>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 14      ttattttcatgatgttctgc 33
               ||||||||||||||||||||
Sbjct: 3036451 ttattttcatgatgttctgc 3036432



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 14      ttattttcatgatgttctgc 33
               ||||||||||||||||||||
Sbjct: 1435170 ttattttcatgatgttctgc 1435189

>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 14      ttattttcatgatgttctgc 33
               ||||||||||||||||||||
Sbjct: 1271710 ttattttcatgatgttctgc 1271729

>gb|AC150248.3| Unidentified bacterium clone zdt-9n2, complete sequence
          Length = 36828

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    ttattttcatgatgttctgc 33
             ||||||||||||||||||||
Sbjct: 10044 ttattttcatgatgttctgc 10063

>gb|J02459.1|LAMCG Bacteriophage lambda, complete genome
          Length = 48502

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    ttattttcatgatgttctgc 33
             ||||||||||||||||||||
Sbjct: 10243 ttattttcatgatgttctgc 10262

>gb|AC162947.2| Mus musculus BAC clone RP23-12D16 from chromosome 8, complete sequence
          Length = 230889

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   ttgccaccagaagactctaa 139
             ||||||||||||||||||||
Sbjct: 93845 ttgccaccagaagactctaa 93864

>dbj|AK197276.1| Mus musculus cDNA, clone:Y1G0124J10, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000001974, based on BLAT search
          Length = 256

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 14  ttattttcatgatgttctgc 33
           ||||||||||||||||||||
Sbjct: 219 ttattttcatgatgttctgc 238

>dbj|AP002370.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-160H12, complete
             sequence
          Length = 174697

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    gaaagtccaaagccaaaatg 53
             ||||||||||||||||||||
Sbjct: 48949 gaaagtccaaagccaaaatg 48968

>dbj|AP000773.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-97P20, complete
              sequences
          Length = 170434

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     gaaagtccaaagccaaaatg 53
              ||||||||||||||||||||
Sbjct: 143755 gaaagtccaaagccaaaatg 143774

>gb|U39286.1|CVU39286 Cloning vector TLF97-3, phage lambda lacZ translational fusion vector,
             complete sequence
          Length = 42531

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    ttattttcatgatgttctgc 33
             ||||||||||||||||||||
Sbjct: 10243 ttattttcatgatgttctgc 10262

>gb|U39285.1|CVU39285 Cloning vector TLF97-2, phage lambda lacZ translational fusion vector,
             complete sequence
          Length = 42530

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    ttattttcatgatgttctgc 33
             ||||||||||||||||||||
Sbjct: 10243 ttattttcatgatgttctgc 10262

>gb|U39284.1|CVU39284 Cloning vector TLF97-1, lambda phage lacZ translational fusion vector,
             complete sequence
          Length = 42529

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    ttattttcatgatgttctgc 33
             ||||||||||||||||||||
Sbjct: 10243 ttattttcatgatgttctgc 10262

>gb|U37692.1|CVU37692 Cloning vector lambda TXF97, lacZ transcriptional fusion vector,
             complete sequence
          Length = 42704

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    ttattttcatgatgttctgc 33
             ||||||||||||||||||||
Sbjct: 10243 ttattttcatgatgttctgc 10262

>gb|AC142258.4| Mus musculus BAC clone RP24-511I20 from 13, complete sequence
          Length = 159880

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   agcgtattacatctatagaa 173
             ||||||||||||||||||||
Sbjct: 74776 agcgtattacatctatagaa 74757

>gb|AC127086.4| Mus musculus BAC clone RP24-540I5 from 8, complete sequence
          Length = 161316

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   ttgccaccagaagactctaa 139
             ||||||||||||||||||||
Sbjct: 96950 ttgccaccagaagactctaa 96969

>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 14      ttattttcatgatgttctgc 33
               ||||||||||||||||||||
Sbjct: 1724111 ttattttcatgatgttctgc 1724130

>gb|U02426.1|XXU02426 Cloning vector lambda EMBL3 SP6/T7, left arm
          Length = 20125

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    ttattttcatgatgttctgc 33
             ||||||||||||||||||||
Sbjct: 10243 ttattttcatgatgttctgc 10262

>gb|U02425.1|XXU02425 Cloning vector lambda EMBL3, left arm
          Length = 20067

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    ttattttcatgatgttctgc 33
             ||||||||||||||||||||
Sbjct: 10243 ttattttcatgatgttctgc 10262

>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 14      ttattttcatgatgttctgc 33
               ||||||||||||||||||||
Sbjct: 1640135 ttattttcatgatgttctgc 1640154

>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 14      ttattttcatgatgttctgc 33
               ||||||||||||||||||||
Sbjct: 2557769 ttattttcatgatgttctgc 2557750


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,139,667
Number of Sequences: 3902068
Number of extensions: 2139667
Number of successful extensions: 34179
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34124
Number of HSP's gapped (non-prelim): 55
length of query: 241
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 219
effective length of database: 17,147,199,772
effective search space: 3755236750068
effective search space used: 3755236750068
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)