>ENH3_HUMAN (Q9N2J8) HERV-H_2q24.1 provirus ancestral Env polyprotein precursor|
           (Envelope polyprotein) (Env protein HERV-H/p59)
           (HERV-H/env59) [Contains: Surface protein (SU);
           Transmembrane protein (TM)]
          Length = 555

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +2

Query: 113 SSFATRRL*PVQEIAYYIYRTNNGDADASHEPTA 214
           +SF +  L P +E+ Y++ R++    D SH+P A
Sbjct: 96  TSFNSPHLYPPEELIYFLDRSSKTSPDISHQPAA 129

>NUGC_ANTFO (Q85BB2) NAD(P)H-quinone oxidoreductase chain J, chloroplast (EC|
           1.6.5.-) (NAD(P)H dehydrogenase, chain J)
           (NADH-plastoquinone oxidoreductase subunit J)
          Length = 169

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 87  FDSRKDVLIESAFWLWTFAEHHENKS 10
           F SRK+  I S FW+W  A+  E +S
Sbjct: 100 FVSRKNPKIPSVFWVWKGADFQERES 125


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,465,298
Number of Sequences: 219361
Number of extensions: 568971
Number of successful extensions: 1158
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 80,573,946
effective HSP length: 55
effective length of database: 68,509,091
effective search space used: 1644218184
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)