| Clone Name | rbaet23e07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB076983.1| Avena sativa AsHHT4 mRNA for hydroxyanthranilate hydroxycinnamoyltransferase 4, partial cds Length = 1100 Score = 355 bits (179), Expect = 8e-95 Identities = 224/239 (93%) Strand = Plus / Minus Query: 195 gatcagcttccggaacttctccatgtgctccgcctgcaacgagatggcgatggacaggct 254 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 898 gatcagcttccggaacttctccatgtgctcggcctgcaacgagatggcgatggacaggct 839 Query: 255 gccgtccttgctcgcgctcgggaggacgaacgccagcccctcgtacgcgatgccgccagg 314 |||||||||| ||||||||||||||||||||||||||||||| || || ||||| ||||| Sbjct: 838 gccgtccttgttcgcgctcgggaggacgaacgccagcccctcataggcaatgccaccagg 779 Query: 315 acccatgaacaccggcctcccccagccaaaatcggcgtcgtggatcggcaggcgcaccca 374 |||||||||||| |||| |||||| || |||||||||| ||||||||||||||||||||| Sbjct: 778 acccatgaacacgggccgcccccaaccgaaatcggcgttgtggatcggcaggcgcaccca 719 Query: 375 gctggtgaggccgaggttggggcaccggaaagtgtgtgctccacggaccaatgctgaca 433 |||||||||||||||||| ||||||||||| ||||| ||||| |||||||||||||||| Sbjct: 718 gctggtgaggccgaggttagggcaccggaaggtgtgggctccgcggaccaatgctgaca 660
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 270 bits (136), Expect = 4e-69 Identities = 220/248 (88%) Strand = Plus / Minus Query: 184 tacacatcgaggatcagcttccggaacttctccatgtgctccgcctgcaacgagatggcg 243 ||||| |||| ||||||||||| |||||||||||||||||| |||||||| |||||||| Sbjct: 102370 tacacctcgaagatcagcttcctgaacttctccatgtgctcagcctgcaatgagatggct 102311 Query: 244 atggacaggctgccgtccttgctcgcgctcgggaggacgaacgccagcccctcgtacgcg 303 ||||| ||||| || |||||| ||||||| |||||||| ||||||||||| || || ||| Sbjct: 102310 atggataggctaccatccttgttcgcgcttgggaggacaaacgccagcccttcataggcg 102251 Query: 304 atgccgccaggacccatgaacaccggcctcccccagccaaaatcggcgtcgtggatcggc 363 ||||| ||||||||||||||||| || || ||||| ||||||||||| || || || ||| Sbjct: 102250 atgccaccaggacccatgaacactggtcttccccatccaaaatcggcatcatgaattggc 102191 Query: 364 aggcgcacccagctggtgaggccgaggttggggcaccggaaagtgtgtgctccacggacc 423 | |||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| Sbjct: 102190 aagcgcacccagctggtgagcccgaggttcggacaccggaaagtgtgtgctccacggacc 102131 Query: 424 aatgctga 431 |||||||| Sbjct: 102130 aatgctga 102123
>ref|XM_473058.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1329 Score = 262 bits (132), Expect = 9e-67 Identities = 219/248 (88%) Strand = Plus / Minus Query: 184 tacacatcgaggatcagcttccggaacttctccatgtgctccgcctgcaacgagatggcg 243 ||||| |||| ||||||||||| |||||||||||||||||| |||||||| |||||||| Sbjct: 1328 tacacctcgaagatcagcttcctgaacttctccatgtgctcagcctgcaatgagatggct 1269 Query: 244 atggacaggctgccgtccttgctcgcgctcgggaggacgaacgccagcccctcgtacgcg 303 ||||| ||||| || |||||| ||||||| |||||||| ||||||||||| || || ||| Sbjct: 1268 atggataggctaccatccttgttcgcgcttgggaggacaaacgccagcccttcataggcg 1209 Query: 304 atgccgccaggacccatgaacaccggcctcccccagccaaaatcggcgtcgtggatcggc 363 ||||| ||||||||||||||||| || || ||||| |||||||| || || || || ||| Sbjct: 1208 atgccaccaggacccatgaacactggtcttccccatccaaaatctgcatcatgaattggc 1149 Query: 364 aggcgcacccagctggtgaggccgaggttggggcaccggaaagtgtgtgctccacggacc 423 | |||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| Sbjct: 1148 aagcgcacccagctggtgagcccgaggttcggacaccggaaagtgtgtgctccacggacc 1089 Query: 424 aatgctga 431 |||||||| Sbjct: 1088 aatgctga 1081
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02, complete sequence Length = 173171 Score = 262 bits (132), Expect = 9e-67 Identities = 219/248 (88%) Strand = Plus / Minus Query: 184 tacacatcgaggatcagcttccggaacttctccatgtgctccgcctgcaacgagatggcg 243 ||||| |||| ||||||||||| |||||||||||||||||| |||||||| |||||||| Sbjct: 94920 tacacctcgaagatcagcttcctgaacttctccatgtgctcagcctgcaatgagatggct 94861 Query: 244 atggacaggctgccgtccttgctcgcgctcgggaggacgaacgccagcccctcgtacgcg 303 ||||| ||||| || |||||| ||||||| |||||||| ||||||||||| || || ||| Sbjct: 94860 atggataggctaccatccttgttcgcgcttgggaggacaaacgccagcccttcataggcg 94801 Query: 304 atgccgccaggacccatgaacaccggcctcccccagccaaaatcggcgtcgtggatcggc 363 ||||| ||||||||||||||||| || || ||||| |||||||| || || || || ||| Sbjct: 94800 atgccaccaggacccatgaacactggtcttccccatccaaaatctgcatcatgaattggc 94741 Query: 364 aggcgcacccagctggtgaggccgaggttggggcaccggaaagtgtgtgctccacggacc 423 | |||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| Sbjct: 94740 aagcgcacccagctggtgagcccgaggttcggacaccggaaagtgtgtgctccacggacc 94681 Query: 424 aatgctga 431 |||||||| Sbjct: 94680 aatgctga 94673
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 262 bits (132), Expect = 9e-67 Identities = 219/248 (88%) Strand = Plus / Minus Query: 184 tacacatcgaggatcagcttccggaacttctccatgtgctccgcctgcaacgagatggcg 243 ||||| |||| ||||||||||| |||||||||||||||||| |||||||| |||||||| Sbjct: 24974335 tacacctcgaagatcagcttcctgaacttctccatgtgctcagcctgcaatgagatggct 24974276 Query: 244 atggacaggctgccgtccttgctcgcgctcgggaggacgaacgccagcccctcgtacgcg 303 ||||| ||||| || |||||| ||||||| |||||||| ||||||||||| || || ||| Sbjct: 24974275 atggataggctaccatccttgttcgcgcttgggaggacaaacgccagcccttcataggcg 24974216 Query: 304 atgccgccaggacccatgaacaccggcctcccccagccaaaatcggcgtcgtggatcggc 363 ||||| ||||||||||||||||| || || ||||| |||||||| || || || || ||| Sbjct: 24974215 atgccaccaggacccatgaacactggtcttccccatccaaaatctgcatcatgaattggc 24974156 Query: 364 aggcgcacccagctggtgaggccgaggttggggcaccggaaagtgtgtgctccacggacc 423 | |||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| Sbjct: 24974155 aagcgcacccagctggtgagcccgaggttcggacaccggaaagtgtgtgctccacggacc 24974096 Query: 424 aatgctga 431 |||||||| Sbjct: 24974095 aatgctga 24974088
>dbj|AK119237.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D12, full insert sequence Length = 1827 Score = 262 bits (132), Expect = 9e-67 Identities = 219/248 (88%) Strand = Plus / Minus Query: 184 tacacatcgaggatcagcttccggaacttctccatgtgctccgcctgcaacgagatggcg 243 ||||| |||| ||||||||||| |||||||||||||||||| |||||||| |||||||| Sbjct: 1542 tacacctcgaagatcagcttcctgaacttctccatgtgctcagcctgcaatgagatggct 1483 Query: 244 atggacaggctgccgtccttgctcgcgctcgggaggacgaacgccagcccctcgtacgcg 303 ||||| ||||| || |||||| ||||||| |||||||| ||||||||||| || || ||| Sbjct: 1482 atggataggctaccatccttgttcgcgcttgggaggacaaacgccagcccttcataggcg 1423 Query: 304 atgccgccaggacccatgaacaccggcctcccccagccaaaatcggcgtcgtggatcggc 363 ||||| ||||||||||||||||| || || ||||| |||||||| || || || || ||| Sbjct: 1422 atgccaccaggacccatgaacactggtcttccccatccaaaatctgcatcatgaattggc 1363 Query: 364 aggcgcacccagctggtgaggccgaggttggggcaccggaaagtgtgtgctccacggacc 423 | |||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| Sbjct: 1362 aagcgcacccagctggtgagcccgaggttcggacaccggaaagtgtgtgctccacggacc 1303 Query: 424 aatgctga 431 |||||||| Sbjct: 1302 aatgctga 1295
>dbj|AK104637.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D12, full insert sequence Length = 1851 Score = 262 bits (132), Expect = 9e-67 Identities = 219/248 (88%) Strand = Plus / Minus Query: 184 tacacatcgaggatcagcttccggaacttctccatgtgctccgcctgcaacgagatggcg 243 ||||| |||| ||||||||||| |||||||||||||||||| |||||||| |||||||| Sbjct: 1448 tacacctcgaagatcagcttcctgaacttctccatgtgctcagcctgcaatgagatggct 1389 Query: 244 atggacaggctgccgtccttgctcgcgctcgggaggacgaacgccagcccctcgtacgcg 303 ||||| ||||| || |||||| ||||||| |||||||| ||||||||||| || || ||| Sbjct: 1388 atggataggctaccatccttgttcgcgcttgggaggacaaacgccagcccttcataggcg 1329 Query: 304 atgccgccaggacccatgaacaccggcctcccccagccaaaatcggcgtcgtggatcggc 363 ||||| ||||||||||||||||| || || ||||| |||||||| || || || || ||| Sbjct: 1328 atgccaccaggacccatgaacactggtcttccccatccaaaatctgcatcatgaattggc 1269 Query: 364 aggcgcacccagctggtgaggccgaggttggggcaccggaaagtgtgtgctccacggacc 423 | |||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| Sbjct: 1268 aagcgcacccagctggtgagcccgaggttcggacaccggaaagtgtgtgctccacggacc 1209 Query: 424 aatgctga 431 |||||||| Sbjct: 1208 aatgctga 1201
>dbj|AK072528.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131B01, full insert sequence Length = 1881 Score = 262 bits (132), Expect = 9e-67 Identities = 219/248 (88%) Strand = Plus / Minus Query: 184 tacacatcgaggatcagcttccggaacttctccatgtgctccgcctgcaacgagatggcg 243 ||||| |||| ||||||||||| |||||||||||||||||| |||||||| |||||||| Sbjct: 1449 tacacctcgaagatcagcttcctgaacttctccatgtgctcagcctgcaatgagatggct 1390 Query: 244 atggacaggctgccgtccttgctcgcgctcgggaggacgaacgccagcccctcgtacgcg 303 ||||| ||||| || |||||| ||||||| |||||||| ||||||||||| || || ||| Sbjct: 1389 atggataggctaccatccttgttcgcgcttgggaggacaaacgccagcccttcataggcg 1330 Query: 304 atgccgccaggacccatgaacaccggcctcccccagccaaaatcggcgtcgtggatcggc 363 ||||| ||||||||||||||||| || || ||||| |||||||| || || || || ||| Sbjct: 1329 atgccaccaggacccatgaacactggtcttccccatccaaaatctgcatcatgaattggc 1270 Query: 364 aggcgcacccagctggtgaggccgaggttggggcaccggaaagtgtgtgctccacggacc 423 | |||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| Sbjct: 1269 aagcgcacccagctggtgagcccgaggttcggacaccggaaagtgtgtgctccacggacc 1210 Query: 424 aatgctga 431 |||||||| Sbjct: 1209 aatgctga 1202
>ref|XM_466682.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1671 Score = 254 bits (128), Expect = 2e-64 Identities = 218/248 (87%) Strand = Plus / Minus Query: 190 tcgaggatcagcttccggaacttctccatgtgctccgcctgcaacgagatggcgatggac 249 |||| ||||| ||| |||||||||||||||||||| ||||||| ||||||||| | ||| Sbjct: 1429 tcgaagatcatcttgcggaacttctccatgtgctcggcctgcagcgagatggccaccgac 1370 Query: 250 aggctgccgtccttgctcgcgctcgggaggacgaacgccagcccctcgtacgcgatgccg 309 ||||||||||| ||| ||||| ||||| ||||| || ||||||||||||||||||||| Sbjct: 1369 aggctgccgtcgccgctggcgctggggagcacgaaggcgagcccctcgtacgcgatgccg 1310 Query: 310 ccaggacccatgaacaccggcctcccccagccaaaatcggcgtcgtggatcggcaggcgc 369 || || |||||||||||||||| ||||||||| || |||||||||||||||||||| || Sbjct: 1309 ccggggcccatgaacaccggccgcccccagccgaagtcggcgtcgtggatcggcagtcgg 1250 Query: 370 acccagctggtgaggccgaggttggggcaccggaaagtgtgtgctccacggaccaatgct 429 ||||||||||||||||||||||||||||||||||| ||||| || || ||||||| || Sbjct: 1249 acccagctggtgaggccgaggttggggcaccggaacgtgtgcgcgccgcggaccagcgcc 1190 Query: 430 gacaggtc 437 |||||||| Sbjct: 1189 gacaggtc 1182
>ref|XM_506864.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1004_A05.15 mRNA Length = 1716 Score = 254 bits (128), Expect = 2e-64 Identities = 218/248 (87%) Strand = Plus / Minus Query: 190 tcgaggatcagcttccggaacttctccatgtgctccgcctgcaacgagatggcgatggac 249 |||| ||||| ||| |||||||||||||||||||| ||||||| ||||||||| | ||| Sbjct: 1429 tcgaagatcatcttgcggaacttctccatgtgctcggcctgcagcgagatggccaccgac 1370 Query: 250 aggctgccgtccttgctcgcgctcgggaggacgaacgccagcccctcgtacgcgatgccg 309 ||||||||||| ||| ||||| ||||| ||||| || ||||||||||||||||||||| Sbjct: 1369 aggctgccgtcgccgctggcgctggggagcacgaaggcgagcccctcgtacgcgatgccg 1310 Query: 310 ccaggacccatgaacaccggcctcccccagccaaaatcggcgtcgtggatcggcaggcgc 369 || || |||||||||||||||| ||||||||| || |||||||||||||||||||| || Sbjct: 1309 ccggggcccatgaacaccggccgcccccagccgaagtcggcgtcgtggatcggcagtcgg 1250 Query: 370 acccagctggtgaggccgaggttggggcaccggaaagtgtgtgctccacggaccaatgct 429 ||||||||||||||||||||||||||||||||||| ||||| || || ||||||| || Sbjct: 1249 acccagctggtgaggccgaggttggggcaccggaacgtgtgcgcgccgcggaccagcgcc 1190 Query: 430 gacaggtc 437 |||||||| Sbjct: 1189 gacaggtc 1182
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 254 bits (128), Expect = 2e-64 Identities = 218/248 (87%) Strand = Plus / Minus Query: 190 tcgaggatcagcttccggaacttctccatgtgctccgcctgcaacgagatggcgatggac 249 |||| ||||| ||| |||||||||||||||||||| ||||||| ||||||||| | ||| Sbjct: 24103721 tcgaagatcatcttgcggaacttctccatgtgctcggcctgcagcgagatggccaccgac 24103662 Query: 250 aggctgccgtccttgctcgcgctcgggaggacgaacgccagcccctcgtacgcgatgccg 309 ||||||||||| ||| ||||| ||||| ||||| || ||||||||||||||||||||| Sbjct: 24103661 aggctgccgtcgccgctggcgctggggagcacgaaggcgagcccctcgtacgcgatgccg 24103602 Query: 310 ccaggacccatgaacaccggcctcccccagccaaaatcggcgtcgtggatcggcaggcgc 369 || || |||||||||||||||| ||||||||| || |||||||||||||||||||| || Sbjct: 24103601 ccggggcccatgaacaccggccgcccccagccgaagtcggcgtcgtggatcggcagtcgg 24103542 Query: 370 acccagctggtgaggccgaggttggggcaccggaaagtgtgtgctccacggaccaatgct 429 ||||||||||||||||||||||||||||||||||| ||||| || || ||||||| || Sbjct: 24103541 acccagctggtgaggccgaggttggggcaccggaacgtgtgcgcgccgcggaccagcgcc 24103482 Query: 430 gacaggtc 437 |||||||| Sbjct: 24103481 gacaggtc 24103474 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 tcgaggatcagcttccggaacttct 214 ||||||||||||||||||| ||||| Sbjct: 8114724 tcgaggatcagcttccggagcttct 8114700
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A05 Length = 174290 Score = 254 bits (128), Expect = 2e-64 Identities = 218/248 (87%) Strand = Plus / Minus Query: 190 tcgaggatcagcttccggaacttctccatgtgctccgcctgcaacgagatggcgatggac 249 |||| ||||| ||| |||||||||||||||||||| ||||||| ||||||||| | ||| Sbjct: 62462 tcgaagatcatcttgcggaacttctccatgtgctcggcctgcagcgagatggccaccgac 62403 Query: 250 aggctgccgtccttgctcgcgctcgggaggacgaacgccagcccctcgtacgcgatgccg 309 ||||||||||| ||| ||||| ||||| ||||| || ||||||||||||||||||||| Sbjct: 62402 aggctgccgtcgccgctggcgctggggagcacgaaggcgagcccctcgtacgcgatgccg 62343 Query: 310 ccaggacccatgaacaccggcctcccccagccaaaatcggcgtcgtggatcggcaggcgc 369 || || |||||||||||||||| ||||||||| || |||||||||||||||||||| || Sbjct: 62342 ccggggcccatgaacaccggccgcccccagccgaagtcggcgtcgtggatcggcagtcgg 62283 Query: 370 acccagctggtgaggccgaggttggggcaccggaaagtgtgtgctccacggaccaatgct 429 ||||||||||||||||||||||||||||||||||| ||||| || || ||||||| || Sbjct: 62282 acccagctggtgaggccgaggttggggcaccggaacgtgtgcgcgccgcggaccagcgcc 62223 Query: 430 gacaggtc 437 |||||||| Sbjct: 62222 gacaggtc 62215
>dbj|AK104319.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-E04, full insert sequence Length = 1671 Score = 254 bits (128), Expect = 2e-64 Identities = 218/248 (87%) Strand = Plus / Minus Query: 190 tcgaggatcagcttccggaacttctccatgtgctccgcctgcaacgagatggcgatggac 249 |||| ||||| ||| |||||||||||||||||||| ||||||| ||||||||| | ||| Sbjct: 1429 tcgaagatcatcttgcggaacttctccatgtgctcggcctgcagcgagatggccaccgac 1370 Query: 250 aggctgccgtccttgctcgcgctcgggaggacgaacgccagcccctcgtacgcgatgccg 309 ||||||||||| ||| ||||| ||||| ||||| || ||||||||||||||||||||| Sbjct: 1369 aggctgccgtcgccgctggcgctggggagcacgaaggcgagcccctcgtacgcgatgccg 1310 Query: 310 ccaggacccatgaacaccggcctcccccagccaaaatcggcgtcgtggatcggcaggcgc 369 || || |||||||||||||||| ||||||||| || |||||||||||||||||||| || Sbjct: 1309 ccggggcccatgaacaccggccgcccccagccgaagtcggcgtcgtggatcggcagtcgg 1250 Query: 370 acccagctggtgaggccgaggttggggcaccggaaagtgtgtgctccacggaccaatgct 429 ||||||||||||||||||||||||||||||||||| ||||| || || ||||||| || Sbjct: 1249 acccagctggtgaggccgaggttggggcaccggaacgtgtgcgcgccgcggaccagcgcc 1190 Query: 430 gacaggtc 437 |||||||| Sbjct: 1189 gacaggtc 1182
>dbj|AK060705.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-G09, full insert sequence Length = 1714 Score = 252 bits (127), Expect = 8e-64 Identities = 208/235 (88%) Strand = Plus / Minus Query: 190 tcgaggatcagcttccggaacttctccatgtgctccgcctgcaacgagatggcgatggac 249 |||| ||||| ||| |||||||||||||||||||| ||||||| ||||||||| | ||| Sbjct: 1427 tcgaagatcatcttgcggaacttctccatgtgctcggcctgcagcgagatggccaccgac 1368 Query: 250 aggctgccgtccttgctcgcgctcgggaggacgaacgccagcccctcgtacgcgatgccg 309 ||||||||||| ||| ||||| ||||| ||||| || ||||||||||||||||||||| Sbjct: 1367 aggctgccgtcgccgctggcgctggggagcacgaaggcgagcccctcgtacgcgatgccg 1308 Query: 310 ccaggacccatgaacaccggcctcccccagccaaaatcggcgtcgtggatcggcaggcgc 369 || || |||||||||||||||| ||||||||| || |||||||||||||||||||| || Sbjct: 1307 ccggggcccatgaacaccggccgcccccagccgaagtcggcgtcgtggatcggcagtcgg 1248 Query: 370 acccagctggtgaggccgaggttggggcaccggaaagtgtgtgctccacggacca 424 ||||||||||||||||||||||||||||||||||| ||||| || || ||||||| Sbjct: 1247 acccagctggtgaggccgaggttggggcaccggaacgtgtgcgcgccgcggacca 1193
>dbj|AB076982.1| Avena sativa AsHHT3 mRNA for hydroxyanthranilate hydroxycinnamoyltransferase 3, complete cds Length = 1659 Score = 246 bits (124), Expect = 5e-62 Identities = 217/248 (87%) Strand = Plus / Minus Query: 190 tcgaggatcagcttccggaacttctccatgtgctccgcctgcaacgagatggcgatggac 249 |||| ||||| |||||||||||||||||||||||| ||||||| ||||||||| | ||| Sbjct: 1322 tcgaagatcatcttccggaacttctccatgtgctcggcctgcagcgagatggccaccgac 1263 Query: 250 aggctgccgtccttgctcgcgctcgggaggacgaacgccagcccctcgtacgcgatgccg 309 ||||||||||| | | ||||| ||||| |||||||| ||||||||||| ||||||||| Sbjct: 1262 aggctgccgtcgcggttggcgctggggagcacgaacgcgagcccctcgtaggcgatgccg 1203 Query: 310 ccaggacccatgaacaccggcctcccccagccaaaatcggcgtcgtggatcggcaggcgc 369 || || ||||||||||| |||| |||||||| || |||||||||||||||||||||||| Sbjct: 1202 ccggggcccatgaacacgggccggccccagccgaagtcggcgtcgtggatcggcaggcgc 1143 Query: 370 acccagctggtgaggccgaggttggggcaccggaaagtgtgtgctccacggaccaatgct 429 |||||||||||||| |||||||||||||||||||| ||||| || || ||||||| || Sbjct: 1142 acccagctggtgagcccgaggttggggcaccggaacgtgtgcgcgccgcggaccagcgcc 1083 Query: 430 gacaggtc 437 |||||||| Sbjct: 1082 gacaggtc 1075
>dbj|AB076981.1| Avena sativa AsHHT2 mRNA for hydroxyanthranilate hydroxycinnamoyltransferase 2, complete cds Length = 1770 Score = 246 bits (124), Expect = 5e-62 Identities = 217/248 (87%) Strand = Plus / Minus Query: 190 tcgaggatcagcttccggaacttctccatgtgctccgcctgcaacgagatggcgatggac 249 |||| ||||| |||||||||||||||||||||||| ||||||| ||||||||| | ||| Sbjct: 1469 tcgaagatcatcttccggaacttctccatgtgctcggcctgcagcgagatggccaccgac 1410 Query: 250 aggctgccgtccttgctcgcgctcgggaggacgaacgccagcccctcgtacgcgatgccg 309 ||||||||||| | | ||||| ||||| ||||| || ||||||||||| ||||||||| Sbjct: 1409 aggctgccgtcgcggttggcgctggggagcacgaaggcgagcccctcgtaggcgatgccg 1350 Query: 310 ccaggacccatgaacaccggcctcccccagccaaaatcggcgtcgtggatcggcaggcgc 369 || || ||||||||||| |||| |||||||| || |||||||||||||||||||||||| Sbjct: 1349 ccggggcccatgaacacgggccggccccagccgaagtcggcgtcgtggatcggcaggcgc 1290 Query: 370 acccagctggtgaggccgaggttggggcaccggaaagtgtgtgctccacggaccaatgct 429 |||||||||||||| |||||||||||||||||||| |||||||| || ||||||| ||| Sbjct: 1289 acccagctggtgagcccgaggttggggcaccggaacgtgtgtgcgccgcggaccagagct 1230 Query: 430 gacaggtc 437 || ||||| Sbjct: 1229 gataggtc 1222
>dbj|AB076980.1| Avena sativa AsHHT1 mRNA for hydroxyanthranilate hydroxycinnamoyltransferase 1, complete cds Length = 1755 Score = 238 bits (120), Expect = 1e-59 Identities = 216/248 (87%) Strand = Plus / Minus Query: 190 tcgaggatcagcttccggaacttctccatgtgctccgcctgcaacgagatggcgatggac 249 |||| ||||| |||||||||||||||||||||||| ||||||| ||||||||| | ||| Sbjct: 1449 tcgaagatcatcttccggaacttctccatgtgctcggcctgcagcgagatggccaccgac 1390 Query: 250 aggctgccgtccttgctcgcgctcgggaggacgaacgccagcccctcgtacgcgatgccg 309 ||||||||||| | | ||||| ||||| ||||| || ||||||||||| ||||||||| Sbjct: 1389 aggctgccgtcgcggttggcgctggggagcacgaaggcgagcccctcgtaggcgatgccg 1330 Query: 310 ccaggacccatgaacaccggcctcccccagccaaaatcggcgtcgtggatcggcaggcgc 369 || || ||||||||||| |||| |||||||| || |||||||||||||||||||||||| Sbjct: 1329 ccggggcccatgaacacgggccggccccagccgaagtcggcgtcgtggatcggcaggcgc 1270 Query: 370 acccagctggtgaggccgaggttggggcaccggaaagtgtgtgctccacggaccaatgct 429 |||||||||||||| |||||||||||||||||||| ||||| || || ||||||| || Sbjct: 1269 acccagctggtgagcccgaggttggggcaccggaacgtgtgcgcgccgcggaccagcgcc 1210 Query: 430 gacaggtc 437 |||||||| Sbjct: 1209 gacaggtc 1202
>gb|AY109546.1| Zea mays CL531_1 mRNA sequence Length = 1701 Score = 222 bits (112), Expect = 7e-55 Identities = 186/211 (88%) Strand = Plus / Minus Query: 199 agcttccggaacttctccatgtgctccgcctgcaacgagatggcgatggacaggctgccg 258 |||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 1460 agcttccggaacttctccatgtgctccgcctgcagcgagatggccacggacaggctgccg 1401 Query: 259 tccttgctcgcgctcgggaggacgaacgccagcccctcgtacgcgatgccgccaggaccc 318 || | | ||||| ||||| |||||||| ||||||||||| ||||||||||| || ||| Sbjct: 1400 tcgcggttggcgctggggagcacgaacgcgagcccctcgtaggcgatgccgccggggccc 1341 Query: 319 atgaacaccggcctcccccagccaaaatcggcgtcgtggatcggcaggcgcacccagctg 378 |||||||| |||| ||||| || || || ||||||||||| |||||||||||||||||| Sbjct: 1340 atgaacacgggccgnccccacccgaagtccgcgtcgtggatgggcaggcgcacccagctg 1281 Query: 379 gtgaggccgaggttggggcaccggaaagtgt 409 ||||| || ||||||||||||||||| |||| Sbjct: 1280 gtgagccccaggttggggcaccggaacgtgt 1250
>ref|XM_707005.1| Candida albicans SC5314 putative ubiquitin-conjugating enzyme Ubc1p (CaO19.1085), mRNA Length = 699 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 tattgatatcccacaagaata 43 ||||||||||||||||||||| Sbjct: 165 tattgatatcccacaagaata 185
>ref|XM_706980.1| Candida albicans SC5314 putative ubiquitin-conjugating enzyme Ubc1p (CaO19.8686), mRNA Length = 693 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 tattgatatcccacaagaata 43 ||||||||||||||||||||| Sbjct: 165 tattgatatcccacaagaata 185
>emb|CR962133.1| Medicago truncatula chromosome 5 clone mth2-17h8, COMPLETE SEQUENCE Length = 114811 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 tatatataccccccagaaaaa 122 ||||||||||||||||||||| Sbjct: 104525 tatatataccccccagaaaaa 104505
>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16 Length = 347786 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 gtcgtggatcggcaggcgcac 371 ||||||||||||||||||||| Sbjct: 25455 gtcgtggatcggcaggcgcac 25475
>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14 Length = 349146 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 gtcgtggatcggcaggcgcac 371 ||||||||||||||||||||| Sbjct: 29162 gtcgtggatcggcaggcgcac 29182
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 cgtcgtggatcggcaggcgca 370 ||||||||||||||||||||| Sbjct: 4121740 cgtcgtggatcggcaggcgca 4121720
>gb|AE004627.1| Pseudomonas aeruginosa PAO1, section 188 of 529 of the complete genome Length = 12776 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 cgtcgtggatcggcaggcgca 370 ||||||||||||||||||||| Sbjct: 1292 cgtcgtggatcggcaggcgca 1312
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 tcgaggatcagcttccggaacttct 214 ||||||||||||||||||| ||||| Sbjct: 102917 tcgaggatcagcttccggagcttct 102893
>dbj|AK065504.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027C16, full insert sequence Length = 1823 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 tcgaggatcagcttccggaacttct 214 ||||||||||||||||||| ||||| Sbjct: 406 tcgaggatcagcttccggagcttct 382
>gb|AC111080.9| Mus musculus chromosome 3, clone RP23-132D7, complete sequence Length = 202074 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 ttaatctgaaactccaggcat 102 ||||||||||||||||||||| Sbjct: 117286 ttaatctgaaactccaggcat 117306
>ref|NM_103747.2| Arabidopsis thaliana unknown protein AT1G48510 mRNA, complete cds Length = 1419 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 tgaaactccaggcatatata 107 |||||||||||||||||||| Sbjct: 708 tgaaactccaggcatatata 727
>gb|AC004636.1| Homo sapiens chromosome 5, P1 clone 1268h6 (LBNL H50), complete sequence Length = 78293 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 ttgccctgtaaaacttttct 166 |||||||||||||||||||| Sbjct: 15896 ttgccctgtaaaacttttct 15877
>gb|AC114819.4| Mus musculus BAC clone RP23-52J20 from chromosome 8, complete sequence Length = 204239 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 aggcatatatatacccccca 116 |||||||||||||||||||| Sbjct: 111084 aggcatatatatacccccca 111103
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 230 gcaacgagatggcgatggacaggctgcc 257 ||||||||||| ||||| |||||||||| Sbjct: 3062828 gcaacgagatgtcgatgcacaggctgcc 3062801
>dbj|AK005965.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700013M09 product:islet cell autoantigen 1, 69 kDa, full insert sequence Length = 962 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 196 atcagcttccggaacttctccatgtgct 223 |||||||||| |||||||||||| |||| Sbjct: 775 atcagcttcctgaacttctccatttgct 748
>gb|AC009147.9| Homo sapiens chromosome 16 clone RP11-55H18, complete sequence Length = 163719 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ccacaagaataagattatgt 52 |||||||||||||||||||| Sbjct: 13128 ccacaagaataagattatgt 13147
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 ggaggacgaacgccagcccc 294 |||||||||||||||||||| Sbjct: 156719 ggaggacgaacgccagcccc 156700
>gb|AC092121.3| Homo sapiens chromosome 16 clone RP11-102D18, complete sequence Length = 150955 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ccacaagaataagattatgt 52 |||||||||||||||||||| Sbjct: 131616 ccacaagaataagattatgt 131635
>gb|AC020889.3|AC020889 Genomic sequence for Arabidopsis thaliana BAC T1N15 from chromosome I, complete sequence Length = 95295 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 tgaaactccaggcatatata 107 |||||||||||||||||||| Sbjct: 51000 tgaaactccaggcatatata 51019 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,255,677 Number of Sequences: 3902068 Number of extensions: 3255677 Number of successful extensions: 55912 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 55704 Number of HSP's gapped (non-prelim): 204 length of query: 437 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 415 effective length of database: 17,147,199,772 effective search space: 7116087905380 effective search space used: 7116087905380 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)