ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet24c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, p... 686 0.0
2gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransf... 686 0.0
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 98 2e-17
4emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb... 98 2e-17
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 98 2e-17
6emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E... 98 2e-17
7emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003... 66 9e-08
8emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chr... 44 0.31
9gb|AC098738.2| Mus musculus BAC clone RP23-122F7 from 8, complet... 42 1.2
10ref|XM_664595.1| Plasmodium berghei strain ANKA hypothetical pro... 42 1.2
11gb|AE000783.1| Borrelia burgdorferi B31, complete genome 42 1.2
12gb|AC079750.5| Homo sapiens BAC clone RP11-33L3 from 2, complete... 42 1.2
13dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 1.2
14emb|CT573077.2| Medicago truncatula chromosome 5 clone mth2-43j1... 42 1.2
15gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 42 1.2
16gb|CP000013.1| Borrelia garinii PBi, complete genome 40 4.9
17gb|AC101802.9| Mus musculus chromosome 1, clone RP24-221A4, comp... 40 4.9
18gb|AC005200.1| Homo sapiens chromosome 5, P1 clone 793c5 (LBNL H... 40 4.9
19gb|AY642135.1| Homo sapiens interleukin 5 receptor, alpha (IL5RA... 40 4.9
20gb|AC072048.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 4.9
21gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, compl... 40 4.9
22emb|AJ966296.1| Pisum sativum insertion site for PDR1 retrotrans... 40 4.9
23gb|AC124404.4| Mus musculus BAC clone RP24-371M10 from chromosom... 40 4.9
24gb|AC146052.3| Pan troglodytes BAC clone RP43-75P3 from 7, compl... 40 4.9
25ref|XM_722360.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 4.9
26ref|XM_670572.1| Plasmodium berghei strain ANKA hypothetical pro... 40 4.9
27emb|BX927322.12| Zebrafish DNA sequence from clone CH211-101J8 i... 40 4.9
28emb|AL033376.17|HS278N12 Human DNA sequence from clone RP1-278N1... 40 4.9
29emb|AL021812.1|HSU86H4 Human DNA sequence from clone LL0XNC01-86... 40 4.9
30emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome;... 40 4.9
31emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete se... 40 4.9
32gb|AC163296.2| Mus musculus BAC clone RP23-135F1 from chromosome... 40 4.9
33gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Can... 40 4.9
34emb|BX890576.12| Zebrafish DNA sequence from clone DKEY-203O14 i... 40 4.9
35gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete se... 40 4.9
36gb|AC024938.29| Homo sapiens 3 BAC RP11-485J7 (Roswell Park Canc... 40 4.9
37gb|AC104246.3| Homo sapiens chromosome 8, clone RP11-1073L1, com... 40 4.9
38gb|AC008608.7| Homo sapiens chromosome 5 clone CTB-113I20, compl... 40 4.9
39gb|AF269342.1|AF269342 Staphylococcus epidermidis strain SR1 clo... 40 4.9
40gb|AF269321.1|AF269321 Staphylococcus epidermidis strain SR1 clo... 40 4.9
41gb|AC046174.6| Homo sapiens chromosome 8, clone RP11-621B3, comp... 40 4.9
42gb|AC158573.5| Mus musculus chromosome 8, clone RP23-101F17, com... 40 4.9
43gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, r... 40 4.9
44gb|AC012307.8| Homo sapiens BAC clone RP11-574O17 from 2, comple... 40 4.9
45gb|AC153641.3| Mus musculus 6 BAC RP23-5F24 (Roswell Park Cancer... 40 4.9
46gb|AC153909.5| Mus musculus 6 BAC RP23-190O15 (Roswell Park Canc... 40 4.9
47gb|AC018812.5|AC018812 Homo sapiens chromosome 3 clone RP11-161D... 40 4.9
48gb|AC078842.2|AC078842 Homo sapiens chromosome 7 clone RP11-102G... 40 4.9
49gb|AF270232.1|AF270232 Staphylococcus epidermidis strain SR1 clo... 40 4.9
50gb|AC024060.6| Homo sapiens chromosome 3 clone RP11-97C16 map 3p... 40 4.9
51gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome 40 4.9
52emb|AL844883.15| Zebrafish DNA sequence from clone DKEY-3J22 in ... 40 4.9
53emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in... 40 4.9
54gb|AE003668.5| Drosophila melanogaster chromosome 2L, section 77... 40 4.9
55emb|AL096821.3|CNS00YVG Human chromosome 14 DNA sequence BAC R-6... 40 4.9
56emb|AL132719.4|CNS01DTH Human chromosome 14 DNA sequence BAC R-1... 40 4.9
57gb|AE015927.1| Clostridium tetani E88, complete genome 40 4.9
58emb|BX255921.2| Zebrafish DNA sequence from clone CH211-236K19 i... 40 4.9
59gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete s... 40 4.9
60gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete g... 40 4.9
61dbj|AP005671.2| Homo sapiens genomic DNA, chromosome 18 clone:CT... 40 4.9
62gb|AC131584.7| Mus musculus chromosome 1, clone RP23-215C21, com... 40 4.9
63gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s... 40 4.9
64emb|CR385047.19| Zebrafish DNA sequence from clone DKEY-221N16 i... 40 4.9
65gb|AC022002.5| Homo sapiens chromosome 3 clone RP11-198P17 map 3... 40 4.9
66gb|AC166321.3| Cavia porcellus, clone Cavia porcellus-24949357D4... 40 4.9
67gb|AC153654.4| Mus musculus BAC clone RP23-457N11 from chromosom... 40 4.9
68emb|AL691509.6| Mouse DNA sequence from clone RP23-222A18 on chr... 40 4.9
69emb|AL805968.6| Mouse DNA sequence from clone RP23-424G19 on chr... 40 4.9 
>gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, partial cds
          Length = 983

 Score =  686 bits (346), Expect = 0.0
 Identities = 360/367 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   gacattatgcggtccatggcttttatgatagaaataataaaatgaaaatcataaatgagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 gacattatgcggtccatggcttttatgatagaaataataaaatgaaaatcataaatgagc 915

                                                                       
Query: 61  acgtgagctagcagctcttattcgggacattattcgcnnnnnnngaagtgctcctattcg 120
           |||||||||||||||||||||||||||||||||||||       ||||||||||||||||
Sbjct: 914 acgtgagctagcagctcttattcgggacattattcgcaaaaaaagaagtgctcctattcg 855

                                                                       
Query: 121 ggactataccactctggtacgtggatgctacttggtgaactcaagagcgtaaaagttgaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 ggactataccactctggtacgtggatgctacttggtgaactcaagagcgtaaaagttgaa 795

                                                                       
Query: 181 gaatatgtaggttttcttgatgccaccggtaaatccagcttgtttggctagcctggcaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 gaatatgtaggttttcttgatgccaccggtaaatccagcttgtttggctagcctggcaaa 735

                                                                       
Query: 241 ctccttctccgtcctctgctttgctcccttgaagagcacaaacatgatgatatccaaggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ctccttctccgtcctctgctttgctcccttgaagagcacaaacatgatgatatccaaggt 675

                                                                       
Query: 301 gaatgcatcccgcgctgtgagagacgagtctgggttctccgggaggataccatccacgac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gaatgcatcccgcgctgtgagagacgagtctgggttctccgggaggataccatccacgac 615

                  
Query: 361 gatcacc 367
           |||||||
Sbjct: 614 gatcacc 608
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>gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransferase (HvCOMT) gene,
            complete cds
          Length = 5238

 Score =  686 bits (346), Expect = 0.0
 Identities = 360/367 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1    gacattatgcggtccatggcttttatgatagaaataataaaatgaaaatcataaatgagc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4877 gacattatgcggtccatggcttttatgatagaaataataaaatgaaaatcataaatgagc 4818

                                                                        
Query: 61   acgtgagctagcagctcttattcgggacattattcgcnnnnnnngaagtgctcctattcg 120
            |||||||||||||||||||||||||||||||||||||       ||||||||||||||||
Sbjct: 4817 acgtgagctagcagctcttattcgggacattattcgcaaaaaaagaagtgctcctattcg 4758

                                                                        
Query: 121  ggactataccactctggtacgtggatgctacttggtgaactcaagagcgtaaaagttgaa 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4757 ggactataccactctggtacgtggatgctacttggtgaactcaagagcgtaaaagttgaa 4698

                                                                        
Query: 181  gaatatgtaggttttcttgatgccaccggtaaatccagcttgtttggctagcctggcaaa 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4697 gaatatgtaggttttcttgatgccaccggtaaatccagcttgtttggctagcctggcaaa 4638

                                                                        
Query: 241  ctccttctccgtcctctgctttgctcccttgaagagcacaaacatgatgatatccaaggt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4637 ctccttctccgtcctctgctttgctcccttgaagagcacaaacatgatgatatccaaggt 4578

                                                                        
Query: 301  gaatgcatcccgcgctgtgagagacgagtctgggttctccgggaggataccatccacgac 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4577 gaatgcatcccgcgctgtgagagacgagtctgggttctccgggaggataccatccacgac 4518

                   
Query: 361  gatcacc 367
            |||||||
Sbjct: 4517 gatcacc 4511
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 130/157 (82%)
 Strand = Plus / Minus

                                                                           
Query: 156     tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 215
               ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 5374724 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 5374665

                                                                           
Query: 216     cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 275
               ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 5374664 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 5374605

                                                    
Query: 276     gcacaaacatgatgatatccaaggtgaatgcatcccg 312
               | ||||||||||| ||||||| |||||||| ||||||
Sbjct: 5374604 ggacaaacatgatcatatccatggtgaatgaatcccg 5374568



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 135/169 (79%)
 Strand = Plus / Minus

                                                                           
Query: 147     gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 206
               |||||||  |||||||||| ||||| ||||| ||||||||||||||   |  || |  ||
Sbjct: 5173415 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 5173356

                                                                           
Query: 207     cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 266
               ||||||| ||||  |  ||||| ||| | |||||||| | ||| ||||| |||||  || 
Sbjct: 5173355 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 5173296

                                                                
Query: 267     ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 315
               |||||||||| ||||||| ||| ||||||| |||||||| |||| ||||
Sbjct: 5173295 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 5173247
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>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 105645

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 130/157 (82%)
 Strand = Plus / Minus

                                                                         
Query: 156   tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 215
             ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 46791 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 46732

                                                                         
Query: 216   cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 275
             ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 46731 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 46672

                                                  
Query: 276   gcacaaacatgatgatatccaaggtgaatgcatcccg 312
             | ||||||||||| ||||||| |||||||| ||||||
Sbjct: 46671 ggacaaacatgatcatatccatggtgaatgaatcccg 46635
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 130/157 (82%)
 Strand = Plus / Minus

                                                                           
Query: 156     tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 215
               ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 5374713 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 5374654

                                                                           
Query: 216     cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 275
               ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 5374653 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 5374594

                                                    
Query: 276     gcacaaacatgatgatatccaaggtgaatgcatcccg 312
               | ||||||||||| ||||||| |||||||| ||||||
Sbjct: 5374593 ggacaaacatgatcatatccatggtgaatgaatcccg 5374557



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 135/169 (79%)
 Strand = Plus / Minus

                                                                           
Query: 147     gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 206
               |||||||  |||||||||| ||||| ||||| ||||||||||||||   |  || |  ||
Sbjct: 5173397 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 5173338

                                                                           
Query: 207     cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 266
               ||||||| ||||  |  ||||| ||| | |||||||| | ||| ||||| |||||  || 
Sbjct: 5173337 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 5173278

                                                                
Query: 267     ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 315
               |||||||||| ||||||| ||| ||||||| |||||||| |||| ||||
Sbjct: 5173277 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 5173229
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>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 141841

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 130/157 (82%)
 Strand = Plus / Plus

                                                                         
Query: 156   tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 215
             ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 91084 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 91143

                                                                         
Query: 216   cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 275
             ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 91144 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 91203

                                                  
Query: 276   gcacaaacatgatgatatccaaggtgaatgcatcccg 312
             | ||||||||||| ||||||| |||||||| ||||||
Sbjct: 91204 ggacaaacatgatcatatccatggtgaatgaatcccg 91240
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>emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003_A04 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 124959

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 135/169 (79%)
 Strand = Plus / Plus

                                                                         
Query: 147   gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 206
             |||||||  |||||||||| ||||| ||||| ||||||||||||||   |  || |  ||
Sbjct: 90184 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 90243

                                                                         
Query: 207   cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 266
             ||||||| ||||  |  ||||| ||| | |||||||| | ||| ||||| |||||  || 
Sbjct: 90244 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 90303

                                                              
Query: 267   ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 315
             |||||||||| ||||||| ||| ||||||| |||||||| |||| ||||
Sbjct: 90304 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 90352
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>emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chromosome 2, complete
             sequence
          Length = 220275

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 21    ttttatgatagaaataataaaa 42
             ||||||||||||||||||||||
Sbjct: 96149 ttttatgatagaaataataaaa 96170
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>gb|AC098738.2| Mus musculus BAC clone RP23-122F7 from 8, complete sequence
          Length = 216974

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 32    aaataataaaatgaaaatcataaat 56
             |||| ||||||||||||||||||||
Sbjct: 79608 aaattataaaatgaaaatcataaat 79632
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>ref|XM_664595.1| Plasmodium berghei strain ANKA hypothetical protein (PB108243.00.0)
           partial mRNA
          Length = 634

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 21  ttttatgatagaaataataaaatgaaaat 49
           |||||||| ||| ||||||||||||||||
Sbjct: 111 ttttatgaaagatataataaaatgaaaat 83
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>gb|AE000783.1| Borrelia burgdorferi B31, complete genome
          Length = 910724

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 39     aaaatgaaaatcataaatgag 59
              |||||||||||||||||||||
Sbjct: 751243 aaaatgaaaatcataaatgag 751223
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>gb|AC079750.5| Homo sapiens BAC clone RP11-33L3 from 2, complete sequence
          Length = 103089

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 19    gcttttatgatagaaataata 39
             |||||||||||||||||||||
Sbjct: 46170 gcttttatgatagaaataata 46150
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>dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLM24
          Length = 87487

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 22   tttatgatagaaataataaaa 42
            |||||||||||||||||||||
Sbjct: 9619 tttatgatagaaataataaaa 9639
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>emb|CT573077.2| Medicago truncatula chromosome 5 clone mth2-43j18, COMPLETE SEQUENCE
          Length = 142338

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 36    aataaaatgaaaatcataaat 56
             |||||||||||||||||||||
Sbjct: 57822 aataaaatgaaaatcataaat 57842
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>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 174    agttgaagaatatgtaggttttctt 198
              |||||||||| ||||||||||||||
Sbjct: 313473 agttgaagaaaatgtaggttttctt 313449
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>gb|CP000013.1| Borrelia garinii PBi, complete genome
          Length = 904246

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     aaaatgaaaatcataaatga 58
              ||||||||||||||||||||
Sbjct: 753145 aaaatgaaaatcataaatga 753126
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>gb|AC101802.9| Mus musculus chromosome 1, clone RP24-221A4, complete sequence
          Length = 166975

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    aaaatgaaaatcataaatga 58
             ||||||||||||||||||||
Sbjct: 39628 aaaatgaaaatcataaatga 39647
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>gb|AC005200.1| Homo sapiens chromosome 5, P1 clone 793c5 (LBNL H57), complete sequence
          Length = 79305

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    ttttatgatagaaataataa 40
             ||||||||||||||||||||
Sbjct: 13493 ttttatgatagaaataataa 13512
to top
>gb|AY642135.1| Homo sapiens interleukin 5 receptor, alpha (IL5RA) gene, complete cds
          Length = 43944

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    aataaaatgaaaatcataaa 55
             ||||||||||||||||||||
Sbjct: 15438 aataaaatgaaaatcataaa 15419
to top
>gb|AC072048.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-189E15, complete
              sequence
          Length = 208661

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     agaaataataaaatgaaaat 49
              ||||||||||||||||||||
Sbjct: 130171 agaaataataaaatgaaaat 130152
to top
>gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, complete sequence
          Length = 225321

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    ttgaagagcacaaacatgat 288
              ||||||||||||||||||||
Sbjct: 180691 ttgaagagcacaaacatgat 180672
to top
>emb|AJ966296.1| Pisum sativum insertion site for PDR1 retrotransposon insertion,
           strain JI281, John Innes Pisum Collection Accession JI64
           (Pisum elatius RBIP 64x40)
          Length = 402

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 34  ataataaaatgaaaatcata 53
           ||||||||||||||||||||
Sbjct: 384 ataataaaatgaaaatcata 365
to top
>gb|AC124404.4| Mus musculus BAC clone RP24-371M10 from chromosome 12, complete
             sequence
          Length = 150375

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    tagaaataataaaatgaaaa 48
             ||||||||||||||||||||
Sbjct: 54063 tagaaataataaaatgaaaa 54044
to top
>gb|AC146052.3| Pan troglodytes BAC clone RP43-75P3 from 7, complete sequence
          Length = 152119

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    aaataataaaatgaaaatca 51
             ||||||||||||||||||||
Sbjct: 53944 aaataataaaatgaaaatca 53963
to top
>ref|XM_722360.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06739)
           partial mRNA
          Length = 1143

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 32  aaataataaaatgaaaatcataaatgag 59
           |||||||||||||||||  |||||||||
Sbjct: 702 aaataataaaatgaaaagtataaatgag 729
to top
>ref|XM_670572.1| Plasmodium berghei strain ANKA hypothetical protein (PB000547.00.0)
            partial mRNA
          Length = 2673

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 32   aaataataaaatgaaaatcataaatgag 59
            |||||||||||||||||  |||||||||
Sbjct: 1683 aaataataaaatgaaaaatataaatgag 1710
to top
>emb|BX927322.12| Zebrafish DNA sequence from clone CH211-101J8 in linkage group 21,
            complete sequence
          Length = 110730

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   atagaaataataaaatgaaa 47
            ||||||||||||||||||||
Sbjct: 6531 atagaaataataaaatgaaa 6550
to top
>emb|AL033376.17|HS278N12 Human DNA sequence from clone RP1-278N12 on chromosome 6q25.1-26
             Contains the 5' end of the gene for
             phosphoinositide-binding protein PIP3-E (KIAA0403),
             complete sequence
          Length = 78533

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    aaataataaaatgaaaatcataaa 55
             ||||||||||| ||||||||||||
Sbjct: 12198 aaataataaaaagaaaatcataaa 12221
to top
>emb|AL021812.1|HSU86H4 Human DNA sequence from clone LL0XNC01-86H4 on chromosome X, complete
             sequence
          Length = 45199

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    aaataataaaatgaaaatca 51
             ||||||||||||||||||||
Sbjct: 26937 aaataataaaatgaaaatca 26918
to top
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7
          Length = 349391

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 234    tggcaaactccttctccgtc 253
              ||||||||||||||||||||
Sbjct: 340353 tggcaaactccttctccgtc 340372
to top
>emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 3/4
          Length = 293050

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    taaaatgaaaatcataaatg 57
             ||||||||||||||||||||
Sbjct: 88664 taaaatgaaaatcataaatg 88683
to top
>gb|AC163296.2| Mus musculus BAC clone RP23-135F1 from chromosome 12, complete sequence
          Length = 226483

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    tagaaataataaaatgaaaa 48
             ||||||||||||||||||||
Sbjct: 23725 tagaaataataaaatgaaaa 23706
to top
>gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 125400

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 280    aaacatgatgatatccaagg 299
              ||||||||||||||||||||
Sbjct: 120643 aaacatgatgatatccaagg 120624
to top
>emb|BX890576.12| Zebrafish DNA sequence from clone DKEY-203O14 in linkage group 18,
             complete sequence
          Length = 172599

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 31    gaaataataaaatgaaaatcataa 54
             ||||||||||||||||||| ||||
Sbjct: 96369 gaaataataaaatgaaaataataa 96392



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 31    gaaataataaaatgaaaatcataa 54
             ||||||||||||||||||| ||||
Sbjct: 91914 gaaataataaaatgaaaataataa 91937
to top
>gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete sequence
          Length = 129658

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    acaaacatgatgatatccaa 297
              ||||||||||||||||||||
Sbjct: 111959 acaaacatgatgatatccaa 111978
to top
>gb|AC024938.29| Homo sapiens 3 BAC RP11-485J7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 63332

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    ataataaaatgaaaatcata 53
             ||||||||||||||||||||
Sbjct: 59336 ataataaaatgaaaatcata 59317
to top
>gb|AC104246.3| Homo sapiens chromosome 8, clone RP11-1073L1, complete sequence
          Length = 170284

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     gatagaaataataaaatgaa 46
              ||||||||||||||||||||
Sbjct: 152801 gatagaaataataaaatgaa 152820
to top
>gb|AC008608.7| Homo sapiens chromosome 5 clone CTB-113I20, complete sequence
          Length = 160672

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    ttttatgatagaaataataa 40
             ||||||||||||||||||||
Sbjct: 23672 ttttatgatagaaataataa 23691
to top
>gb|AF269342.1|AF269342 Staphylococcus epidermidis strain SR1 clone step.1002d03 genomic
           sequence
          Length = 3734

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 aaaagttgaagaatatgtag 190
           ||||||||||||||||||||
Sbjct: 177 aaaagttgaagaatatgtag 158
to top
>gb|AF269321.1|AF269321 Staphylococcus epidermidis strain SR1 clone step.1002a08 genomic
            sequence
          Length = 3383

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 171  aaaagttgaagaatatgtag 190
            ||||||||||||||||||||
Sbjct: 2238 aaaagttgaagaatatgtag 2257
to top
>gb|AC046174.6| Homo sapiens chromosome 8, clone RP11-621B3, complete sequence
          Length = 161619

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    gatagaaataataaaatgaa 46
             ||||||||||||||||||||
Sbjct: 41177 gatagaaataataaaatgaa 41196
to top
>gb|AC158573.5| Mus musculus chromosome 8, clone RP23-101F17, complete sequence
          Length = 204567

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     agaaataataaaatgaaaat 49
              ||||||||||||||||||||
Sbjct: 124180 agaaataataaaatgaaaat 124199
to top
>gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, region 38E-38F, BAC clone
             BACR07D17, complete sequence
          Length = 173422

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    aataaaatgaaaatcataaa 55
             ||||||||||||||||||||
Sbjct: 27939 aataaaatgaaaatcataaa 27958
to top
>gb|AC012307.8| Homo sapiens BAC clone RP11-574O17 from 2, complete sequence
          Length = 145918

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    agaaataataaaatgaaaat 49
             ||||||||||||||||||||
Sbjct: 79570 agaaataataaaatgaaaat 79589
to top
>gb|AC153641.3| Mus musculus 6 BAC RP23-5F24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 193417

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    aaataataaaatgaaaatca 51
             ||||||||||||||||||||
Sbjct: 81725 aaataataaaatgaaaatca 81744
to top
>gb|AC153909.5| Mus musculus 6 BAC RP23-190O15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 226538

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     agaaataataaaatgaaaat 49
              ||||||||||||||||||||
Sbjct: 208362 agaaataataaaatgaaaat 208381
to top
>gb|AC018812.5|AC018812 Homo sapiens chromosome 3 clone RP11-161D20 map 3p, complete sequence
          Length = 169199

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     aataaaatgaaaatcataaa 55
              ||||||||||||||||||||
Sbjct: 109012 aataaaatgaaaatcataaa 108993
to top
>gb|AC078842.2|AC078842 Homo sapiens chromosome 7 clone RP11-102G17, complete sequence
          Length = 173844

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 26   tgatagaaataataaaatgaaaat 49
            ||||| ||||||||||||||||||
Sbjct: 3084 tgataaaaataataaaatgaaaat 3061
to top
>gb|AF270232.1|AF270232 Staphylococcus epidermidis strain SR1 clone step.1055e11 genomic
            sequence
          Length = 2995

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 171  aaaagttgaagaatatgtag 190
            ||||||||||||||||||||
Sbjct: 1549 aaaagttgaagaatatgtag 1530
to top
>gb|AC024060.6| Homo sapiens chromosome 3 clone RP11-97C16 map 3p, complete sequence
          Length = 174313

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     aataaaatgaaaatcataaa 55
              ||||||||||||||||||||
Sbjct: 161271 aataaaatgaaaatcataaa 161252
to top
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome
          Length = 2616530

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 171    aaaagttgaagaatatgtag 190
              ||||||||||||||||||||
Sbjct: 226670 aaaagttgaagaatatgtag 226689
to top
>emb|AL844883.15| Zebrafish DNA sequence from clone DKEY-3J22 in linkage group 18,
             complete sequence
          Length = 189984

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 31    gaaataataaaatgaaaatcataa 54
             ||||||||||||||||||| ||||
Sbjct: 93346 gaaataataaaatgaaaataataa 93369



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 31    gaaataataaaatgaaaatcataa 54
             ||||||||||||||||||| ||||
Sbjct: 88900 gaaataataaaatgaaaataataa 88923



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 31    gaaataataaaatgaaaatcataa 54
             ||||||||||||||||||| ||||
Sbjct: 84424 gaaataataaaatgaaaataataa 84447
to top
>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18,
              complete sequence
          Length = 248419

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    cggtaaatccagcttgtttg 226
              ||||||||||||||||||||
Sbjct: 147510 cggtaaatccagcttgtttg 147491
to top
>gb|AE003668.5| Drosophila melanogaster chromosome 2L, section 77 of 83 of the complete
             sequence
          Length = 270158

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    aataaaatgaaaatcataaa 55
             ||||||||||||||||||||
Sbjct: 17753 aataaaatgaaaatcataaa 17772
to top
>emb|AL096821.3|CNS00YVG Human chromosome 14 DNA sequence BAC R-677J5 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209111

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 29   tagaaataataaaatgaaaa 48
            ||||||||||||||||||||
Sbjct: 1709 tagaaataataaaatgaaaa 1728
to top
>emb|AL132719.4|CNS01DTH Human chromosome 14 DNA sequence BAC R-1082A3 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 171505

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     tagaaataataaaatgaaaa 48
              ||||||||||||||||||||
Sbjct: 153269 tagaaataataaaatgaaaa 153288
to top
>gb|AE015927.1| Clostridium tetani E88, complete genome
          Length = 2799251

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     atgatagaaataataaaatg 44
              ||||||||||||||||||||
Sbjct: 940104 atgatagaaataataaaatg 940123
to top
>emb|BX255921.2| Zebrafish DNA sequence from clone CH211-236K19 in linkage group 5,
             complete sequence
          Length = 142918

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    aaataataaaatgaaaatca 51
             ||||||||||||||||||||
Sbjct: 38783 aaataataaaatgaaaatca 38764
to top
>gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete sequence
          Length = 162405

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   ggctagcctggcaaactcct 245
             ||||||||||||||||||||
Sbjct: 87830 ggctagcctggcaaactcct 87811
to top
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome
          Length = 2499279

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 171    aaaagttgaagaatatgtag 190
              ||||||||||||||||||||
Sbjct: 342005 aaaagttgaagaatatgtag 342024
to top
>dbj|AP005671.2| Homo sapiens genomic DNA, chromosome 18 clone:CTD-3096M3, complete
             sequence
          Length = 86000

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   tcccttgaagagcacaaaca 284
             ||||||||||||||||||||
Sbjct: 62557 tcccttgaagagcacaaaca 62538
to top
>gb|AC131584.7| Mus musculus chromosome 1, clone RP23-215C21, complete sequence
          Length = 197346

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   ttgaagagcacaaacatgat 288
             ||||||||||||||||||||
Sbjct: 79901 ttgaagagcacaaacatgat 79882
to top
>gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s DS04217 (D56) and DS00582
             (D85)), complete sequence
          Length = 142799

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    aataaaatgaaaatcataaa 55
             ||||||||||||||||||||
Sbjct: 61596 aataaaatgaaaatcataaa 61577
to top
>emb|CR385047.19| Zebrafish DNA sequence from clone DKEY-221N16 in linkage group 18,
              complete sequence
          Length = 193827

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    cggtaaatccagcttgtttg 226
              ||||||||||||||||||||
Sbjct: 173244 cggtaaatccagcttgtttg 173225
to top
>gb|AC022002.5| Homo sapiens chromosome 3 clone RP11-198P17 map 3p, complete sequence
          Length = 189097

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     aataaaatgaaaatcataaa 55
              ||||||||||||||||||||
Sbjct: 185081 aataaaatgaaaatcataaa 185100
to top
>gb|AC166321.3| Cavia porcellus, clone Cavia porcellus-24949357D4, complete sequence
          Length = 36966

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 33   aataataaaatgaaaatcat 52
            ||||||||||||||||||||
Sbjct: 3622 aataataaaatgaaaatcat 3641
to top
>gb|AC153654.4| Mus musculus BAC clone RP23-457N11 from chromosome 12, complete sequence
          Length = 193547

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     tagaaataataaaatgaaaa 48
              ||||||||||||||||||||
Sbjct: 143301 tagaaataataaaatgaaaa 143282
to top
>emb|AL691509.6| Mouse DNA sequence from clone RP23-222A18 on chromosome 4, complete
            sequence
          Length = 217607

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 32   aaataataaaatgaaaatcataaa 55
            ||||||||||||||||||| ||||
Sbjct: 7170 aaataataaaatgaaaatcttaaa 7193
to top
>emb|AL805968.6| Mouse DNA sequence from clone RP23-424G19 on chromosome 4, complete
              sequence
          Length = 171320

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     atagaaataataaaatgaaa 47
              ||||||||||||||||||||
Sbjct: 159096 atagaaataataaaatgaaa 159077


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,471,506
Number of Sequences: 3902068
Number of extensions: 3471506
Number of successful extensions: 86384
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86075
Number of HSP's gapped (non-prelim): 307
length of query: 367
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 345
effective length of database: 17,147,199,772
effective search space: 5915783921340
effective search space used: 5915783921340
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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