ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet23h11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ292770.1|ZMA292770 Zea mays mRNA for putative fatty acid longase (fae2 gene) Length = 2018 Score = 141 bits (71), Expect = 2e-30 Identities = 190/229 (82%), Gaps = 3/229 (1%) Strand = Plus / Minus Query: 186 caaccttggacaccttgggaacctccaccgggaatgtgtcgatctcgtccatccaggggt 245 ||||||| || | ||| ||||| ||||||||||| |||| ||||| |||||||||||| Sbjct: 1681 caacctttgaaatctttggaacatccaccgggaagttgtcaatctcatccatccaggggc 1622 Query: 246 tgttctgctccttcgctgggttcactgacctcagtgccttccagacggcgctgttacact 305 | |||| |||| || |||||||| | || ||||||||||||||||||||||| |||| Sbjct: 1621 tcttct---ccttggccgggttcaccgtccggagtgccttccagacggcgctgttgcact 1565 Query: 306 tgaaccccgagccgaacgctatctgccatatcctgtcacgcctcctgatcctcccctttg 365 |||| || || || || || |||||||| |||||||| ||| |||||||||| ||||||| Sbjct: 1564 tgaatccagaaccaaatgcgatctgccagatcctgtcgcgcttcctgatcctaccctttg 1505 Query: 366 cctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgcc 414 |||| |||| |||||||||||||| || |||||| | || |||||||| Sbjct: 1504 cctcagtgtacgccagctcgtaccagagtgagctgcttgatgtgttgcc 1456
>gb|AY109713.2| Zea mays CL1191_1 mRNA sequence Length = 1949 Score = 141 bits (71), Expect = 2e-30 Identities = 190/229 (82%), Gaps = 3/229 (1%) Strand = Plus / Minus Query: 186 caaccttggacaccttgggaacctccaccgggaatgtgtcgatctcgtccatccaggggt 245 ||||||| || | ||| ||||| ||||||||||| |||| ||||| |||||||||||| Sbjct: 1649 caacctttgaaatctttggaacatccaccgggaagttgtcaatctcatccatccaggggc 1590 Query: 246 tgttctgctccttcgctgggttcactgacctcagtgccttccagacggcgctgttacact 305 | |||| |||| || |||||||| | || ||||||||||||||||||||||| |||| Sbjct: 1589 tcttct---ccttggccgggttcaccgtccggagtgccttccagacggcgctgttgcact 1533 Query: 306 tgaaccccgagccgaacgctatctgccatatcctgtcacgcctcctgatcctcccctttg 365 |||| || || || || || |||||||| |||||||| ||| |||||||||| ||||||| Sbjct: 1532 tgaatccagaaccaaatgcgatctgccagatcctgtcgcgcttcctgatcctaccctttg 1473 Query: 366 cctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgcc 414 |||| |||| |||||||||||||| || |||||| | || |||||||| Sbjct: 1472 cctcagtgtacgccagctcgtaccagagtgagctgcttgatgtgttgcc 1424
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 133 bits (67), Expect = 5e-28 Identities = 189/229 (82%), Gaps = 3/229 (1%) Strand = Plus / Minus Query: 186 caaccttggacaccttgggaacctccaccgggaatgtgtcgatctcgtccatccaggggt 245 ||||||| || | ||| ||||| || |||||||| |||| ||||| ||||||||||||| Sbjct: 23227062 caacctttgatatctttggaacttcaaccgggaagttgtcaatctcatccatccaggggt 23227003 Query: 246 tgttctgctccttcgctgggttcactgacctcagtgccttccagacggcgctgttacact 305 | |||| |||||||||| ||||||| ||| ||||||||||| |||||||| |||| Sbjct: 23227002 tcttct---ccttcgctggattcactgtttgcagcgccttccagactgcgctgttgcact 23226946 Query: 306 tgaaccccgagccgaacgctatctgccatatcctgtcacgcctcctgatcctcccctttg 365 |||| || || || || || |||||||| |||||||| ||| |||||||||||||||| | Sbjct: 23226945 tgaaaccagatccaaatgcaatctgccagatcctgtcccgcttcctgatcctccccttcg 23226886 Query: 366 cctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgcc 414 ||||| |||| |||||||| ||||| || |||||| | || |||||||| Sbjct: 23226885 cctcggtgtacgccagctcataccagagtgagctgctcgatgtgttgcc 23226837 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| ||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 8523440 cccttggcctcgatgtaggccagctcgtaccacaccgagctgctcgacgtgttgccgaa 8523382 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| ||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 8419753 cccttggcctcgatgtaggccagctcgtaccacaccgagctgctcgacgtgttgccgaa 8419811 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| ||| |||||||||||||||| ||||||| | |||||||||||||| Sbjct: 8656280 cccttggcctcgacgtacgccagctcgtaccacaccgagctgctcgacgtgttgccgaa 8656338 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| |||||||||||||||||||| ||||||| | |||||||| ||||| Sbjct: 8609328 cccttggcctcgacgtaggccagctcgtaccacaccgagctgctcgacgtgttcccgaa 8609386 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 293 gcgctgttacacttgaaccccgagccgaa 321 |||||||| |||||||||||||| ||||| Sbjct: 8656214 gcgctgttgcacttgaaccccgacccgaa 8656242
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 133 bits (67), Expect = 5e-28 Identities = 189/229 (82%), Gaps = 3/229 (1%) Strand = Plus / Minus Query: 186 caaccttggacaccttgggaacctccaccgggaatgtgtcgatctcgtccatccaggggt 245 ||||||| || | ||| ||||| || |||||||| |||| ||||| ||||||||||||| Sbjct: 61824 caacctttgatatctttggaacttcaaccgggaagttgtcaatctcatccatccaggggt 61765 Query: 246 tgttctgctccttcgctgggttcactgacctcagtgccttccagacggcgctgttacact 305 | |||| |||||||||| ||||||| ||| ||||||||||| |||||||| |||| Sbjct: 61764 tcttct---ccttcgctggattcactgtttgcagcgccttccagactgcgctgttgcact 61708 Query: 306 tgaaccccgagccgaacgctatctgccatatcctgtcacgcctcctgatcctcccctttg 365 |||| || || || || || |||||||| |||||||| ||| |||||||||||||||| | Sbjct: 61707 tgaaaccagatccaaatgcaatctgccagatcctgtcccgcttcctgatcctccccttcg 61648 Query: 366 cctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgcc 414 ||||| |||| |||||||| ||||| || |||||| | || |||||||| Sbjct: 61647 cctcggtgtacgccagctcataccagagtgagctgctcgatgtgttgcc 61599
>ref|NM_196495.1| Oryza sativa (japonica cultivar-group) putative beta-ketoacyl-CoA synthase (OSJNBa0032I20.8), mRNA Length = 1572 Score = 129 bits (65), Expect = 8e-27 Identities = 116/133 (87%) Strand = Plus / Minus Query: 285 tccagacggcgctgttacacttgaaccccgagccgaacgctatctgccatatcctgtcac 344 |||| ||||||||||| ||||||||||| |||||||| || |||||||| | || ||| | Sbjct: 1438 tccacacggcgctgttgcacttgaacccggagccgaaggcgatctgccacacccggtcgc 1379 Query: 345 gcctcctgatcctcccctttgcctcgctgtaggccagctcgtaccacagcgagctgttgg 404 | | ||||||||||||| ||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 1378 cgcgcttgatcctccccttggcctcgcagtaggcgagctcgtaccacagcgagctgctgg 1319 Query: 405 acgtgttgccgaa 417 ||||||||||||| Sbjct: 1318 acgtgttgccgaa 1306
>ref|NM_187760.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1575 Score = 129 bits (65), Expect = 8e-27 Identities = 119/137 (86%) Strand = Plus / Minus Query: 281 gccttccagacggcgctgttacacttgaaccccgagccgaacgctatctgccatatcctg 340 |||||||||||||||||||| |||||||| || ||||||||||| |||||||| | || | Sbjct: 1403 gccttccagacggcgctgttgcacttgaatccggagccgaacgcgatctgccacacccgg 1344 Query: 341 tcacgcctcctgatcctcccctttgcctcgctgtaggccagctcgtaccacagcgagctg 400 || | | |||||||||||| || ||||||| ||||| |||||||||||||||||||||| Sbjct: 1343 tcgccgcgcctgatcctccctttcgcctcgcagtaggacagctcgtaccacagcgagctg 1284 Query: 401 ttggacgtgttgccgaa 417 | |||||||| ||||| Sbjct: 1283 ctcgacgtgttcccgaa 1267
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 129 bits (65), Expect = 8e-27 Identities = 119/137 (86%) Strand = Plus / Minus Query: 281 gccttccagacggcgctgttacacttgaaccccgagccgaacgctatctgccatatcctg 340 |||||||||||||||||||| |||||||| || ||||||||||| |||||||| | || | Sbjct: 3388437 gccttccagacggcgctgttgcacttgaatccggagccgaacgcgatctgccacacccgg 3388378 Query: 341 tcacgcctcctgatcctcccctttgcctcgctgtaggccagctcgtaccacagcgagctg 400 || | | |||||||||||| || ||||||| ||||| |||||||||||||||||||||| Sbjct: 3388377 tcgccgcgcctgatcctccctttcgcctcgcagtaggacagctcgtaccacagcgagctg 3388318 Query: 401 ttggacgtgttgccgaa 417 | |||||||| ||||| Sbjct: 3388317 ctcgacgtgttcccgaa 3388301 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 358 cccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 |||||| |||||| ||||||| ||||||||||| ||||||||| | |||||||||||||| Sbjct: 6271546 ccccttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaa 6271605 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 286 ccagacggcgctgttacacttgaaccccgagccgaa 321 |||||| |||||||| |||||||||||||||||||| Sbjct: 7656824 ccagaccgcgctgttgcacttgaaccccgagccgaa 7656859 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| ||| |||||||||||||||||||||||| || ||||||||||| Sbjct: 7656897 cccttggcctcggcgtacgccagctcgtaccacagcgagctgctgctggtgttgccgaa 7656955 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 acggcgctgttacacttgaaccccgagccgaa 321 ||||||||||| ||||||||||| |||||||| Sbjct: 4253136 acggcgctgttgcacttgaacccggagccgaa 4253105 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Plus Query: 283 cttccagacggcgctgttacacttgaa 309 |||||||||||||||||| |||||||| Sbjct: 6271471 cttccagacggcgctgttgcacttgaa 6271497 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 295 gctgttacacttgaaccccgagccgaacg 323 |||||| |||||||||||||| ||||||| Sbjct: 15048342 gctgttgcacttgaaccccgacccgaacg 15048314 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 295 gctgttacacttgaaccccgagccgaacg 323 |||||| |||||||||||||| ||||||| Sbjct: 15032684 gctgttgcacttgaaccccgacccgaacg 15032712 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 295 gctgttacacttgaaccccgagccgaacg 323 |||||| |||||||||||||| ||||||| Sbjct: 14989447 gctgttgcacttgaaccccgacccgaacg 14989419
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 129 bits (65), Expect = 8e-27 Identities = 119/137 (86%) Strand = Plus / Plus Query: 281 gccttccagacggcgctgttacacttgaaccccgagccgaacgctatctgccatatcctg 340 |||||||||||||||||||| |||||||| || ||||||||||| |||||||| | || | Sbjct: 40777 gccttccagacggcgctgttgcacttgaatccggagccgaacgcgatctgccacacccgg 40836 Query: 341 tcacgcctcctgatcctcccctttgcctcgctgtaggccagctcgtaccacagcgagctg 400 || | | |||||||||||| || ||||||| ||||| |||||||||||||||||||||| Sbjct: 40837 tcgccgcgcctgatcctccctttcgcctcgcagtaggacagctcgtaccacagcgagctg 40896 Query: 401 ttggacgtgttgccgaa 417 | |||||||| ||||| Sbjct: 40897 ctcgacgtgttcccgaa 40913
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 129 bits (65), Expect = 8e-27 Identities = 116/133 (87%) Strand = Plus / Plus Query: 285 tccagacggcgctgttacacttgaaccccgagccgaacgctatctgccatatcctgtcac 344 |||| ||||||||||| ||||||||||| |||||||| || |||||||| | || ||| | Sbjct: 14046781 tccacacggcgctgttgcacttgaacccggagccgaaggcgatctgccacacccggtcgc 14046840 Query: 345 gcctcctgatcctcccctttgcctcgctgtaggccagctcgtaccacagcgagctgttgg 404 | | ||||||||||||| ||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 14046841 cgcgcttgatcctccccttggcctcgcagtaggcgagctcgtaccacagcgagctgctgg 14046900 Query: 405 acgtgttgccgaa 417 ||||||||||||| Sbjct: 14046901 acgtgttgccgaa 14046913 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 286 ccagacggcgctgttacacttgaaccccgagccgaa 321 ||||||||||||||| |||||||| || |||||||| Sbjct: 11266872 ccagacggcgctgttgcacttgaagcctgagccgaa 11266907 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 286 ccagacggcgctgttacacttgaaccccgagccgaa 321 ||||||||||||||| |||||||| || |||||||| Sbjct: 3639004 ccagacggcgctgttgcacttgaagccggagccgaa 3639039 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 373 gtaggccagctcgtaccacagcgagctg 400 |||||| ||||||||||| ||||||||| Sbjct: 3639091 gtaggcgagctcgtaccagagcgagctg 3639118
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 129 bits (65), Expect = 8e-27 Identities = 119/137 (86%) Strand = Plus / Minus Query: 281 gccttccagacggcgctgttacacttgaaccccgagccgaacgctatctgccatatcctg 340 |||||||||||||||||||| |||||||| || ||||||||||| |||||||| | || | Sbjct: 3388548 gccttccagacggcgctgttgcacttgaatccggagccgaacgcgatctgccacacccgg 3388489 Query: 341 tcacgcctcctgatcctcccctttgcctcgctgtaggccagctcgtaccacagcgagctg 400 || | | |||||||||||| || ||||||| ||||| |||||||||||||||||||||| Sbjct: 3388488 tcgccgcgcctgatcctccctttcgcctcgcagtaggacagctcgtaccacagcgagctg 3388429 Query: 401 ttggacgtgttgccgaa 417 | |||||||| ||||| Sbjct: 3388428 ctcgacgtgttcccgaa 3388412 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 358 cccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 |||||| |||||| ||||||| ||||||||||| ||||||||| | |||||||||||||| Sbjct: 6270759 ccccttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaa 6270818 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 286 ccagacggcgctgttacacttgaaccccgagccgaa 321 |||||| |||||||| |||||||||||||||||||| Sbjct: 7654659 ccagaccgcgctgttgcacttgaaccccgagccgaa 7654694 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| ||| |||||||||||||||||||||||| || ||||||||||| Sbjct: 7654732 cccttggcctcggcgtacgccagctcgtaccacagcgagctgctgctggtgttgccgaa 7654790 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 acggcgctgttacacttgaaccccgagccgaa 321 ||||||||||| ||||||||||| |||||||| Sbjct: 4253251 acggcgctgttgcacttgaacccggagccgaa 4253220 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Plus Query: 283 cttccagacggcgctgttacacttgaa 309 |||||||||||||||||| |||||||| Sbjct: 6270684 cttccagacggcgctgttgcacttgaa 6270710 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 295 gctgttacacttgaaccccgagccgaacg 323 |||||| |||||||||||||| ||||||| Sbjct: 15042876 gctgttgcacttgaaccccgacccgaacg 15042848 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 295 gctgttacacttgaaccccgagccgaacg 323 |||||| |||||||||||||| ||||||| Sbjct: 15027218 gctgttgcacttgaaccccgacccgaacg 15027246 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 295 gctgttacacttgaaccccgagccgaacg 323 |||||| |||||||||||||| ||||||| Sbjct: 14983981 gctgttgcacttgaaccccgacccgaacg 14983953
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 129 bits (65), Expect = 8e-27 Identities = 116/133 (87%) Strand = Plus / Plus Query: 285 tccagacggcgctgttacacttgaaccccgagccgaacgctatctgccatatcctgtcac 344 |||| ||||||||||| ||||||||||| |||||||| || |||||||| | || ||| | Sbjct: 62910 tccacacggcgctgttgcacttgaacccggagccgaaggcgatctgccacacccggtcgc 62969 Query: 345 gcctcctgatcctcccctttgcctcgctgtaggccagctcgtaccacagcgagctgttgg 404 | | ||||||||||||| ||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 62970 cgcgcttgatcctccccttggcctcgcagtaggcgagctcgtaccacagcgagctgctgg 63029 Query: 405 acgtgttgccgaa 417 ||||||||||||| Sbjct: 63030 acgtgttgccgaa 63042
>dbj|AK101377.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033036C04, full insert sequence Length = 2134 Score = 129 bits (65), Expect = 8e-27 Identities = 178/215 (82%), Gaps = 3/215 (1%) Strand = Plus / Minus Query: 186 caaccttggacaccttgggaacctccaccgggaatgtgtcgatctcgtccatccaggggt 245 ||||||| || | ||| ||||| || |||||||| |||| ||||| ||||||||||||| Sbjct: 1752 caacctttgatatctttggaacttcaaccgggaagttgtcaatctcatccatccaggggt 1693 Query: 246 tgttctgctccttcgctgggttcactgacctcagtgccttccagacggcgctgttacact 305 | |||| |||||||||| ||||||| ||| ||||||||||| |||||||| |||| Sbjct: 1692 tcttct---ccttcgctggattcactgtttgcagcgccttccagactgcgctgttgcact 1636 Query: 306 tgaaccccgagccgaacgctatctgccatatcctgtcacgcctcctgatcctcccctttg 365 |||| || || || || || |||||||| |||||||| ||| |||||||||||||||| | Sbjct: 1635 tgaaaccagatccaaatgcaatctgccagatcctgtcccgcttcctgatcctccccttcg 1576 Query: 366 cctcgctgtaggccagctcgtaccacagcgagctg 400 ||||| |||| |||||||| ||||| || |||||| Sbjct: 1575 cctcggtgtacgccagctcataccagagtgagctg 1541
>dbj|AK073016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149L14, full insert sequence Length = 1040 Score = 129 bits (65), Expect = 8e-27 Identities = 116/133 (87%) Strand = Plus / Minus Query: 285 tccagacggcgctgttacacttgaaccccgagccgaacgctatctgccatatcctgtcac 344 |||| ||||||||||| ||||||||||| |||||||| || |||||||| | || ||| | Sbjct: 710 tccacacggcgctgttgcacttgaacccggagccgaaggcgatctgccacacccggtcgc 651 Query: 345 gcctcctgatcctcccctttgcctcgctgtaggccagctcgtaccacagcgagctgttgg 404 | | ||||||||||||| ||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 650 cgcgcttgatcctccccttggcctcgcagtaggcgagctcgtaccacagcgagctgctgg 591 Query: 405 acgtgttgccgaa 417 ||||||||||||| Sbjct: 590 acgtgttgccgaa 578
>dbj|AK064127.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E01, full insert sequence Length = 1408 Score = 129 bits (65), Expect = 8e-27 Identities = 119/137 (86%) Strand = Plus / Minus Query: 281 gccttccagacggcgctgttacacttgaaccccgagccgaacgctatctgccatatcctg 340 |||||||||||||||||||| |||||||| || ||||||||||| |||||||| | || | Sbjct: 971 gccttccagacggcgctgttgcacttgaatccggagccgaacgcgatctgccacacccgg 912 Query: 341 tcacgcctcctgatcctcccctttgcctcgctgtaggccagctcgtaccacagcgagctg 400 || | | |||||||||||| || ||||||| ||||| |||||||||||||||||||||| Sbjct: 911 tcgccgcgcctgatcctccctttcgcctcgcagtaggacagctcgtaccacagcgagctg 852 Query: 401 ttggacgtgttgccgaa 417 | |||||||| ||||| Sbjct: 851 ctcgacgtgttcccgaa 835
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 129 bits (65), Expect = 8e-27 Identities = 116/133 (87%) Strand = Plus / Plus Query: 285 tccagacggcgctgttacacttgaaccccgagccgaacgctatctgccatatcctgtcac 344 |||| ||||||||||| ||||||||||| |||||||| || |||||||| | || ||| | Sbjct: 14055023 tccacacggcgctgttgcacttgaacccggagccgaaggcgatctgccacacccggtcgc 14055082 Query: 345 gcctcctgatcctcccctttgcctcgctgtaggccagctcgtaccacagcgagctgttgg 404 | | ||||||||||||| ||||||| |||||| ||||||||||||||||||||| ||| Sbjct: 14055083 cgcgcttgatcctccccttggcctcgcagtaggcgagctcgtaccacagcgagctgctgg 14055142 Query: 405 acgtgttgccgaa 417 ||||||||||||| Sbjct: 14055143 acgtgttgccgaa 14055155 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 286 ccagacggcgctgttacacttgaaccccgagccgaa 321 ||||||||||||||| |||||||| || |||||||| Sbjct: 11273312 ccagacggcgctgttgcacttgaagcctgagccgaa 11273347 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 286 ccagacggcgctgttacacttgaaccccgagccgaa 321 ||||||||||||||| |||||||| || |||||||| Sbjct: 3638925 ccagacggcgctgttgcacttgaagccggagccgaa 3638960 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 373 gtaggccagctcgtaccacagcgagctg 400 |||||| ||||||||||| ||||||||| Sbjct: 3639012 gtaggcgagctcgtaccagagcgagctg 3639039
>ref|XM_464563.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1929 Score = 125 bits (63), Expect = 1e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 293 gcgctgttacacttgaaccccgagccgaacgctatctgccatatcctgtcacgcctcctg 352 |||||||| ||||||||||| || |||||||| |||||||| | |||||| | |||||| Sbjct: 1550 gcgctgttgcacttgaacccggacccgaacgcgatctgccacaccctgtccctcctcctc 1491 Query: 353 atcctcccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgtt 411 | ||||||||| ||||||||||| |||||||||||||||||||||||| | |||||||| Sbjct: 1490 accctccccttcgcctcgctgtacgccagctcgtaccacagcgagctgctcgacgtgtt 1432
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 125 bits (63), Expect = 1e-25 Identities = 105/119 (88%) Strand = Plus / Plus Query: 293 gcgctgttacacttgaaccccgagccgaacgctatctgccatatcctgtcacgcctcctg 352 |||||||| ||||||||||| || |||||||| |||||||| | |||||| | |||||| Sbjct: 5930677 gcgctgttgcacttgaacccggacccgaacgcgatctgccacaccctgtccctcctcctc 5930736 Query: 353 atcctcccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgtt 411 | ||||||||| ||||||||||| |||||||||||||||||||||||| | |||||||| Sbjct: 5930737 accctccccttcgcctcgctgtacgccagctcgtaccacagcgagctgctcgacgtgtt 5930795 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| |||||| ||||||||||| ||||||||| | |||||||||||||| Sbjct: 30520124 cccttggcctcgacgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaa 30520066
>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056C19 Length = 147739 Score = 125 bits (63), Expect = 1e-25 Identities = 105/119 (88%) Strand = Plus / Plus Query: 293 gcgctgttacacttgaaccccgagccgaacgctatctgccatatcctgtcacgcctcctg 352 |||||||| ||||||||||| || |||||||| |||||||| | |||||| | |||||| Sbjct: 108898 gcgctgttgcacttgaacccggacccgaacgcgatctgccacaccctgtccctcctcctc 108957 Query: 353 atcctcccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgtt 411 | ||||||||| ||||||||||| |||||||||||||||||||||||| | |||||||| Sbjct: 108958 accctccccttcgcctcgctgtacgccagctcgtaccacagcgagctgctcgacgtgtt 109016
>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544H11 Length = 178376 Score = 125 bits (63), Expect = 1e-25 Identities = 105/119 (88%) Strand = Plus / Plus Query: 293 gcgctgttacacttgaaccccgagccgaacgctatctgccatatcctgtcacgcctcctg 352 |||||||| ||||||||||| || |||||||| |||||||| | |||||| | |||||| Sbjct: 160479 gcgctgttgcacttgaacccggacccgaacgcgatctgccacaccctgtccctcctcctc 160538 Query: 353 atcctcccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgtt 411 | ||||||||| ||||||||||| |||||||||||||||||||||||| | |||||||| Sbjct: 160539 accctccccttcgcctcgctgtacgccagctcgtaccacagcgagctgctcgacgtgtt 160597
>dbj|AK067907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127I02, full insert sequence Length = 1929 Score = 125 bits (63), Expect = 1e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 293 gcgctgttacacttgaaccccgagccgaacgctatctgccatatcctgtcacgcctcctg 352 |||||||| ||||||||||| || |||||||| |||||||| | |||||| | |||||| Sbjct: 1550 gcgctgttgcacttgaacccggacccgaacgcgatctgccacaccctgtccctcctcctc 1491 Query: 353 atcctcccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgtt 411 | ||||||||| ||||||||||| |||||||||||||||||||||||| | |||||||| Sbjct: 1490 accctccccttcgcctcgctgtacgccagctcgtaccacagcgagctgctcgacgtgtt 1432
>ref|XM_475915.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1563 Score = 113 bits (57), Expect = 5e-22 Identities = 138/165 (83%) Strand = Plus / Minus Query: 253 ctccttcgctgggttcactgacctcagtgccttccagacggcgctgttacacttgaaccc 312 |||||| || |||||||| |||| || ||| |||| ||||||||||| |||||||| || Sbjct: 1488 ctccttggccgggttcaccgaccggagcgccctccacacggcgctgttgcacttgaagcc 1429 Query: 313 cgagccgaacgctatctgccatatcctgtcacgcctcctgatcctcccctttgcctcgct 372 |||||||| || |||||||| ||||||| | | || |||||| |||||| |||||| Sbjct: 1428 ggagccgaaggcgatctgccacgtcctgtcccccttcttgatccgccccttggcctcggc 1369 Query: 373 gtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 |||||| ||||||||||||||||||||| | |||||||| ||||| Sbjct: 1368 gtaggcgagctcgtaccacagcgagctgctcgacgtgttcccgaa 1324
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 113 bits (57), Expect = 5e-22 Identities = 138/165 (83%) Strand = Plus / Plus Query: 253 ctccttcgctgggttcactgacctcagtgccttccagacggcgctgttacacttgaaccc 312 |||||| || |||||||| |||| || ||| |||| ||||||||||| |||||||| || Sbjct: 40108 ctccttggccgggttcaccgaccggagcgccctccacacggcgctgttgcacttgaagcc 40167 Query: 313 cgagccgaacgctatctgccatatcctgtcacgcctcctgatcctcccctttgcctcgct 372 |||||||| || |||||||| ||||||| | | || |||||| |||||| |||||| Sbjct: 40168 ggagccgaaggcgatctgccacgtcctgtcccccttcttgatccgccccttggcctcggc 40227 Query: 373 gtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 |||||| ||||||||||||||||||||| | |||||||| ||||| Sbjct: 40228 gtaggcgagctcgtaccacagcgagctgctcgacgtgttcccgaa 40272
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 113 bits (57), Expect = 5e-22 Identities = 138/165 (83%) Strand = Plus / Plus Query: 253 ctccttcgctgggttcactgacctcagtgccttccagacggcgctgttacacttgaaccc 312 |||||| || |||||||| |||| || ||| |||| ||||||||||| |||||||| || Sbjct: 28405184 ctccttggccgggttcaccgaccggagcgccctccacacggcgctgttgcacttgaagcc 28405243 Query: 313 cgagccgaacgctatctgccatatcctgtcacgcctcctgatcctcccctttgcctcgct 372 |||||||| || |||||||| ||||||| | | || |||||| |||||| |||||| Sbjct: 28405244 ggagccgaaggcgatctgccacgtcctgtcccccttcttgatccgccccttggcctcggc 28405303 Query: 373 gtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 |||||| ||||||||||||||||||||| | |||||||| ||||| Sbjct: 28405304 gtaggcgagctcgtaccacagcgagctgctcgacgtgttcccgaa 28405348 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 286 ccagacggcgctgttacacttgaaccccgagccgaacgctatctgcca 333 ||||||||||||||| ||||||||||| ||||||||| |||||||| Sbjct: 28059211 ccagacggcgctgttgcacttgaacccgctgccgaacgcgatctgcca 28059258 Score = 46.1 bits (23), Expect = 0.091 Identities = 50/59 (84%) Strand = Plus / Plus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| ||||| ||||||| ||||||||||| | |||||| | |||||||||||||| Sbjct: 28059284 cccttggcctccatgtaggcgagctcgtaccagatggagctgctcgacgtgttgccgaa 28059342
>dbj|AK070754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067B12, full insert sequence Length = 2233 Score = 113 bits (57), Expect = 5e-22 Identities = 138/165 (83%) Strand = Plus / Minus Query: 253 ctccttcgctgggttcactgacctcagtgccttccagacggcgctgttacacttgaaccc 312 |||||| || |||||||| |||| || ||| |||| ||||||||||| |||||||| || Sbjct: 1947 ctccttggccgggttcaccgaccggagcgccctccacacggcgctgttgcacttgaagcc 1888 Query: 313 cgagccgaacgctatctgccatatcctgtcacgcctcctgatcctcccctttgcctcgct 372 |||||||| || |||||||| ||||||| | | || |||||| |||||| |||||| Sbjct: 1887 ggagccgaaggcgatctgccacgtcctgtcccccttcttgatccgccccttggcctcggc 1828 Query: 373 gtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 |||||| ||||||||||||||||||||| | |||||||| ||||| Sbjct: 1827 gtaggcgagctcgtaccacagcgagctgctcgacgtgttcccgaa 1783
>gb|AY108989.1| Zea mays PCO108745 mRNA sequence Length = 625 Score = 97.6 bits (49), Expect = 3e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 281 gccttccagacggcgctgttacacttgaaccccgagccgaacgctatctgccatatcctg 340 |||||||||||||||||||| |||||||| || |||||||| || |||||||| | | | Sbjct: 395 gccttccagacggcgctgttgcacttgaagccggagccgaaggcgatctgccagacgcgg 454 Query: 341 tcacgcctcctgatcctcccctttgcctcgctgtaggccagctcgtaccacagcgagctg 400 || | | ||| ||| | ||||| ||||||| |||||| ||||||||||| ||||||||| Sbjct: 455 tcgcccttccggatgcggcccttggcctcgcagtaggcgagctcgtaccagagcgagctg 514 Query: 401 ttggacgtgttgccgaa 417 |||| ||||||||||| Sbjct: 515 ctggaggtgttgccgaa 531
>gb|AY110123.1| Zea mays CL29782_1 mRNA sequence Length = 932 Score = 83.8 bits (42), Expect = 4e-13 Identities = 103/125 (82%) Strand = Plus / Plus Query: 281 gccttccagacggcgctgttacacttgaaccccgagccgaacgctatctgccatatcctg 340 |||||||||||||||||||| |||||||| || |||||||| || |||||||||| || | Sbjct: 255 gccttccagacggcgctgttgcacttgaagccggagccgaaagcgatctgccatacccgg 314 Query: 341 tcacgcctcctgatcctcccctttgcctcgctgtaggccagctcgtaccacagcgagctg 400 | | | ||||| ||||| ||||||| |||||| ||||||||||| ||||||||| Sbjct: 315 tnnnnnttgcggatccgtcccttggcctcgcagtaggcgagctcgtaccagagcgagctg 374 Query: 401 ttgga 405 |||| Sbjct: 375 ctgga 379
>dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0092H22 Length = 165194 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| ||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 138141 cccttggcctcgatgtaggccagctcgtaccacaccgagctgctcgacgtgttgccgaa 138083 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| ||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 34454 cccttggcctcgatgtaggccagctcgtaccacaccgagctgctcgacgtgttgccgaa 34512
>gb|AC140006.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0090D11, complete sequence Length = 115403 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 358 cccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 |||||| |||||| ||||||| ||||||||||| ||||||||| | |||||||||||||| Sbjct: 110157 ccccttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaa 110216 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Plus Query: 283 cttccagacggcgctgttacacttgaa 309 |||||||||||||||||| |||||||| Sbjct: 110082 cttccagacggcgctgttgcacttgaa 110108
>gb|AC104474.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024O21, complete sequence Length = 155651 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 358 cccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 |||||| |||||| ||||||| ||||||||||| ||||||||| | |||||||||||||| Sbjct: 84754 ccccttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaa 84813 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Plus Query: 283 cttccagacggcgctgttacacttgaa 309 |||||||||||||||||| |||||||| Sbjct: 84679 cttccagacggcgctgttgcacttgaa 84705
>dbj|AK106150.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-H08, full insert sequence Length = 1892 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 358 cccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 |||||| |||||| ||||||| ||||||||||| ||||||||| | |||||||||||||| Sbjct: 1492 ccccttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaa 1433 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Minus Query: 283 cttccagacggcgctgttacacttgaa 309 |||||||||||||||||| |||||||| Sbjct: 1567 cttccagacggcgctgttgcacttgaa 1541
>dbj|AK104714.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H10, full insert sequence Length = 1892 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 358 cccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 |||||| |||||| ||||||| ||||||||||| ||||||||| | |||||||||||||| Sbjct: 1492 ccccttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaa 1433 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Minus Query: 283 cttccagacggcgctgttacacttgaa 309 |||||||||||||||||| |||||||| Sbjct: 1567 cttccagacggcgctgttgcacttgaa 1541
>dbj|AK066587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074H08, full insert sequence Length = 1966 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 358 cccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 |||||| |||||| ||||||| ||||||||||| ||||||||| | |||||||||||||| Sbjct: 1493 ccccttggcctcgatgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaa 1434 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Minus Query: 283 cttccagacggcgctgttacacttgaa 309 |||||||||||||||||| |||||||| Sbjct: 1568 cttccagacggcgctgttgcacttgaa 1542
>gb|AY308830.1| Marchantia polymorpha FAE3 gene, complete cds Length = 10158 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 372 tgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 |||||||||||||||||||||| |||||| |||||||||| ||||| Sbjct: 5476 tgtaggccagctcgtaccacagagagctgctggacgtgtttccgaa 5431 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 293 gcgctgttacacttgaaccccgagccgaacgctatctgcca 333 |||||||||||||| ||||| || ||||| || |||||||| Sbjct: 5555 gcgctgttacacttaaaccctgacccgaaggcaatctgcca 5515
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 285 tccagacggcgctgttacacttgaaccccgagccgaacgctatctgcca 333 |||| ||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 138185 tccacacggcgctgttgcacttgaacccggagccgaacgcgatctgcca 138233 Score = 48.1 bits (24), Expect = 0.023 Identities = 48/56 (85%) Strand = Plus / Plus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgcc 414 ||||| |||||| ||| || ||||||||||| ||||||||| | ||||||||||| Sbjct: 138259 cccttggcctcggcgtacgcgagctcgtaccagagcgagctgctcgacgtgttgcc 138314
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 285 tccagacggcgctgttacacttgaaccccgagccgaacgctatctgcca 333 |||| ||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 21614666 tccacacggcgctgttgcacttgaacccggagccgaacgcgatctgcca 21614714 Score = 48.1 bits (24), Expect = 0.023 Identities = 48/56 (85%) Strand = Plus / Plus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgcc 414 ||||| |||||| ||| || ||||||||||| ||||||||| | ||||||||||| Sbjct: 21614740 cccttggcctcggcgtacgcgagctcgtaccagagcgagctgctcgacgtgttgcc 21614795 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 gacggcgctgttacacttgaaccc 312 |||||||||||| ||||||||||| Sbjct: 23418016 gacggcgctgttgcacttgaaccc 23417993
>dbj|AK120567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134A09, full insert sequence Length = 1536 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 285 tccagacggcgctgttacacttgaaccccgagccgaacgctatctgcca 333 |||| ||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 1183 tccacacggcgctgttgcacttgaacccggagccgaacgcgatctgcca 1135 Score = 48.1 bits (24), Expect = 0.023 Identities = 48/56 (85%) Strand = Plus / Minus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgcc 414 ||||| |||||| ||| || ||||||||||| ||||||||| | ||||||||||| Sbjct: 1109 cccttggcctcggcgtacgcgagctcgtaccagagcgagctgctcgacgtgttgcc 1054
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 285 tccagacggcgctgttacacttgaaccccgagccgaacgctatctgcca 333 |||| ||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 21924865 tccacacggcgctgttgcacttgaacccggagccgaacgcgatctgcca 21924913 Score = 48.1 bits (24), Expect = 0.023 Identities = 48/56 (85%) Strand = Plus / Plus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgcc 414 ||||| |||||| ||| || ||||||||||| ||||||||| | ||||||||||| Sbjct: 21924939 cccttggcctcggcgtacgcgagctcgtaccagagcgagctgctcgacgtgttgcc 21924994 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 gacggcgctgttacacttgaaccc 312 |||||||||||| ||||||||||| Sbjct: 23727926 gacggcgctgttgcacttgaaccc 23727903
>gb|AF082033.1|AF082033 Hemerocallis hybrid cultivar senescence-associated protein 15 (SA15) mRNA, complete cds Length = 1929 Score = 63.9 bits (32), Expect = 4e-07 Identities = 98/120 (81%) Strand = Plus / Minus Query: 281 gccttccagacggcgctgttacacttgaaccccgagccgaacgctatctgccatatcctg 340 |||||||| || || |||||||||||||||||||| || ||| | |||||||| | | Sbjct: 1461 gccttccacactgcactgttacacttgaaccccgacccaaacccaatctgccaaactcga 1402 Query: 341 tcacgcctcctgatcctcccctttgcctcgctgtaggccagctcgtaccacagcgagctg 400 |||| | | | || |||||||||||||| |||| |||||||| ||||||||||||||| Sbjct: 1401 tcaccctttccgactctcccctttgcctcattgtaagccagctcataccacagcgagctg 1342
>ref|XM_467628.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1458 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| |||||| ||||||||||| ||||||||| | |||||||||||||| Sbjct: 1292 cccttggcctcgacgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaa 1234
>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0037N01 Length = 174085 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| ||| |||||||||||||||| ||||||| | |||||||||||||| Sbjct: 71262 cccttggcctcgacgtacgccagctcgtaccacaccgagctgctcgacgtgttgccgaa 71320 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| |||||||||||||||||||| ||||||| | |||||||| ||||| Sbjct: 24310 cccttggcctcgacgtaggccagctcgtaccacaccgagctgctcgacgtgttcccgaa 24368 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 293 gcgctgttacacttgaaccccgagccgaa 321 |||||||| |||||||||||||| ||||| Sbjct: 71196 gcgctgttgcacttgaaccccgacccgaa 71224
>dbj|AP004630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0031A09 Length = 162511 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| ||| |||||||||||||||| ||||||| | |||||||||||||| Sbjct: 131099 cccttggcctcgacgtacgccagctcgtaccacaccgagctgctcgacgtgttgccgaa 131157 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| |||||||||||||||||||| ||||||| | |||||||| ||||| Sbjct: 84147 cccttggcctcgacgtaggccagctcgtaccacaccgagctgctcgacgtgttcccgaa 84205 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 293 gcgctgttacacttgaaccccgagccgaa 321 |||||||| |||||||||||||| ||||| Sbjct: 131033 gcgctgttgcacttgaaccccgacccgaa 131061
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| |||||| ||||||||||| ||||||||| | |||||||||||||| Sbjct: 32132 cccttggcctcgacgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaa 32074
>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0617A09 Length = 134804 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| |||||| ||||||||||| ||||||||| | |||||||||||||| Sbjct: 126172 cccttggcctcgacgtaggcgagctcgtaccagagcgagctgctcgacgtgttgccgaa 126114
>dbj|AK068185.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135C17, full insert sequence Length = 1669 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| |||||||||||||||||||| ||||||| | |||||||| ||||| Sbjct: 1403 cccttggcctcgacgtaggccagctcgtaccacaccgagctgctcgacgtgttcccgaa 1345
>dbj|AP004939.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17M09, TM0105, complete sequence Length = 127990 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 281 gccttccagacggcgctgttacacttgaaccccgagccgaacgctatctgcca 333 |||||||| |||||||||||||||||||| ||||| || || || |||||||| Sbjct: 85484 gccttccacacggcgctgttacacttgaaacccgacccaaatgcgatctgcca 85536
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 286 ccagacggcgctgttacacttgaaccccgagccgaacgctatctgcca 333 ||||||||||||||| ||||||||||| ||||||||| |||||||| Sbjct: 139376 ccagacggcgctgttgcacttgaacccgctgccgaacgcgatctgcca 139423 Score = 46.1 bits (23), Expect = 0.091 Identities = 50/59 (84%) Strand = Plus / Plus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| ||||| ||||||| ||||||||||| | |||||| | |||||||||||||| Sbjct: 139449 cccttggcctccatgtaggcgagctcgtaccagatggagctgctcgacgtgttgccgaa 139507
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 286 ccagacggcgctgttacacttgaaccccgagccgaa 321 |||||| |||||||| |||||||||||||||||||| Sbjct: 58466 ccagaccgcgctgttgcacttgaaccccgagccgaa 58431 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| ||| |||||||||||||||||||||||| || ||||||||||| Sbjct: 58393 cccttggcctcggcgtacgccagctcgtaccacagcgagctgctgctggtgttgccgaa 58335
>dbj|AK119596.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D11, full insert sequence Length = 2378 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 286 ccagacggcgctgttacacttgaaccccgagccgaacgctatctgcca 333 ||||||||||||||| ||||||||||| ||||||||| |||||||| Sbjct: 1699 ccagacggcgctgttgcacttgaacccgctgccgaacgcgatctgcca 1652 Score = 46.1 bits (23), Expect = 0.091 Identities = 50/59 (84%) Strand = Plus / Minus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| ||||| ||||||| ||||||||||| | |||||| | |||||||||||||| Sbjct: 1626 cccttggcctccatgtaggcgagctcgtaccagatggagctgctcgacgtgttgccgaa 1568
>dbj|AK119222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E03, full insert sequence Length = 2098 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 286 ccagacggcgctgttacacttgaaccccgagccgaa 321 |||||| |||||||| |||||||||||||||||||| Sbjct: 1616 ccagaccgcgctgttgcacttgaaccccgagccgaa 1581 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| ||| |||||||||||||||||||||||| || ||||||||||| Sbjct: 1543 cccttggcctcggcgtacgccagctcgtaccacagcgagctgctgctggtgttgccgaa 1485
>dbj|AK112059.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A11, full insert sequence Length = 2025 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 286 ccagacggcgctgttacacttgaaccccgagccgaa 321 |||||| |||||||| |||||||||||||||||||| Sbjct: 1616 ccagaccgcgctgttgcacttgaaccccgagccgaa 1581 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| |||||| ||| |||||||||||||||||||||||| || ||||||||||| Sbjct: 1543 cccttggcctcggcgtacgccagctcgtaccacagcgagctgctgctggtgttgccgaa 1485
>dbj|AK101103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025C07, full insert sequence Length = 2356 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 286 ccagacggcgctgttacacttgaaccccgagccgaacgctatctgcca 333 ||||||||||||||| ||||||||||| ||||||||| |||||||| Sbjct: 1700 ccagacggcgctgttgcacttgaacccgctgccgaacgcgatctgcca 1653 Score = 46.1 bits (23), Expect = 0.091 Identities = 50/59 (84%) Strand = Plus / Minus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| ||||| ||||||| ||||||||||| | |||||| | |||||||||||||| Sbjct: 1627 cccttggcctccatgtaggcgagctcgtaccagatggagctgctcgacgtgttgccgaa 1569
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence Length = 183990 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgtt 411 ||||| ||||| ||||||| ||||| ||||||||||||||| |||| ||||| Sbjct: 5336 cccttggcctccgtgtaggcgagctcataccacagcgagctgctggaggtgtt 5284
>gb|AC144389.22| Medicago truncatula clone mth2-25e14, complete sequence Length = 127170 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 281 gccttccagacggcgctgttacacttgaaccccgagccgaacgctatctgcca 333 |||||||| ||||||||||||||||| || ||||| || || || |||||||| Sbjct: 126398 gccttccacacggcgctgttacacttaaaacccgacccaaatgcaatctgcca 126450
>gb|AF527808.1| Sorghum bicolor clone BAC SBTXS_0040L6 php200725 orthologous region Length = 90923 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgtt 411 ||||| ||||| ||||||| ||||| ||||||||||||||| |||| ||||| Sbjct: 10311 cccttggcctccgtgtaggcgagctcataccacagcgagctgctggaggtgtt 10363
>gb|AC150443.2| Medicago truncatula chromosome 7 BAC clone mth2-71o19, complete sequence Length = 132097 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 281 gccttccagacggcgctgttacacttgaaccccgagccgaacgctatctgcca 333 |||||||| ||||||||||||||||| || ||||| || || || |||||||| Sbjct: 20545 gccttccacacggcgctgttacacttaaaacccgacccaaatgcaatctgcca 20597
>ref|NM_194947.1| Oryza sativa (japonica cultivar-group) putative senescence-associated protein 15 (OSJNBa0036D19.6), mRNA Length = 1797 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Minus Query: 286 ccagacggcgctgttacacttgaaccccgagccgaa 321 ||||||||||||||| |||||||| || |||||||| Sbjct: 1476 ccagacggcgctgttgcacttgaagccggagccgaa 1441 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 373 gtaggccagctcgtaccacagcgagctg 400 |||||| ||||||||||| ||||||||| Sbjct: 1389 gtaggcgagctcgtaccagagcgagctg 1362
>ref|NM_196127.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OJ1341F06.20), mRNA Length = 609 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 286 ccagacggcgctgttacacttgaaccccgagccgaa 321 ||||||||||||||| |||||||| || |||||||| Sbjct: 57 ccagacggcgctgttgcacttgaagcctgagccgaa 92
>ref|XM_470547.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1788 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 acggcgctgttacacttgaaccccgagccgaa 321 ||||||||||| ||||||||||| |||||||| Sbjct: 1700 acggcgctgttgcacttgaacccggagccgaa 1669
>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02, complete sequence Length = 131922 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 286 ccagacggcgctgttacacttgaaccccgagccgaa 321 ||||||||||||||| |||||||| || |||||||| Sbjct: 74860 ccagacggcgctgttgcacttgaagcctgagccgaa 74895
>gb|AC116926.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1341F06, from chromosome 10, complete sequence Length = 102520 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Minus Query: 286 ccagacggcgctgttacacttgaaccccgagccgaa 321 ||||||||||||||| |||||||| || |||||||| Sbjct: 99583 ccagacggcgctgttgcacttgaagcctgagccgaa 99548
>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence Length = 144359 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 286 ccagacggcgctgttacacttgaaccccgagccgaa 321 ||||||||||||||| |||||||| || |||||||| Sbjct: 71845 ccagacggcgctgttgcacttgaagccggagccgaa 71880 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 373 gtaggccagctcgtaccacagcgagctg 400 |||||| ||||||||||| ||||||||| Sbjct: 71932 gtaggcgagctcgtaccagagcgagctg 71959
>dbj|AK119228.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-A08, full insert sequence Length = 1912 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 acggcgctgttacacttgaaccccgagccgaa 321 ||||||||||| ||||||||||| |||||||| Sbjct: 1595 acggcgctgttgcacttgaacccggagccgaa 1564
>dbj|AK100798.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121F20, full insert sequence Length = 662 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 acggcgctgttacacttgaaccccgagccgaa 321 ||||||||||| ||||||||||| |||||||| Sbjct: 345 acggcgctgttgcacttgaacccggagccgaa 314
>dbj|AK099232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094M20, full insert sequence Length = 1903 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 acggcgctgttacacttgaaccccgagccgaa 321 ||||||||||| ||||||||||| |||||||| Sbjct: 1586 acggcgctgttgcacttgaacccggagccgaa 1555
>dbj|AK061335.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-B10, full insert sequence Length = 1909 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 acggcgctgttacacttgaaccccgagccgaa 321 ||||||||||| ||||||||||| |||||||| Sbjct: 1595 acggcgctgttgcacttgaacccggagccgaa 1564
>dbj|AK060840.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D04, full insert sequence Length = 1907 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 acggcgctgttacacttgaaccccgagccgaa 321 ||||||||||| ||||||||||| |||||||| Sbjct: 1590 acggcgctgttgcacttgaacccggagccgaa 1559
>gb|DQ122189.1| Gossypium hirsutum 3-ketoacyl-CoA synthase mRNA, complete cds Length = 1865 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Minus Query: 353 atcctcccctttgcctcgctgtaggccagctcgtaccacagcga 396 ||||||||||||||||| ||||| || ||||||||||||||| Sbjct: 1414 atcctcccctttgcctcaatgtagctcatctcgtaccacagcga 1371
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 acggcgctgttacacttgaaccccgagccgaa 321 ||||||||||| ||||||||||| |||||||| Sbjct: 81751 acggcgctgttgcacttgaacccggagccgaa 81720
>ref|NM_128221.4| Arabidopsis thaliana acyltransferase AT2G26640 mRNA, complete cds Length = 2415 Score = 46.1 bits (23), Expect = 0.091 Identities = 35/39 (89%) Strand = Plus / Minus Query: 295 gctgttacacttgaaccccgagccgaacgctatctgcca 333 |||||| |||||||||||||| || || ||||||||||| Sbjct: 1480 gctgttgcacttgaaccccgaaccaaaagctatctgcca 1442
>ref|NM_128222.3| Arabidopsis thaliana AKT1 (ARABIDOPSIS K TRANSPORTER 1); cyclic nucleotide binding / inward rectifier potassium channel AT2G26650 (AKT1) mRNA, complete cds Length = 3389 Score = 46.1 bits (23), Expect = 0.091 Identities = 35/39 (89%) Strand = Plus / Plus Query: 295 gctgttacacttgaaccccgagccgaacgctatctgcca 333 |||||| |||||||||||||| || || ||||||||||| Sbjct: 3161 gctgttgcacttgaaccccgaaccaaaagctatctgcca 3199
>gb|AC003105.3| Arabidopsis thaliana chromosome 2 clone F18A8 map B68, complete sequence Length = 95167 Score = 46.1 bits (23), Expect = 0.091 Identities = 35/39 (89%) Strand = Plus / Minus Query: 295 gctgttacacttgaaccccgagccgaacgctatctgcca 333 |||||| |||||||||||||| || || ||||||||||| Sbjct: 1507 gctgttgcacttgaaccccgaaccaaaagctatctgcca 1469
>gb|BT005692.1| Arabidopsis thaliana clone U50015 putative beta-ketoacyl-CoA synthase (At2g26640) mRNA, complete cds Length = 1561 Score = 46.1 bits (23), Expect = 0.091 Identities = 35/39 (89%) Strand = Plus / Minus Query: 295 gctgttacacttgaaccccgagccgaacgctatctgcca 333 |||||| |||||||||||||| || || ||||||||||| Sbjct: 1422 gctgttgcacttgaaccccgaaccaaaagctatctgcca 1384
>gb|BT003854.1| Arabidopsis thaliana clone RAFL16-02-C13 (R50015) putative beta-ketoacyl-CoA synthase (At2g26640) mRNA, complete cds Length = 1840 Score = 46.1 bits (23), Expect = 0.091 Identities = 35/39 (89%) Strand = Plus / Minus Query: 295 gctgttacacttgaaccccgagccgaacgctatctgcca 333 |||||| |||||||||||||| || || ||||||||||| Sbjct: 1482 gctgttgcacttgaaccccgaaccaaaagctatctgcca 1444
>gb|AY105739.1| Zea mays PCO084555 mRNA sequence Length = 962 Score = 46.1 bits (23), Expect = 0.091 Identities = 50/59 (84%) Strand = Plus / Minus Query: 359 ccctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 ||||| ||||| ||||||| ||||||||||| | |||||| |||| ||||||||||| Sbjct: 335 cccttggcctccatgtaggcgagctcgtaccagatggagctgctggaggtgttgccgaa 277 Score = 42.1 bits (21), Expect = 1.4 Identities = 48/57 (84%) Strand = Plus / Minus Query: 277 cagtgccttccagacggcgctgttacacttgaaccccgagccgaacgctatctgcca 333 |||||| | ||| ||||||||||| ||||||||||| |||||| || |||||||| Sbjct: 417 cagtgcgtgccacacggcgctgttgcacttgaacccgctgccgaaggcgatctgcca 361
>gb|AF458093.1| Persea americana fatty acid elongase mRNA, partial cds Length = 982 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Minus Query: 293 gcgctgttacacttgaaccccgagccgaacgctatctgccatatcc 338 ||||||||||||||||| || || ||||| || |||||||| |||| Sbjct: 674 gcgctgttacacttgaagccggatccgaaagcaatctgccacatcc 629
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.36 Identities = 37/42 (88%) Strand = Plus / Minus Query: 355 cctcccctttgcctcgctgtaggccagctcgtaccacagcga 396 ||||||||| ||||| |||| ||||||| |||||||||||| Sbjct: 20058245 cctccccttcgcctccatgtacgccagctggtaccacagcga 20058204 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 tcctcccctttgcctcgctg 373 |||||||||||||||||||| Sbjct: 961280 tcctcccctttgcctcgctg 961299
>dbj|AP006175.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0669G04 Length = 74610 Score = 44.1 bits (22), Expect = 0.36 Identities = 37/42 (88%) Strand = Plus / Minus Query: 355 cctcccctttgcctcgctgtaggccagctcgtaccacagcga 396 ||||||||| ||||| |||| ||||||| |||||||||||| Sbjct: 65376 cctccccttcgcctccatgtacgccagctggtaccacagcga 65335
>dbj|AK108633.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-G01, full insert sequence Length = 1492 Score = 44.1 bits (22), Expect = 0.36 Identities = 37/42 (88%) Strand = Plus / Minus Query: 355 cctcccctttgcctcgctgtaggccagctcgtaccacagcga 396 ||||||||| ||||| |||| ||||||| |||||||||||| Sbjct: 1148 cctccccttcgcctccatgtacgccagctggtaccacagcga 1107
>gb|AY107833.1| Zea mays PCO063938 mRNA sequence Length = 1113 Score = 44.1 bits (22), Expect = 0.36 Identities = 49/58 (84%) Strand = Plus / Minus Query: 360 cctttgcctcgctgtaggccagctcgtaccacagcgagctgttggacgtgttgccgaa 417 |||| |||||| ||||||||||||||||| || | |||| |||||||||| ||||| Sbjct: 630 ccttggcctcgatgtaggccagctcgtacagcaccaggctgctggacgtgttcccgaa 573
>ref|XM_470781.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1401 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 295 gctgttacacttgaaccccgagccgaacg 323 |||||| |||||||||||||| ||||||| Sbjct: 1248 gctgttgcacttgaaccccgacccgaacg 1220
>ref|XM_470771.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1464 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 295 gctgttacacttgaaccccgagccgaacg 323 |||||| |||||||||||||| ||||||| Sbjct: 1317 gctgttgcacttgaaccccgacccgaacg 1289
>gb|AC084022.10| Oryza sativa chromosome 3 BAC OSJNBa0011H24 genomic sequence, complete sequence Length = 137184 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 295 gctgttacacttgaaccccgagccgaacg 323 |||||| |||||||||||||| ||||||| Sbjct: 53315 gctgttgcacttgaaccccgacccgaacg 53343 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 295 gctgttacacttgaaccccgagccgaacg 323 |||||| |||||||||||||| ||||||| Sbjct: 10078 gctgttgcacttgaaccccgacccgaacg 10050
>gb|AC006003.4| Homo sapiens PAC clone RP4-782K24 from 7, complete sequence Length = 123255 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 ctgacctcagtgccttccaga 290 ||||||||||||||||||||| Sbjct: 8094 ctgacctcagtgccttccaga 8114
>ref|XM_793726.1| PREDICTED: Strongylocentrotus purpuratus similar to DEAH (Asp-Glu-Ala-His) box polypeptide 36 (LOC594278), mRNA Length = 1491 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 ccgacagatcacccaaacatattga 109 ||||||||||||||||||| ||||| Sbjct: 695 ccgacagatcacccaaacacattga 719
>ref|XM_787153.1| PREDICTED: Strongylocentrotus purpuratus similar to DEAH (Asp-Glu-Ala-His) box polypeptide 36 (LOC587426), mRNA Length = 1734 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 ccgacagatcacccaaacatattga 109 ||||||||||||||||||| ||||| Sbjct: 968 ccgacagatcacccaaacacattga 992
>emb|AL606631.2|OSJN00069 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050O03, complete sequence Length = 140948 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 348 tcctgatcctcccctttgcctcgctgtaggccagctcgtac 388 |||| ||||||||||| |||||| |||| || ||||||||| Sbjct: 65474 tcctcatcctccccttggcctcgatgtacgcaagctcgtac 65434
>gb|AC090338.6| Homo sapiens chromosome 18, clone RP11-704C2, complete sequence Length = 200525 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 ttcgggtgacagtgctgaaaa 170 ||||||||||||||||||||| Sbjct: 68223 ttcgggtgacagtgctgaaaa 68203
>gb|AC091733.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048F08, from chromosome 3, complete sequence Length = 155790 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 295 gctgttacacttgaaccccgagccgaacg 323 |||||| |||||||||||||| ||||||| Sbjct: 122089 gctgttgcacttgaaccccgacccgaacg 122061 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 295 gctgttacacttgaaccccgagccgaacg 323 |||||| |||||||||||||| ||||||| Sbjct: 106431 gctgttgcacttgaaccccgacccgaacg 106459
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 348 tcctgatcctcccctttgcctcgctgtaggccagctcgtac 388 |||| ||||||||||| |||||| |||| || ||||||||| Sbjct: 985755 tcctcatcctccccttggcctcgatgtacgcaagctcgtac 985715
>dbj|AK119922.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-G08, full insert sequence Length = 1580 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 348 tcctgatcctcccctttgcctcgctgtaggccagctcgtac 388 |||| ||||||||||| |||||| |||| || ||||||||| Sbjct: 1354 tcctcatcctccccttggcctcgatgtacgcaagctcgtac 1314
>dbj|AK071506.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093M02, full insert sequence Length = 1666 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 295 gctgttacacttgaaccccgagccgaacg 323 |||||| |||||||||||||| ||||||| Sbjct: 1286 gctgttgcacttgaaccccgacccgaacg 1258
>gb|AC157520.2| Mus musculus BAC clone RP23-229N21 from 6, complete sequence Length = 196037 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 atcacccaaacatattgaatacagt 116 |||||||||||| |||||||||||| Sbjct: 107160 atcacccaaacaaattgaatacagt 107184
>emb|AL928726.5| Mouse DNA sequence from clone RP23-397A11 on chromosome 2, complete sequence Length = 120515 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 341 tcacgcctcctgatcctcccctttgcctc 369 |||| |||||||| ||||||||||||||| Sbjct: 19875 tcactcctcctgaacctcccctttgcctc 19847
>ref|NM_111863.1| Arabidopsis thaliana acyltransferase AT3G10280 mRNA, complete cds Length = 1380 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 gccagctcgtaccacagcga 396 |||||||||||||||||||| Sbjct: 1199 gccagctcgtaccacagcga 1180
>ref|NM_130237.2| Arabidopsis thaliana HIC (HIGH CARBON DIOXIDE); acyltransferase AT2G46720 (HIC) mRNA, complete cds Length = 2839 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 gccagctcgtaccacagcga 396 |||||||||||||||||||| Sbjct: 2658 gccagctcgtaccacagcga 2639
>ref|XM_471043.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1356 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 353 atcctcccctttgcctcgctgtaggccagctcgtac 388 ||||||||||| |||||| |||| || ||||||||| Sbjct: 1354 atcctccccttggcctcgatgtacgcaagctcgtac 1319
>gb|AY309267.1| Schistosoma mansoni cathepsin D-like aspartate protease gene, complete sequence Length = 18576 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 atattgaatacagtcgaatt 122 |||||||||||||||||||| Sbjct: 15761 atattgaatacagtcgaatt 15780
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gcgcgcttcctgtttcgggt 156 |||||||||||||||||||| Sbjct: 3692347 gcgcgcttcctgtttcgggt 3692366
>gb|AC146766.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1112E06, complete sequence Length = 177488 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 gacggcgctgttacacttgaaccc 312 |||||||||||| ||||||||||| Sbjct: 8676 gacggcgctgttgcacttgaaccc 8653
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gcgcgcttcctgtttcgggt 156 |||||||||||||||||||| Sbjct: 3501443 gcgcgcttcctgtttcgggt 3501462
>gb|AC104845.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0091E08, complete sequence Length = 119526 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 gacggcgctgttacacttgaaccc 312 |||||||||||| ||||||||||| Sbjct: 33529 gacggcgctgttgcacttgaaccc 33506
>gb|AC122882.4| Mus musculus BAC clone RP23-80M17 from chromosome 7, complete sequence Length = 260989 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccaggggttgttctgctcct 257 |||||||||||||||||||| Sbjct: 114342 ccaggggttgttctgctcct 114323
>gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC F14P13 genomic sequence, complete sequence Length = 87937 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 gccagctcgtaccacagcga 396 |||||||||||||||||||| Sbjct: 49359 gccagctcgtaccacagcga 49378
>emb|AL732484.13| Mouse DNA sequence from clone RP23-37B7 on chromosome 2, complete sequence Length = 201265 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 aatggaatcatctaaaatta 80 |||||||||||||||||||| Sbjct: 101375 aatggaatcatctaaaatta 101394
>emb|BX571870.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 12/17 Length = 348505 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tgctgaaaaggcaaaattat 181 |||||||||||||||||||| Sbjct: 98310 tgctgaaaaggcaaaattat 98291
>gb|AC005819.3| Arabidopsis thaliana chromosome 2 clone T3A4 map CIC06C03, complete sequence Length = 55870 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 gccagctcgtaccacagcga 396 |||||||||||||||||||| Sbjct: 54603 gccagctcgtaccacagcga 54584
>dbj|AK134695.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330526D06 product:hypothetical protein, full insert sequence Length = 3168 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 aatggaatcatctaaaatta 80 |||||||||||||||||||| Sbjct: 2315 aatggaatcatctaaaatta 2334
>dbj|AK158852.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K430345M05 product:unclassifiable, full insert sequence Length = 3294 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 aatggaatcatctaaaatta 80 |||||||||||||||||||| Sbjct: 2443 aatggaatcatctaaaatta 2462
>dbj|AK039132.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230101G02 product:unclassifiable, full insert sequence Length = 3446 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 aatggaatcatctaaaatta 80 |||||||||||||||||||| Sbjct: 2305 aatggaatcatctaaaatta 2324
>gb|AF188486.1|AF188486 Arabidopsis thaliana putative 3-keto-acyl-CoA synthase (HIC) gene, partial sequence Length = 1584 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 gccagctcgtaccacagcga 396 |||||||||||||||||||| Sbjct: 1224 gccagctcgtaccacagcga 1205
>gb|AF188485.1|AF188485 Arabidopsis thaliana putative 3-keto-acyl-CoA synthase (HIC) gene, complete cds Length = 5600 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 gccagctcgtaccacagcga 396 |||||||||||||||||||| Sbjct: 2792 gccagctcgtaccacagcga 2773
>dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0646B04 Length = 178896 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 tcctcccctttgcctcgctg 373 |||||||||||||||||||| Sbjct: 125407 tcctcccctttgcctcgctg 125426
>emb|BX510657.9| Zebrafish DNA sequence from clone CH211-142K18 in linkage group 20, complete sequence Length = 163967 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 aggcaaaattattcagcaac 189 |||||||||||||||||||| Sbjct: 97366 aggcaaaattattcagcaac 97347 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,141,667 Number of Sequences: 3902068 Number of extensions: 3141667 Number of successful extensions: 60771 Number of sequences better than 10.0: 113 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 60073 Number of HSP's gapped (non-prelim): 680 length of query: 420 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 398 effective length of database: 17,147,199,772 effective search space: 6824585509256 effective search space used: 6824585509256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
