ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet22d03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY090547.1| Deschampsia antarctica clone Dacor 1.2 unknown mR... 250 1e-63
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 109 3e-21
3dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic D... 109 3e-21
4dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic D... 109 3e-21
5dbj|AK109370.2| Oryza sativa (japonica cultivar-group) cDNA clon... 109 3e-21
6dbj|AK102112.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 3e-21
7gb|AC007866.11| Trypanosoma brucei chromosome 2 clone RPCI93-36E... 42 0.63
8gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence 42 0.63
9ref|XM_946659.1| Trypanosoma brucei TREU927 adenosine transporte... 42 0.63
10gb|AC115724.10| Mus musculus chromosome 3, clone RP23-20L18, com... 40 2.5
11gb|AC162717.3| Equus caballus clone CH241-248O22, complete sequence 40 2.5
12gb|AC115740.8| Mus musculus chromosome 3, clone RP23-476G18, com... 40 2.5
13gb|DP000020.1| Equus caballus target 1 genomic scaffold 40 2.5
14ref|NM_125187.3| Arabidopsis thaliana unknown protein AT5G58020 ... 38 9.8
15gb|AC160962.2| Mus musculus BAC clone RP24-308N16 from chromosom... 38 9.8
16gb|AC123605.8| Mus musculus chromosome 5, clone RP24-176O2, comp... 38 9.8
17ref|XM_946663.1| Trypanosoma brucei TREU927 adenosine transporte... 38 9.8
18emb|CR974572.21| Pig DNA sequence from clone CH242-200F24 on chr... 38 9.8
19gb|BT010560.1| Arabidopsis thaliana At5g58020 gene, complete cds 38 9.8
20gb|AC084859.7| Homo sapiens chromosome 11, clone CTC-497E21, com... 38 9.8
21gb|AC134473.4| Mus musculus BAC clone RP23-190G18 from chromosom... 38 9.8
22gb|AC164439.4| Mus musculus BAC clone RP23-31B24 from chromosome... 38 9.8
23emb|CR936843.10| Mouse DNA sequence from clone RP23-270K2 on chr... 38 9.8
24gb|AC104299.2| Homo sapiens chromosome 3 clone RP11-129K20, comp... 38 9.8
25gb|AY034579.1| Mus musculus cathepsin J (Ctsj) gene, complete cds 38 9.8
26gb|AC013762.6| Homo sapiens, clone RP11-2I1, complete sequence 38 9.8
27gb|AC022113.6| Homo sapiens chromosome 5 clone CTC-461F20, compl... 38 9.8
28gb|AC158242.4| Pan troglodytes BAC clone CH251-354C10 from chrom... 38 9.8
29emb|BX829734.1|CNS0A018 Arabidopsis thaliana Full-length cDNA Co... 38 9.8
30emb|BX831485.1|CNS09ZJ1 Arabidopsis thaliana Full-length cDNA Co... 38 9.8
31dbj|AB024029.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 38 9.8
32emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chro... 38 9.8
33emb|AL844164.17| Mouse DNA sequence from clone RP23-300I3 on chr... 38 9.8
34emb|AL731672.12| Mouse DNA sequence from clone RP23-161L11 on ch... 38 9.8

>gb|AY090547.1| Deschampsia antarctica clone Dacor 1.2 unknown mRNA, 3' UTR and
           partial cds
          Length = 753

 Score =  250 bits (126), Expect = 1e-63
 Identities = 180/198 (90%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtacaggaggttcacctccatgccattggaatctccccaacatcgatttaattccttccc 60
           ||||| ||||||||||||||||||||||| | |||||||||||| |||||||||||||| 
Sbjct: 395 gtacaagaggttcacctccatgccattggcacctccccaacatcaatttaattccttcca 336

                                                                       
Query: 61  agggggagtgaccggcatgagtatgtttccctgaaatcaaacttgttggaggaagtgaaa 120
           ||||||||||||| ||||||||| || ||| |||||||| |||||||||| |||||||||
Sbjct: 335 agggggagtgacctgcatgagtaggtctccttgaaatcagacttgttggacgaagtgaaa 276

                                                                       
Query: 121 attgatgcatacactttcttgtttgcatgagccggtgcatgatctgcaaccttaaaccgc 180
           || || |||||||||||||||||||||| ||||||||||||||| ||| |||| ||||||
Sbjct: 275 atcgacgcatacactttcttgtttgcataagccggtgcatgatccgcagccttgaaccgc 216

                             
Query: 181 tttgctggggcagcctcc 198
           || |||||||||||||||
Sbjct: 215 ttagctggggcagcctcc 198



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  109 bits (55), Expect = 3e-21
 Identities = 112/131 (85%)
 Strand = Plus / Plus

                                                                           
Query: 52      ttccttcccagggggagtgaccggcatgagtatgtttccctgaaatcaaacttgttggag 111
               |||||||| ||||| |||||||||||||||||||| ||| |||||||  |||| ||||| 
Sbjct: 4200234 ttccttccaaggggaagtgaccggcatgagtatgtctccttgaaatctgacttcttggaa 4200293

                                                                           
Query: 112     gaagtgaaaattgatgcatacactttcttgtttgcatgagccggtgcatgatctgcaacc 171
               ||||| ||||| |||||||||||||  ||||||||||  || |||||||| ||| || ||
Sbjct: 4200294 gaagtaaaaatcgatgcatacacttctttgtttgcatatgctggtgcatggtctccagcc 4200353

                          
Query: 172     ttaaaccgctt 182
               || ||||||||
Sbjct: 4200354 ttgaaccgctt 4200364



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>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0554A06
          Length = 165311

 Score =  109 bits (55), Expect = 3e-21
 Identities = 112/131 (85%)
 Strand = Plus / Plus

                                                                         
Query: 52    ttccttcccagggggagtgaccggcatgagtatgtttccctgaaatcaaacttgttggag 111
             |||||||| ||||| |||||||||||||||||||| ||| |||||||  |||| ||||| 
Sbjct: 45455 ttccttccaaggggaagtgaccggcatgagtatgtctccttgaaatctgacttcttggaa 45514

                                                                         
Query: 112   gaagtgaaaattgatgcatacactttcttgtttgcatgagccggtgcatgatctgcaacc 171
             ||||| ||||| |||||||||||||  ||||||||||  || |||||||| ||| || ||
Sbjct: 45515 gaagtaaaaatcgatgcatacacttctttgtttgcatatgctggtgcatggtctccagcc 45574

                        
Query: 172   ttaaaccgctt 182
             || ||||||||
Sbjct: 45575 ttgaaccgctt 45585



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>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBb0036B04
          Length = 136159

 Score =  109 bits (55), Expect = 3e-21
 Identities = 112/131 (85%)
 Strand = Plus / Plus

                                                                          
Query: 52     ttccttcccagggggagtgaccggcatgagtatgtttccctgaaatcaaacttgttggag 111
              |||||||| ||||| |||||||||||||||||||| ||| |||||||  |||| ||||| 
Sbjct: 133493 ttccttccaaggggaagtgaccggcatgagtatgtctccttgaaatctgacttcttggaa 133552

                                                                          
Query: 112    gaagtgaaaattgatgcatacactttcttgtttgcatgagccggtgcatgatctgcaacc 171
              ||||| ||||| |||||||||||||  ||||||||||  || |||||||| ||| || ||
Sbjct: 133553 gaagtaaaaatcgatgcatacacttctttgtttgcatatgctggtgcatggtctccagcc 133612

                         
Query: 172    ttaaaccgctt 182
              || ||||||||
Sbjct: 133613 ttgaaccgctt 133623



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>dbj|AK109370.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-D12, full
            insert sequence
          Length = 1403

 Score =  109 bits (55), Expect = 3e-21
 Identities = 112/131 (85%)
 Strand = Plus / Minus

                                                                        
Query: 52   ttccttcccagggggagtgaccggcatgagtatgtttccctgaaatcaaacttgttggag 111
            |||||||| ||||| |||||||||||||||||||| ||| |||||||  |||| ||||| 
Sbjct: 1147 ttccttccaaggggaagtgaccggcatgagtatgtctccttgaaatctgacttcttggaa 1088

                                                                        
Query: 112  gaagtgaaaattgatgcatacactttcttgtttgcatgagccggtgcatgatctgcaacc 171
            ||||| ||||| |||||||||||||  ||||||||||  || |||||||| ||| || ||
Sbjct: 1087 gaagtaaaaatcgatgcatacacttctttgtttgcatatgctggtgcatggtctccagcc 1028

                       
Query: 172  ttaaaccgctt 182
            || ||||||||
Sbjct: 1027 ttgaaccgctt 1017



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>dbj|AK102112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084G03, full
            insert sequence
          Length = 1473

 Score =  109 bits (55), Expect = 3e-21
 Identities = 112/131 (85%)
 Strand = Plus / Minus

                                                                        
Query: 52   ttccttcccagggggagtgaccggcatgagtatgtttccctgaaatcaaacttgttggag 111
            |||||||| ||||| |||||||||||||||||||| ||| |||||||  |||| ||||| 
Sbjct: 1142 ttccttccaaggggaagtgaccggcatgagtatgtctccttgaaatctgacttcttggaa 1083

                                                                        
Query: 112  gaagtgaaaattgatgcatacactttcttgtttgcatgagccggtgcatgatctgcaacc 171
            ||||| ||||| |||||||||||||  ||||||||||  || |||||||| ||| || ||
Sbjct: 1082 gaagtaaaaatcgatgcatacacttctttgtttgcatatgctggtgcatggtctccagcc 1023

                       
Query: 172  ttaaaccgctt 182
            || ||||||||
Sbjct: 1022 ttgaaccgctt 1012



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>gb|AC007866.11| Trypanosoma brucei chromosome 2 clone RPCI93-36E18, complete sequence
          Length = 110159

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 104   tgttggaggaagtgaaaattg 124
             |||||||||||||||||||||
Sbjct: 55007 tgttggaggaagtgaaaattg 55027



 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 104   tgttggaggaagtgaaaat 122
             |||||||||||||||||||
Sbjct: 76075 tgttggaggaagtgaaaat 76093



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>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 104     tgttggaggaagtgaaaattg 124
               |||||||||||||||||||||
Sbjct: 1138796 tgttggaggaagtgaaaattg 1138816



 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 104     tgttggaggaagtgaaaat 122
               |||||||||||||||||||
Sbjct: 1159864 tgttggaggaagtgaaaat 1159882



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>ref|XM_946659.1| Trypanosoma brucei TREU927 adenosine transporter 2 (Tb927.2.6240)
           partial mRNA
          Length = 1392

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 104 tgttggaggaagtgaaaattg 124
           |||||||||||||||||||||
Sbjct: 345 tgttggaggaagtgaaaattg 365



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>gb|AC115724.10| Mus musculus chromosome 3, clone RP23-20L18, complete sequence
          Length = 208154

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    atgcatacactttcttgttt 144
              ||||||||||||||||||||
Sbjct: 157142 atgcatacactttcttgttt 157161



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>gb|AC162717.3| Equus caballus clone CH241-248O22, complete sequence
          Length = 56228

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   gttggaggaagtgaaaattg 124
             ||||||||||||||||||||
Sbjct: 36926 gttggaggaagtgaaaattg 36907



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>gb|AC115740.8| Mus musculus chromosome 3, clone RP23-476G18, complete sequence
          Length = 226125

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   atgcatacactttcttgttt 144
             ||||||||||||||||||||
Sbjct: 31380 atgcatacactttcttgttt 31399



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>gb|DP000020.1| Equus caballus target 1 genomic scaffold
          Length = 1907055

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    gttggaggaagtgaaaattg 124
              ||||||||||||||||||||
Sbjct: 273316 gttggaggaagtgaaaattg 273297



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>ref|NM_125187.3| Arabidopsis thaliana unknown protein AT5G58020 mRNA, complete cds
          Length = 1319

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 46/55 (83%)
 Strand = Plus / Minus

                                                                   
Query: 50   aattccttcccagggggagtgaccggcatgagtatgtttccctgaaatcaaactt 104
            ||||||| || || || ||||||| ||| ||||| || |||||||||||| ||||
Sbjct: 1148 aattcctgccgagaggaagtgacctgcaagagtaagtctccctgaaatcagactt 1094



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>gb|AC160962.2| Mus musculus BAC clone RP24-308N16 from chromosome 13, complete sequence
          Length = 147866

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 91     ctgaaatcaaacttgttggagga 113
              |||||||||||||||| ||||||
Sbjct: 133666 ctgaaatcaaacttgtaggagga 133644



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>gb|AC123605.8| Mus musculus chromosome 5, clone RP24-176O2, complete sequence
          Length = 211657

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 50     aattccttcccagggggag 68
              |||||||||||||||||||
Sbjct: 125219 aattccttcccagggggag 125237



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>ref|XM_946663.1| Trypanosoma brucei TREU927 adenosine transporter 2 (Tb927.2.6320)
           partial mRNA
          Length = 1389

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 104 tgttggaggaagtgaaaat 122
           |||||||||||||||||||
Sbjct: 345 tgttggaggaagtgaaaat 363



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>emb|CR974572.21| Pig DNA sequence from clone CH242-200F24 on chromosome 17, complete
             sequence
          Length = 137431

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 52    ttccttcccagggggagtgaccg 74
             ||||| |||||||||||||||||
Sbjct: 76393 ttcctccccagggggagtgaccg 76415



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>gb|BT010560.1| Arabidopsis thaliana At5g58020 gene, complete cds
          Length = 1065

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 46/55 (83%)
 Strand = Plus / Minus

                                                                   
Query: 50   aattccttcccagggggagtgaccggcatgagtatgtttccctgaaatcaaactt 104
            ||||||| || || || ||||||| ||| ||||| || |||||||||||| ||||
Sbjct: 1063 aattcctgccgagaggaagtgacctgcaagagtaagtctccctgaaatcagactt 1009



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>gb|AC084859.7| Homo sapiens chromosome 11, clone CTC-497E21, complete sequence
          Length = 172345

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 12     tcacctccatgccattgga 30
              |||||||||||||||||||
Sbjct: 123062 tcacctccatgccattgga 123080



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>gb|AC134473.4| Mus musculus BAC clone RP23-190G18 from chromosome 3, complete sequence
          Length = 212795

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 120    aattgatgcatacactttcttgt 142
              ||||| |||||||||||||||||
Sbjct: 130185 aattggtgcatacactttcttgt 130207



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>gb|AC164439.4| Mus musculus BAC clone RP23-31B24 from chromosome 3, complete sequence
          Length = 206717

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 120    aattgatgcatacactttcttgt 142
              ||||| |||||||||||||||||
Sbjct: 192431 aattggtgcatacactttcttgt 192409



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>emb|CR936843.10| Mouse DNA sequence from clone RP23-270K2 on chromosome 4, complete
             sequence
          Length = 128921

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 109   gaggaagtgaaaattgatg 127
             |||||||||||||||||||
Sbjct: 14716 gaggaagtgaaaattgatg 14734



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>gb|AC104299.2| Homo sapiens chromosome 3 clone RP11-129K20, complete sequence
          Length = 181444

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 81     gtatgtttccctgaaatca 99
              |||||||||||||||||||
Sbjct: 109724 gtatgtttccctgaaatca 109742



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>gb|AY034579.1| Mus musculus cathepsin J (Ctsj) gene, complete cds
          Length = 19094

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 91    ctgaaatcaaacttgttggagga 113
             |||||||||||||||| ||||||
Sbjct: 17626 ctgaaatcaaacttgtaggagga 17648



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>gb|AC013762.6| Homo sapiens, clone RP11-2I1, complete sequence
          Length = 144048

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 12   tcacctccatgccattgga 30
            |||||||||||||||||||
Sbjct: 3116 tcacctccatgccattgga 3134



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>gb|AC022113.6| Homo sapiens chromosome 5 clone CTC-461F20, complete sequence
          Length = 188570

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 97    tcaaacttgttggaggaag 115
             |||||||||||||||||||
Sbjct: 59387 tcaaacttgttggaggaag 59369



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>gb|AC158242.4| Pan troglodytes BAC clone CH251-354C10 from chromosome unknown,
             complete sequence
          Length = 182200

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 97    tcaaacttgttggaggaag 115
             |||||||||||||||||||
Sbjct: 13168 tcaaacttgttggaggaag 13150



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>emb|BX829734.1|CNS0A018 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB31ZH12 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1223

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 46/55 (83%)
 Strand = Plus / Minus

                                                                   
Query: 50   aattccttcccagggggagtgaccggcatgagtatgtttccctgaaatcaaactt 104
            ||||||| || || || ||| ||| ||| ||||| ||||||||||||||| ||||
Sbjct: 1110 aattcctgccgagaggaagtcacctgcaagagtaagtttccctgaaatcagactt 1056



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>emb|BX831485.1|CNS09ZJ1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS9ZD08 of Adult vegetative tissue of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1293

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 46/55 (83%)
 Strand = Plus / Minus

                                                                   
Query: 50   aattccttcccagggggagtgaccggcatgagtatgtttccctgaaatcaaactt 104
            ||||||| || || || ||||||| ||| ||||| || |||||||||||| ||||
Sbjct: 1122 aattcctgccgagaggaagtgacctgcaagagtaagtctccctgaaatcagactt 1068



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>dbj|AB024029.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21L19
          Length = 41087

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 46/55 (83%)
 Strand = Plus / Minus

                                                                  
Query: 50  aattccttcccagggggagtgaccggcatgagtatgtttccctgaaatcaaactt 104
           ||||||| || || || ||||||| ||| ||||| || |||||||||||| ||||
Sbjct: 862 aattcctgccgagaggaagtgacctgcaagagtaagtctccctgaaatcagactt 808



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>emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chromosome 14, complete
              sequence
          Length = 218673

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 50     aattccttcccagggggag 68
              |||||||||||||||||||
Sbjct: 161489 aattccttcccagggggag 161471



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>emb|AL844164.17| Mouse DNA sequence from clone RP23-300I3 on chromosome 4, complete
              sequence
          Length = 209214

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 109    gaggaagtgaaaattgatg 127
              |||||||||||||||||||
Sbjct: 115436 gaggaagtgaaaattgatg 115454



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>emb|AL731672.12| Mouse DNA sequence from clone RP23-161L11 on chromosome X, complete
             sequence
          Length = 232171

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                            
Query: 101   acttgttggaggaagtgaaaattgatgcata 131
             |||||||||||||| || |||||||| ||||
Sbjct: 94665 acttgttggaggaaatgcaaattgatacata 94695


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,848,342
Number of Sequences: 3902068
Number of extensions: 1848342
Number of successful extensions: 132535
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 132408
Number of HSP's gapped (non-prelim): 127
length of query: 198
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 176
effective length of database: 17,147,199,772
effective search space: 3017907159872
effective search space used: 3017907159872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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