgccgacgaacgggccgacccagaagatccaatggt 852
>dbj|AP001786.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-176J24, complete sequences Length = 171744 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tgctggatttgcacaacaac 34 |||||||||||||||||||| Sbjct: 92890 tgctggatttgcacaacaac 92909
>gb|DQ151348.1| Petromyzon marinus clone T.D8 variable lymphocyte receptor diversity region (VLR) mRNA, partial cds Length = 534 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tgctggatttgcacaacaac 34 |||||||||||||||||||| Sbjct: 263 tgctggatttgcacaacaac 282
>gb|AF004293.1|AF004293 Brassica rapa aquaporin (MOD) mRNA, complete cds Length = 900 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 867 cttgaatgggatggctctgatgac 844
>gb|L36097.1|CIPMIPB Mesembryanthemum crystallinum aquaporin (mipB) mRNA, complete cds Length = 1217 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 336 ccgatgaaggggccgacccaaaaaatccagtg 367 ||||||||||| || ||||| ||||||||||| Sbjct: 820 ccgatgaagggtccaacccagaaaatccagtg 789
>dbj|AB030695.1| Raphanus sativus PAQ1b mRNA for plasma membrane aquaporin 1b, complete cds Length = 1053 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cttgaatgggatcgctctgatgac 304 |||||||||||| ||||||||||| Sbjct: 870 cttgaatgggatggctctgatgac 847 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,873,779 Number of Sequences: 3902068 Number of extensions: 3873779 Number of successful extensions: 75102 Number of sequences better than 10.0: 150 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 74571 Number of HSP's gapped (non-prelim): 533 length of query: 384 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 362 effective length of database: 17,147,199,772 effective search space: 6207286317464 effective search space used: 6207286317464 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)