Clone Information

BLAST Search Result

Clone Name	rbaet23e05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	emb\|Y15962.1\|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1	444	e-122
2	emb\|AJ291451.1\|HVU291451 Hordeum vulgare mRNA for adenosine diph...	418	e-114
3	emb\|AJ319659.1\|TAE319659 Triticum aestivum mRNA for adenosine di...	371	e-100
4	ref\|XM_482788.1\| Oryza sativa (japonica cultivar-group), mRNA	276	3e-71
5	ref\|XM_507258.1\| PREDICTED Oryza sativa (japonica cultivar-group...	276	3e-71
6	dbj\|AP008214.1\| Oryza sativa (japonica cultivar-group) genomic D...	276	3e-71
7	dbj\|AP004707.4\| Oryza sativa (japonica cultivar-group) genomic D...	276	3e-71
8	dbj\|AP004586.3\| Oryza sativa (japonica cultivar-group) genomic D...	276	3e-71
9	dbj\|AK104729.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	276	3e-71
10	dbj\|AK065284.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	276	3e-71
11	gb\|AF051156.1\|AF051156 Oryza sativa germin-like protein (GLP110)...	276	3e-71
12	gb\|AF032975.1\|AF032975 Oryza sativa germin-like protein 5 (GER5)...	276	3e-71
13	dbj\|AB015593.1\| Oryza sativa OsGLP1 gene for germin-like protein...	276	3e-71
14	dbj\|AB010876.1\| Oryza sativa OsGLP1 mRNA for germin-like protein...	236	2e-59
15	gb\|AY394010.1\| Zea mays germin-like protein (glp1) gene, promote...	228	6e-57
16	gb\|AY112552.1\| Zea mays CL11523_1 mRNA sequence	143	3e-31
17	ref\|XM_482785.1\| Oryza sativa (japonica cultivar-group), mRNA	78	1e-11
18	ref\|XM_471594.1\| Oryza sativa (japonica cultivar-group), predic...	46	0.047
19	emb\|AL731615.4\|OSJN00256 Oryza sativa genomic DNA, chromosome 4,...	46	0.047
20	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	46	0.047
21	dbj\|BA000040.2\| Bradyrhizobium japonicum USDA 110 DNA, complete ...	44	0.19
22	gb\|AY299121.1\| Xanthomonas oryzae bacteriophage Xp10 genomic DNA...	42	0.74
23	emb\|AL939114.1\|SCO939114 Streptomyces coelicolor A3(2) complete ...	42	0.74
24	gb\|CP000110.1\| Synechococcus sp. CC9605, complete genome	40	2.9
25	gb\|CP000151.1\| Burkholderia sp. 383 chromosome 1, complete sequence	40	2.9
26	gb\|AF030001.1\|MMMHC29N7 Mus musculus major histocompatibility lo...	40	2.9
27	gb\|AF049850.1\|MMHC438N12 Mus musculus major histocompatibility l...	40	2.9
28	ref\|XR_002034.1\| PREDICTED: Mus musculus similar to Cytochrome P...	40	2.9
29	gb\|CP000353.1\| Ralstonia metallidurans CH34 megaplasmid, complet...	40	2.9
30	dbj\|AB010266.1\| Mus musculus Creb-rp, Tnx and Cyp21 genes for cA...	40	2.9
31	dbj\|AK146565.1\| Mus musculus 17 days pregnant adult female amnio...	40	2.9
32	gb\|AY613781.1\| Mus musculus strain C57BL/10J truncated steroid 2...	40	2.9
33	gb\|AC139676.3\| Homo sapiens chromosome 8, clone RP13-648O9, comp...	40	2.9
34	gb\|DQ341430.1\| Lynx lynx steroid 21-hydroxylase gene, complete cds	40	2.9
35	gb\|AC006289.1\|AC006289 Mus musculus chromosome 17, clone 29_N_7,...	40	2.9
36	gb\|CP000086.1\| Burkholderia thailandensis E264 chromosome I, com...	40	2.9
37	emb\|CT025759.14\| Mouse DNA sequence from clone RP24-317H19 on ch...	40	2.9
38	emb\|CT573030.2\| Mouse DNA sequence from clone RP24-100B3 on chro...	40	2.9
39	ref\|NM_009995.1\| Mus musculus cytochrome P450, family 21, subfam...	40	2.9
40	gb\|M64933.1\|MUSSLPSEXB Mouse nonfunctional sex-limited protein, ...	40	2.9
41	gb\|M73820.1\|MUSSLPSEXA Mouse sex-limited protein (SlpA) gene, ex...	40	2.9
42	gb\|M15008.1\|MUS21OHA2 Mouse steroid 21-hydroxylase B (21-OHase B...	40	2.9
43	gb\|M15009.1\|MUS21OHA1 Mouse steroid 21-hydroxylase A (21-OHase A...	40	2.9

>emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1
          Length = 833

 Score =  444 bits (224), Expect = e-122
 Identities = 227/228 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttaattagccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 cttaattagccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaag 615

                                                                       
Query: 61  aaggtgaccttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtg 120
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aaggtgaccttctcaacgacggcggatggcaggttgttggcgaagagcgcgtagtcagtg 555

                                                                       
Query: 121 atctggaggcctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 atctggaggcctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgcca 495

                                                           
Query: 181 ccgttgtactggtagtggagcaggccctgggggaacaccatgatgtcg 228
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ccgttgtactggtagtggagcaggccctgggggaacaccatgatgtcg 447

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>emb|AJ291451.1|HVU291451 Hordeum vulgare mRNA for adenosine diphosphate glucose
           pyrophosphatase (sagppase gene)
          Length = 639

 Score =  418 bits (211), Expect = e-114
 Identities = 220/223 (98%)
 Strand = Plus / Minus

                                                                       
Query: 6   ttagccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggt 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 ttagccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggt 580

                                                                       
Query: 66  gaccttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctg 125
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gaccttctcaacgacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctg 520

                                                                       
Query: 126 gaggcctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgtt 185
           |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 519 gaggcctgggttggggccgctgaacgcaacgagcgctaccgcggaggagctgccaccgtt 460

                                                      
Query: 186 gtactggtagtggagcaggccctgggggaacaccatgatgtcg 228
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gtactggtagtggagcaggccctgggggaacaccatgatgtcg 417

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>emb|AJ319659.1|TAE319659 Triticum aestivum mRNA for adenosine diphosphate glucose
           pyrophosphatase
          Length = 642

 Score =  371 bits (187), Expect = e-100
 Identities = 214/223 (95%)
 Strand = Plus / Minus

                                                                       
Query: 6   ttagccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggt 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ttagccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggt 583

                                                                       
Query: 66  gaccttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctg 125
           |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gaccttctcaacgacggcggacggcaggttgttggcgaagagcgcgtagtcagtgatctg 523

                                                                       
Query: 126 gaggcctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgtt 185
            ||||| ||||||||||||||||||||||||||||| ||||| || |||| ||| |||||
Sbjct: 522 caggccggggttggggccgctgaacgcaacgagcgccaccgctgccgagccgccgccgtt 463

                                                      
Query: 186 gtactggtagtggagcaggccctgggggaacaccatgatgtcg 228
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gtactggtagtggagcaggccctgggggaacaccatgatgtcg 420

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>ref|XM_482788.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 938

 Score =  276 bits (139), Expect = 3e-71
 Identities = 199/219 (90%)
 Strand = Plus / Minus

                                                                       
Query: 10  ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 69
           ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 680

                                                                       
Query: 70  ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 129
           ||||| || | |||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 679 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 620

                                                                       
Query: 130 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 189
           || ||||||||||||||||| || |||||||| |||||||| ||   |||  ||||||||
Sbjct: 619 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 560

                                                  
Query: 190 tggtagtggagcaggccctgggggaacaccatgatgtcg 228
           |||||||| || |||||||||||||||||||||||||||
Sbjct: 559 tggtagtgcaggaggccctgggggaacaccatgatgtcg 521

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>ref|XM_507258.1| PREDICTED Oryza sativa (japonica cultivar-group), P0493A04.40 mRNA
          Length = 994

 Score =  276 bits (139), Expect = 3e-71
 Identities = 199/219 (90%)
 Strand = Plus / Minus

                                                                       
Query: 10  ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 69
           ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 669

                                                                       
Query: 70  ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 129
           ||||| || | |||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 668 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 609

                                                                       
Query: 130 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 189
           || ||||||||||||||||| || |||||||| |||||||| ||   |||  ||||||||
Sbjct: 608 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 549

                                                  
Query: 190 tggtagtggagcaggccctgggggaacaccatgatgtcg 228
           |||||||| || |||||||||||||||||||||||||||
Sbjct: 548 tggtagtgcaggaggccctgggggaacaccatgatgtcg 510

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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  276 bits (139), Expect = 3e-71
 Identities = 199/219 (90%)
 Strand = Plus / Plus

                                                                            
Query: 10       ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 69
                ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22551065 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 22551124

                                                                            
Query: 70       ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 129
                ||||| || | |||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 22551125 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 22551184

                                                                            
Query: 130      cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 189
                || ||||||||||||||||| || |||||||| |||||||| ||   |||  ||||||||
Sbjct: 22551185 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 22551244

                                                       
Query: 190      tggtagtggagcaggccctgggggaacaccatgatgtcg 228
                |||||||| || |||||||||||||||||||||||||||
Sbjct: 22551245 tggtagtgcaggaggccctgggggaacaccatgatgtcg 22551283



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 108/131 (82%)
 Strand = Plus / Plus

                                                                            
Query: 88       ggcaggttgttggcgaagagcgcgtagtcagtgatctggaggcctgggttggggccgctg 147
                |||||||||||||||||||||||||||||   |||||| ||||| ||||| | || ||||
Sbjct: 22546182 ggcaggttgttggcgaagagcgcgtagtcgaggatctgcaggccggggttcgagctgctg 22546241

                                                                            
Query: 148      aacgcaacgagcgctaccgccgcggagctgccaccgttgtactggtagtggagcaggccc 207
                 ||||  ||| ||| |||||||  | |  |||   |||||||||| ||||||||||||||
Sbjct: 22546242 tacgccgcgaacgccaccgccgtcgtgtcgccggtgttgtactggaagtggagcaggccc 22546301

                           
Query: 208      tgggggaacac 218
                || ||||||||
Sbjct: 22546302 tgcgggaacac 22546312

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>dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0690E03
          Length = 139924

 Score =  276 bits (139), Expect = 3e-71
 Identities = 199/219 (90%)
 Strand = Plus / Plus

                                                                         
Query: 10    ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 69
             ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24566 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 24625

                                                                         
Query: 70    ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 129
             ||||| || | |||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 24626 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 24685

                                                                         
Query: 130   cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 189
             || ||||||||||||||||| || |||||||| |||||||| ||   |||  ||||||||
Sbjct: 24686 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 24745

                                                    
Query: 190   tggtagtggagcaggccctgggggaacaccatgatgtcg 228
             |||||||| || |||||||||||||||||||||||||||
Sbjct: 24746 tggtagtgcaggaggccctgggggaacaccatgatgtcg 24784



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 108/131 (82%)
 Strand = Plus / Plus

                                                                         
Query: 88    ggcaggttgttggcgaagagcgcgtagtcagtgatctggaggcctgggttggggccgctg 147
             |||||||||||||||||||||||||||||   |||||| ||||| ||||| | || ||||
Sbjct: 19683 ggcaggttgttggcgaagagcgcgtagtcgaggatctgcaggccggggttcgagctgctg 19742

                                                                         
Query: 148   aacgcaacgagcgctaccgccgcggagctgccaccgttgtactggtagtggagcaggccc 207
              ||||  ||| ||| |||||||  | |  |||   |||||||||| ||||||||||||||
Sbjct: 19743 tacgccgcgaacgccaccgccgtcgtgtcgccggtgttgtactggaagtggagcaggccc 19802

                        
Query: 208   tgggggaacac 218
             || ||||||||
Sbjct: 19803 tgcgggaacac 19813

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>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0493A04
          Length = 149367

 Score =  276 bits (139), Expect = 3e-71
 Identities = 199/219 (90%)
 Strand = Plus / Plus

                                                                          
Query: 10     ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 69
              ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145993 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 146052

                                                                          
Query: 70     ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 129
              ||||| || | |||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 146053 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 146112

                                                                          
Query: 130    cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 189
              || ||||||||||||||||| || |||||||| |||||||| ||   |||  ||||||||
Sbjct: 146113 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 146172

                                                     
Query: 190    tggtagtggagcaggccctgggggaacaccatgatgtcg 228
              |||||||| || |||||||||||||||||||||||||||
Sbjct: 146173 tggtagtgcaggaggccctgggggaacaccatgatgtcg 146211



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 108/131 (82%)
 Strand = Plus / Plus

                                                                          
Query: 88     ggcaggttgttggcgaagagcgcgtagtcagtgatctggaggcctgggttggggccgctg 147
              |||||||||||||||||||||||||||||   |||||| ||||| ||||| | || ||||
Sbjct: 141110 ggcaggttgttggcgaagagcgcgtagtcgaggatctgcaggccggggttcgagctgctg 141169

                                                                          
Query: 148    aacgcaacgagcgctaccgccgcggagctgccaccgttgtactggtagtggagcaggccc 207
               ||||  ||| ||| |||||||  | |  |||   |||||||||| ||||||||||||||
Sbjct: 141170 tacgccgcgaacgccaccgccgtcgtgtcgccggtgttgtactggaagtggagcaggccc 141229

                         
Query: 208    tgggggaacac 218
              || ||||||||
Sbjct: 141230 tgcgggaacac 141240

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>dbj|AK104729.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C02, full
           insert sequence
          Length = 938

 Score =  276 bits (139), Expect = 3e-71
 Identities = 199/219 (90%)
 Strand = Plus / Minus

                                                                       
Query: 10  ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 69
           ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 680

                                                                       
Query: 70  ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 129
           ||||| || | |||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 679 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 620

                                                                       
Query: 130 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 189
           || ||||||||||||||||| || |||||||| |||||||| ||   |||  ||||||||
Sbjct: 619 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 560

                                                  
Query: 190 tggtagtggagcaggccctgggggaacaccatgatgtcg 228
           |||||||| || |||||||||||||||||||||||||||
Sbjct: 559 tggtagtgcaggaggccctgggggaacaccatgatgtcg 521

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>dbj|AK065284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M08, full
           insert sequence
          Length = 994

 Score =  276 bits (139), Expect = 3e-71
 Identities = 199/219 (90%)
 Strand = Plus / Minus

                                                                       
Query: 10  ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 69
           ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 669

                                                                       
Query: 70  ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 129
           ||||| || | |||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 668 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 609

                                                                       
Query: 130 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 189
           || ||||||||||||||||| || |||||||| |||||||| ||   |||  ||||||||
Sbjct: 608 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 549

                                                  
Query: 190 tggtagtggagcaggccctgggggaacaccatgatgtcg 228
           |||||||| || |||||||||||||||||||||||||||
Sbjct: 548 tggtagtgcaggaggccctgggggaacaccatgatgtcg 510

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>gb|AF051156.1|AF051156 Oryza sativa germin-like protein (GLP110) mRNA, complete cds
          Length = 1004

 Score =  276 bits (139), Expect = 3e-71
 Identities = 199/219 (90%)
 Strand = Plus / Minus

                                                                       
Query: 10  ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 69
           ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 661

                                                                       
Query: 70  ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 129
           ||||| || | |||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 660 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 601

                                                                       
Query: 130 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 189
           || ||||||||||||||||| || |||||||| |||||||| ||   |||  ||||||||
Sbjct: 600 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 541

                                                  
Query: 190 tggtagtggagcaggccctgggggaacaccatgatgtcg 228
           |||||||| || |||||||||||||||||||||||||||
Sbjct: 540 tggtagtgcaggaggccctgggggaacaccatgatgtcg 502

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>gb|AF032975.1|AF032975 Oryza sativa germin-like protein 5 (GER5) mRNA, complete cds
          Length = 1030

 Score =  276 bits (139), Expect = 3e-71
 Identities = 199/219 (90%)
 Strand = Plus / Minus

                                                                       
Query: 10  ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 69
           ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 682

                                                                       
Query: 70  ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 129
           ||||| || | |||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 681 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 622

                                                                       
Query: 130 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 189
           || ||||||||||||||||| || |||||||| |||||||| ||   |||  ||||||||
Sbjct: 621 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 562

                                                  
Query: 190 tggtagtggagcaggccctgggggaacaccatgatgtcg 228
           |||||||| || |||||||||||||||||||||||||||
Sbjct: 561 tggtagtgcaggaggccctgggggaacaccatgatgtcg 523

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>dbj|AB015593.1| Oryza sativa OsGLP1 gene for germin-like protein 1, complete cds
          Length = 642

 Score =  276 bits (139), Expect = 3e-71
 Identities = 199/219 (90%)
 Strand = Plus / Minus

                                                                       
Query: 10  ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 69
           ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 579

                                                                       
Query: 70  ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 129
           ||||| || | |||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 578 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 519

                                                                       
Query: 130 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 189
           || ||||||||||||||||| || |||||||| |||||||| ||   |||  ||||||||
Sbjct: 518 ccggggttggggccgctgaaggcgacgagcgccaccgccgccgactggccggcgttgtac 459

                                                  
Query: 190 tggtagtggagcaggccctgggggaacaccatgatgtcg 228
           |||||||| || |||||||||||||||||||||||||||
Sbjct: 458 tggtagtgcaggaggccctgggggaacaccatgatgtcg 420

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>dbj|AB010876.1| Oryza sativa OsGLP1 mRNA for germin-like protein 1, complete cds
          Length = 994

 Score =  236 bits (119), Expect = 2e-59
 Identities = 194/219 (88%)
 Strand = Plus / Minus

                                                                       
Query: 10  ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 69
           ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 681

                                                                       
Query: 70  ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 129
           ||||| || | |||||| |||||||||||||||||||| ||||||||  | ||||| || 
Sbjct: 680 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcgttaatctgaagc 621

                                                                       
Query: 130 cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 189
           || |||||||||||||||||  | |||||||| |||||||| ||   |||  ||||||||
Sbjct: 620 ccggggttggggccgctgaagccgacgagcgccaccgccgccgactggccggcgttgtac 561

                                                  
Query: 190 tggtagtggagcaggccctgggggaacaccatgatgtcg 228
           |||||||| || |||||||||||||||||||||||||||
Sbjct: 560 tggtagtgcaggaggccctgggggaacaccatgatgtcg 522

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>gb|AY394010.1| Zea mays germin-like protein (glp1) gene, promoter region and
            complete cds
          Length = 2490

 Score =  228 bits (115), Expect = 6e-57
 Identities = 193/219 (88%)
 Strand = Plus / Minus

                                                                        
Query: 10   ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 69
            |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2089 ccgctgccgccgagcacactcttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 2030

                                                                        
Query: 70   ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 129
            ||||| || |||||||| || ||||||||||| ||||||||  |||| |||||||| |||
Sbjct: 2029 ttctccacgacggcggacgggaggttgttggcaaagagcgcaaagtcggtgatctgcagg 1970

                                                                        
Query: 130  cctgggttggggccgctgaacgcaacgagcgctaccgccgcggagctgccaccgttgtac 189
            || |||||||||| |||||| || |||||  | || || |||  | ||||  ||||||||
Sbjct: 1969 ccggggttggggctgctgaaggcgacgaggcccacggcagcgccggtgccggcgttgtac 1910

                                                   
Query: 190  tggtagtggagcaggccctgggggaacaccatgatgtcg 228
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 1909 tggtagtggagcaggccctgggggaacaccatgatgtcg 1871

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>gb|AY112552.1| Zea mays CL11523_1 mRNA sequence
          Length = 544

 Score =  143 bits (72), Expect = 3e-31
 Identities = 151/179 (84%)
 Strand = Plus / Plus

                                                                       
Query: 47  gcgcgtcgtccaagaaggtgaccttctcaaccacggcggatggcaggttgttggcgaaga 106
           |||||||||||||||||||||||||||| || |||||||| || ||||||||||| ||||
Sbjct: 366 gcgcgtcgtccaagaaggtgaccttctccacgacggcggacgggaggttgttggcaaaga 425

                                                                       
Query: 107 gcgcgtagtcagtgatctggaggcctgggttggggccgctgaacgcaacgagcgctaccg 166
           ||||  |||| |||||||| ||||| |||||||||| |||||| || |||||  | || |
Sbjct: 426 gcgcaaagtcggtgatctgcaggccggggttggggctgctgaaggcgacgaggcccacgg 485

                                                                      
Query: 167 ccgcggagctgccaccgttgtactggtagtggagcaggccctgggggaacaccatgatg 225
           | |||  | ||||  |||||||||||||||||||||||||||     ||||||||||||
Sbjct: 486 cagcgccggtgccggcgttgtactggtagtggagcaggccctnnnnnaacaccatgatg 544

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>ref|XM_482785.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 660

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 108/131 (82%)
 Strand = Plus / Minus

                                                                       
Query: 88  ggcaggttgttggcgaagagcgcgtagtcagtgatctggaggcctgggttggggccgctg 147
           |||||||||||||||||||||||||||||   |||||| ||||| ||||| | || ||||
Sbjct: 578 ggcaggttgttggcgaagagcgcgtagtcgaggatctgcaggccggggttcgagctgctg 519

                                                                       
Query: 148 aacgcaacgagcgctaccgccgcggagctgccaccgttgtactggtagtggagcaggccc 207
            ||||  ||| ||| |||||||  | |  |||   |||||||||| ||||||||||||||
Sbjct: 518 tacgccgcgaacgccaccgccgtcgtgtcgccggtgttgtactggaagtggagcaggccc 459

                      
Query: 208 tgggggaacac 218
           || ||||||||
Sbjct: 458 tgcgggaacac 448

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>ref|XM_471594.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1299

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 91  aggttgttggcgaagagcgcgtagtcagtgatctg 125
           ||||||||||||||||||||| ||||  |||||||
Sbjct: 581 aggttgttggcgaagagcgcgaagtccatgatctg 547

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>emb|AL731615.4|OSJN00256 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065J03,
             complete sequence
          Length = 144146

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 91    aggttgttggcgaagagcgcgtagtcagtgatctg 125
             ||||||||||||||||||||| ||||  |||||||
Sbjct: 38184 aggttgttggcgaagagcgcgaagtccatgatctg 38150

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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 91       aggttgttggcgaagagcgcgtagtcagtgatctg 125
                ||||||||||||||||||||| ||||  |||||||
Sbjct: 12556041 aggttgttggcgaagagcgcgaagtccatgatctg 12556075

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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 11      cgctgccgccgagcacggacttgagc 36
               |||||||||||||||||| |||||||
Sbjct: 7136995 cgctgccgccgagcacggccttgagc 7137020

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>gb|AY299121.1| Xanthomonas oryzae bacteriophage Xp10 genomic DNA, complete genome
          Length = 44373

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    agcttcttcacctgcgcgtcg 54
             |||||||||||||||||||||
Sbjct: 10658 agcttcttcacctgcgcgtcg 10638

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>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 33     gagcttcttcacctgcgcgtcgtcc 57
              |||||||||||||| ||||||||||
Sbjct: 305483 gagcttcttcaccttcgcgtcgtcc 305507

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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 195     gtggagcaggccctggggga 214
               ||||||||||||||||||||
Sbjct: 1620051 gtggagcaggccctggggga 1620032

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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 36      cttcttcacctgcgcgtcgt 55
               ||||||||||||||||||||
Sbjct: 2254715 cttcttcacctgcgcgtcgt 2254734

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>gb|AF030001.1|MMMHC29N7 Mus musculus major histocompatibility locus class III
              region:butyrophilin-like protein gene, partial cds; Notch4,
              PBX2, RAGE, lysophatidic acid acyl transferase-alpha,
              palmitoyl-protein thioesterase 2 (PPT2), CREB-RP, and
              tenascin X (TNX) genes, complete cds; and CYP21OHB
              pseudogene, complete sequence
          Length = 201964

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    tctggaggcctgggttgggg 141
              ||||||||||||||||||||
Sbjct: 197488 tctggaggcctgggttgggg 197507

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>gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility locus class III region:
             complement C4 (C4) and cytochrome P450 hydroxylase A
             (CYP21OH-A) genes, complete cds; slp pseudogene, complete
             sequence; NG6, SKI, and complement factor B (Bf) genes,
             complete cds; and complement factor C2 (C2) gene, partial
             cds
          Length = 149886

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   tctggaggcctgggttgggg 141
             ||||||||||||||||||||
Sbjct: 77548 tctggaggcctgggttgggg 77567

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>ref|XR_002034.1| PREDICTED: Mus musculus similar to Cytochrome P450 XXI (Steroid
           21-hydroxylase) (21-OHase) (P450-C21) (P-450c21)
           (LOC632302), mRNA
          Length = 1732

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 122 tctggaggcctgggttgggg 141
           ||||||||||||||||||||
Sbjct: 917 tctggaggcctgggttgggg 898

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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 9       gccgctgccgccgagcacgg 28
               ||||||||||||||||||||
Sbjct: 2457731 gccgctgccgccgagcacgg 2457712

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>dbj|AB010266.1| Mus musculus Creb-rp, Tnx and Cyp21 genes for cAMP response element
             binding protein-related protein, tenascin-X and steroid
             21-hydroxylase, partial cds and complete sequences
          Length = 67977

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   tctggaggcctgggttgggg 141
             ||||||||||||||||||||
Sbjct: 66569 tctggaggcctgggttgggg 66588

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>dbj|AK146565.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN
           full-length enriched library, clone:I920026N02
           product:cytochrome P450, family 21, subfamily a,
           polypeptide 1, full insert sequence
          Length = 2053

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 122 tctggaggcctgggttgggg 141
           ||||||||||||||||||||
Sbjct: 822 tctggaggcctgggttgggg 803

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>gb|AY613781.1| Mus musculus strain C57BL/10J truncated steroid 21-hydroxylase
            (Cyp21a1) gene, complete cds
          Length = 3261

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 122  tctggaggcctgggttgggg 141
            ||||||||||||||||||||
Sbjct: 1511 tctggaggcctgggttgggg 1492

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>gb|AC139676.3| Homo sapiens chromosome 8, clone RP13-648O9, complete sequence
          Length = 166153

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   tggaggcctgggttggggcc 143
             ||||||||||||||||||||
Sbjct: 10496 tggaggcctgggttggggcc 10515

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>gb|DQ341430.1| Lynx lynx steroid 21-hydroxylase gene, complete cds
          Length = 2955

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 122  tctggaggcctgggttgggg 141
            ||||||||||||||||||||
Sbjct: 1335 tctggaggcctgggttgggg 1316

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>gb|AC006289.1|AC006289 Mus musculus chromosome 17, clone 29_N_7, complete sequence
          Length = 201986

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    tctggaggcctgggttgggg 141
              ||||||||||||||||||||
Sbjct: 197509 tctggaggcctgggttgggg 197528

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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 36      cttcttcacctgcgcgtcgt 55
               ||||||||||||||||||||
Sbjct: 2421518 cttcttcacctgcgcgtcgt 2421499

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>emb|CT025759.14| Mouse DNA sequence from clone RP24-317H19 on chromosome 17, complete
             sequence
          Length = 171682

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   tctggaggcctgggttgggg 141
             ||||||||||||||||||||
Sbjct: 31075 tctggaggcctgggttgggg 31094

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>emb|CT573030.2| Mouse DNA sequence from clone RP24-100B3 on chromosome 17, complete
             sequence
          Length = 111957

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   tctggaggcctgggttgggg 141
             ||||||||||||||||||||
Sbjct: 59098 tctggaggcctgggttgggg 59117

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>ref|NM_009995.1| Mus musculus cytochrome P450, family 21, subfamily a, polypeptide 1
           (Cyp21a1), mRNA
          Length = 1464

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 122 tctggaggcctgggttgggg 141
           ||||||||||||||||||||
Sbjct: 658 tctggaggcctgggttgggg 639

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>gb|M64933.1|MUSSLPSEXB Mouse nonfunctional sex-limited protein, and cytochrome P-450 (Cyp21)
             genes, complete cds
          Length = 26307

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   tctggaggcctgggttgggg 141
             ||||||||||||||||||||
Sbjct: 24358 tctggaggcctgggttgggg 24339

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>gb|M73820.1|MUSSLPSEXA Mouse sex-limited protein (SlpA) gene, exons 24-41, and cytochrome
             P-450 (Cyp21(w7A)) gene, exons 1-7
          Length = 12544

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   tctggaggcctgggttgggg 141
             ||||||||||||||||||||
Sbjct: 12129 tctggaggcctgggttgggg 12110

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>gb|M15008.1|MUS21OHA2 Mouse steroid 21-hydroxylase B (21-OHase B) gene, complete cds
          Length = 3163

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 122  tctggaggcctgggttgggg 141
            ||||||||||||||||||||
Sbjct: 1292 tctggaggcctgggttgggg 1273

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>gb|M15009.1|MUS21OHA1 Mouse steroid 21-hydroxylase A (21-OHase A) gene, complete cds
          Length = 3307

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 122  tctggaggcctgggttgggg 141
            ||||||||||||||||||||
Sbjct: 1516 tctggaggcctgggttgggg 1497


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,560,244
Number of Sequences: 3902068
Number of extensions: 1560244
Number of successful extensions: 30659
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30406
Number of HSP's gapped (non-prelim): 242
length of query: 228
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 206
effective length of database: 17,147,199,772
effective search space: 3532323153032
effective search space used: 3532323153032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result