>gb|AC158930.3| Mus musculus chromosome 1, clone RP23-244J9, complete sequence
          Length = 214509

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 101    atgatacaaataaacccccaaagtcc 126
              |||| |||||||||||||||||||||
Sbjct: 110455 atgaaacaaataaacccccaaagtcc 110430

>gb|AF082693.1|AF082693 Fundulus heteroclitus clone FHGA7 lactate dehydrogenase B gene,
           promoter
          Length = 309

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 92  tcgatgatgatgatacaaataa 113
           ||||||||||||||||||||||
Sbjct: 54  tcgatgatgatgatacaaataa 33

>gb|AF082692.1|AF082692 Fundulus heteroclitus clone FHGA6 lactate dehydrogenase B gene,
           promoter
          Length = 315

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 92  tcgatgatgatgatacaaataa 113
           ||||||||||||||||||||||
Sbjct: 54  tcgatgatgatgatacaaataa 33

>gb|AC074310.29| Mus musculus strain C57BL/6J chromosome 1 clone rp23-137i20, complete
              sequence
          Length = 222328

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 101    atgatacaaataaacccccaaagtcc 126
              |||| |||||||||||||||||||||
Sbjct: 197780 atgaaacaaataaacccccaaagtcc 197805

>gb|U59854.1|FHU59854 Fundulus heteroclitus lactate dehydrogenase-B (Ldh-B) gene, 5'UTR
          Length = 1039

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 92  tcgatgatgatgatacaaataa 113
           ||||||||||||||||||||||
Sbjct: 804 tcgatgatgatgatacaaataa 783

>gb|U59853.1|FHU59853 Fundulus heteroclitus lactate dehydrogenase-B (Ldh-B) gene, 5'UTR
          Length = 1041

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 92  tcgatgatgatgatacaaataa 113
           ||||||||||||||||||||||
Sbjct: 806 tcgatgatgatgatacaaataa 785

>gb|U59843.1|FHU59843 Fundulus heteroclitus lactate dehydrogenase-B (Ldh-B) gene, 5'UTR
          Length = 1040

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 92  tcgatgatgatgatacaaataa 113
           ||||||||||||||||||||||
Sbjct: 806 tcgatgatgatgatacaaataa 785

>gb|U59841.1|FHU59841 Fundulus heteroclitus lactate dehydrogenase-B (Ldh-B) gene, 5'UTR
          Length = 1084

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 92  tcgatgatgatgatacaaataa 113
           ||||||||||||||||||||||
Sbjct: 844 tcgatgatgatgatacaaataa 823

>gb|U59837.1|FHU59837 Fundulus heteroclitus lactate dehydrogenase-B (Ldh-B) gene, 5'UTR
          Length = 1042

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 92  tcgatgatgatgatacaaataa 113
           ||||||||||||||||||||||
Sbjct: 808 tcgatgatgatgatacaaataa 787

>gb|U59836.1|FHU59836 Fundulus heteroclitus lactate dehydrogenase-B (Ldh-B) gene, 5'UTR
          Length = 1039

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 92  tcgatgatgatgatacaaataa 113
           ||||||||||||||||||||||
Sbjct: 805 tcgatgatgatgatacaaataa 784

>gb|U59835.1|FHU59835 Fundulus heteroclitus lactate dehydrogenase-B (Ldh-B) gene, 5'UTR
          Length = 1038

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 92  tcgatgatgatgatacaaataa 113
           ||||||||||||||||||||||
Sbjct: 804 tcgatgatgatgatacaaataa 783

>gb|U59834.1|FHU59834 Fundulus heteroclitus lactate dehydrogenase-B (Ldh-B) gene, 5'UTR
          Length = 1037

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 92  tcgatgatgatgatacaaataa 113
           ||||||||||||||||||||||
Sbjct: 802 tcgatgatgatgatacaaataa 781

>gb|U59833.1|FHU59833 Fundulus heteroclitus lactate dehydrogenase-B (Ldh-B) gene, 5'UTR
          Length = 1037

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 92  tcgatgatgatgatacaaataa 113
           ||||||||||||||||||||||
Sbjct: 802 tcgatgatgatgatacaaataa 781

>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01,
             complete sequence
          Length = 160142

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 92    tcgatgatgatgatacaaata 112
             |||||||||||||||||||||
Sbjct: 28388 tcgatgatgatgatacaaata 28408

>gb|U49830.2| Caenorhabditis elegans cosmid C33F10, complete sequence
          Length = 46463

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 93    cgatgatgatgatacaaataa 113
             |||||||||||||||||||||
Sbjct: 44151 cgatgatgatgatacaaataa 44171

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 92       tcgatgatgatgatacaaata 112
                |||||||||||||||||||||
Sbjct: 21435305 tcgatgatgatgatacaaata 21435325

>gb|AE014851.1| Plasmodium falciparum 3D7 chromosome 12, section 8 of 9 of the complete
             sequence
          Length = 251762

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    atgatgatgatacaaataaa 114
             ||||||||||||||||||||
Sbjct: 91207 atgatgatgatacaaataaa 91226

>gb|AY177248.1| Oryctolagus cuniculus whey acidic protein (WAP) gene, upstream
           regulatory region
          Length = 2560

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 75  gagggcatctcgctcgctcg 94
           ||||||||||||||||||||
Sbjct: 755 gagggcatctcgctcgctcg 774

>gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 147560

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    gatgatgatgatacaaataa 113
             ||||||||||||||||||||
Sbjct: 26076 gatgatgatgatacaaataa 26057

>emb|CR937191.1| Single read from an extremity of a cDNA clone made from Aedes
           aegypti total adult females. 5-prime end of clone
           KW0AAB2YK24AAM1 from strain Liverpool of Aedes aegypti
           (yellow fever mosquito)
          Length = 908

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  tcgatgatgatgatacaaat 111
           ||||||||||||||||||||
Sbjct: 318 tcgatgatgatgatacaaat 337

>gb|AC154642.2| Mus musculus BAC clone RP23-277C14 from chromosome 14, complete
             sequence
          Length = 211315

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 54    tacattgcccacagctagggagag 77
             |||||||| |||||||||||||||
Sbjct: 81357 tacattgctcacagctagggagag 81380

>gb|AC079384.26| Homo sapiens 12 BAC RP11-148B3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 180555

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    gatgatgatgatacaaataa 113
             ||||||||||||||||||||
Sbjct: 61129 gatgatgatgatacaaataa 61110

>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      aatccttccatccattcgct 27
              ||||||||||||||||||||
Sbjct: 519053 aatccttccatccattcgct 519034

>emb|BX120013.5| Zebrafish DNA sequence from clone DKEY-76H10, complete sequence
          Length = 170264

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   atgatacaaataaaccccca 120
             ||||||||||||||||||||
Sbjct: 59499 atgatacaaataaaccccca 59480

>ref|XM_634273.1| Dictyostelium discoideum hypothetical protein (DDB0204997), partial
           mRNA
          Length = 1890

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 95  atgatgatgatacaaataa 113
           |||||||||||||||||||
Sbjct: 554 atgatgatgatacaaataa 572

>gb|AC140722.11| Medicago truncatula clone mth2-14e20, complete sequence
          Length = 97982

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    ggctcaattaatttacatt 59
             |||||||||||||||||||
Sbjct: 43665 ggctcaattaatttacatt 43647

>emb|AL731553.12| Human DNA sequence from clone RP11-56M3 on chromosome 10 Contains a
             nudix (nucleoside diphosphate linked moiety X)-type
             pseudogene, complete sequence
          Length = 99089

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    ccttgggctcaattaattt 54
             |||||||||||||||||||
Sbjct: 63002 ccttgggctcaattaattt 62984

>emb|AL589677.6| Human DNA sequence from clone RP11-12P4 on chromosome X, complete
             sequence
          Length = 129422

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 95    atgatgatgatacaaataa 113
             |||||||||||||||||||
Sbjct: 46876 atgatgatgatacaaataa 46858

>emb|AL360236.26| Human DNA sequence from clone RP11-380M3 on chromosome 6 Contains a
             novel pseudogene, part of the KCNQ5 gene for potassium
             voltage-gated channel KQT-like subfamily member 5, and a
             phosphoglycerate mutase 1 (brain) (PGAM1) pseudogene,
             complete sequence
          Length = 154998

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    ccttgggctcaattaattt 54
             |||||||||||||||||||
Sbjct: 42084 ccttgggctcaattaattt 42102

>gb|AC018977.9| Homo sapiens chromosome 10 clone RP11-386C23, complete sequence
          Length = 222810

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 48    ttaatttacattgcccaca 66
             |||||||||||||||||||
Sbjct: 93612 ttaatttacattgcccaca 93630

>emb|AL158077.15| Human DNA sequence from clone RP11-471J7 on chromosome 9 Contains the
             5' end of the SLC24A2 gene for solute carrier family 24
             (sodium/potassium/calcium exchanger), member 2 (NCKX2) and
             a CpG island, complete sequence
          Length = 159900

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 40    gggctcaattaatttacattgcc 62
             ||||| |||||||||||||||||
Sbjct: 90856 gggcttaattaatttacattgcc 90878

>emb|AL109940.18|HSJ421D16 Human DNA sequence from clone RP3-421D16 on chromosome 6q26-27 Contains
             part of the gene for smooth muscle cell associated protein
             2 (SMAP2) or secreted modular calcium binding protein 2
             (SMOC2) and two CpG islands, complete sequence
          Length = 110603

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 57    attgcccacagctagggagaggg 79
             ||||| |||||||||||||||||
Sbjct: 77044 attgctcacagctagggagaggg 77022

>emb|Y18363.1|SDY18363 Streptococcus dysgalactiae subsp. equisimilis genomic sequence with
            vir-regulon like properties, genes nrd, mgc, emm, rel
          Length = 4826

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 66   agctagggagagggcatct 84
            |||||||||||||||||||
Sbjct: 4319 agctagggagagggcatct 4301

>emb|BX294154.1| Pirellula sp. strain 1 complete genome; segment 22/24
          Length = 299050

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 78    ggcatctcgctcgctcgat 96
             |||||||||||||||||||
Sbjct: 67178 ggcatctcgctcgctcgat 67196

>emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chromosome 9; segment 3/5
          Length = 341050

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 95     atgatgatgatacaaataa 113
              |||||||||||||||||||
Sbjct: 152048 atgatgatgatacaaataa 152030

>gb|AC172744.2| Medicago truncatula chromosome 2 BAC clone mth2-33p17, complete
             sequence
          Length = 116124

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 150   acgtacaagtacacatgca 168
             |||||||||||||||||||
Sbjct: 23399 acgtacaagtacacatgca 23417

>emb|AJ937766.1| Uncultured candidate division WS3 bacterium fosmid clone b1dcf5.1.c12
          Length = 38304

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 13    ttccatccattcgctcgtg 31
             |||||||||||||||||||
Sbjct: 29073 ttccatccattcgctcgtg 29091

>gb|U59839.1|FHU59839 Fundulus heteroclitus lactate dehydrogenase-B (Ldh-B) gene, 5'UTR
          Length = 1113

 Score = 38.2 bits (19), Expect = 8.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 92  tcgatgatgatgatacaaataaa 114
           ||||||||||||| |||||||||
Sbjct: 873 tcgatgatgatgacacaaataaa 851


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,688,011
Number of Sequences: 3902068
Number of extensions: 1688011
Number of successful extensions: 117243
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117094
Number of HSP's gapped (non-prelim): 149
length of query: 168
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 146
effective length of database: 17,147,199,772
effective search space: 2503491166712
effective search space used: 2503491166712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)