>gb|AY677177.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS1) mRNA, complete
            cds
          Length = 1433

 Score =  537 bits (271), Expect = e-150
 Identities = 291/295 (98%), Gaps = 2/295 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    acagccaggccttgtatataa-gtttctaa-aatacaatcattcaagtgaacgacaaagg 58
            ||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||
Sbjct: 1308 acagccaggccttgtatataaagtttctaataatacaatctttcaagtgaacgacaaagg 1249

                                                                        
Query: 59   tgtaattggtttattggaactcaaattccgtaacgaaacacagcaacgaatattgacgaa 118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1248 tgtaattggtttattggaactcaaattccgtaacgaaacacagcaacgaatattgacgaa 1189

                                                                        
Query: 119  cccacccaactatgagtatgctctggcaaattggtgatgtacgccaaacgcagggaagtg 178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1188 cccacccaactatgagtatgctctggcaaattggtgatgtacgccaaacgcagggaagtg 1129

                                                                        
Query: 179  gccttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgag 238
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1128 gccttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgag 1069

                                                                   
Query: 239  caccaagccgtcacgtaggacgaccttgggctcccagtcaagaaccttctttgcc 293
            ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1068 caccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcc 1014

>emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-glucose dehydratase (tgp gene)
          Length = 1562

 Score =  105 bits (53), Expect = 8e-20
 Identities = 83/93 (89%)
 Strand = Plus / Minus

                                                                        
Query: 182  ttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcac 241
            ||||||||| | || ||||||||| ||||  |||||||||||||| ||||||||||||||
Sbjct: 1291 ttaggccttagtctccttgggcacagccaggcgctcccggaagtcatcctccatgagcac 1232

                                             
Query: 242  caagccgtcacgtaggacgaccttgggctccca 274
            |||||||||||| || |||||||| ||||||||
Sbjct: 1231 caagccgtcacgcagaacgaccttaggctccca 1199



 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                        
Query: 30   aatacaatcattcaagtgaacgacaaaggtgtaattggtttattggaactcaaattccgt 89
            ||||||||| ||||| |||||||||| | |||| |  |||||||||||||||||||||||
Sbjct: 1418 aatacaatctttcaattgaacgacaacgatgtattcagtttattggaactcaaattccgt 1359

                   
Query: 90   aacgaaa 96
            || ||||
Sbjct: 1358 aatgaaa 1352

>gb|AY104952.1| Zea mays PCO092342 mRNA sequence
          Length = 1825

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 81/93 (87%)
 Strand = Plus / Minus

                                                                        
Query: 182  ttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcac 241
            |||||||||||  ||||||||||| ||||  ||||||||||| || ||||||||||||||
Sbjct: 1535 ttaggccttggttttcttgggcacggccaggcgctcccggaaatcatcctccatgagcac 1476

                                             
Query: 242  caagccgtcacgtaggacgaccttgggctccca 274
            |||||||||    ||||||| ||||||||||||
Sbjct: 1475 caagccgtccttcaggacgatcttgggctccca 1443



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 67   gtttattggaactcaaattccgtaacgaaa 96
            ||||||||||||||||||||||||| ||||
Sbjct: 1639 gtttattggaactcaaattccgtaatgaaa 1610

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                           
Query: 181     cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 240
               ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 9412292 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 9412233

                                                 
Query: 241     ccaagccgtcacgtaggacgaccttgggctccca 274
               ||||||| ||||| || |||| ||||||||||||
Sbjct: 9412232 ccaagccatcacgcagaacgatcttgggctccca 9412199

>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                          
Query: 181    cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 240
              ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 109692 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 109633

                                                
Query: 241    ccaagccgtcacgtaggacgaccttgggctccca 274
              ||||||| ||||| || |||| ||||||||||||
Sbjct: 109632 ccaagccatcacgcagaacgatcttgggctccca 109599

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                           
Query: 181     cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 240
               ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 9410413 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 9410354

                                                 
Query: 241     ccaagccgtcacgtaggacgaccttgggctccca 274
               ||||||| ||||| || |||| ||||||||||||
Sbjct: 9410353 ccaagccatcacgcagaacgatcttgggctccca 9410320

>dbj|AB079064.1| Oryza sativa (japonica cultivar-group) UXS-3 mRNA for UDP-glucuronic
            acid decarboxylase, complete cds
          Length = 1053

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                        
Query: 213  cgctcccggaagtcgtcctccatgagcaccaagccgtcacgtaggacgaccttgggctcc 272
            ||||||||||| || || ||||||||||||||||| ||||| || |||| ||||||||||
Sbjct: 1022 cgctcccggaaatcatcttccatgagcaccaagccatcacgcagaacgatcttgggctcc 963

              
Query: 273  ca 274
            ||
Sbjct: 962  ca 961

>dbj|AK100908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132F05, full
            insert sequence
          Length = 1811

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                        
Query: 181  cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 240
            ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 1542 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 1483

                                              
Query: 241  ccaagccgtcacgtaggacgaccttgggctccca 274
            ||||||| ||||| || |||| ||||||||||||
Sbjct: 1482 ccaagccatcacgcagaacgatcttgggctccca 1449

>dbj|AK060031.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H02, full
            insert sequence
          Length = 1411

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                        
Query: 181  cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 240
            ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 1153 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 1094

                                              
Query: 241  ccaagccgtcacgtaggacgaccttgggctccca 274
            ||||||| ||||| || |||| ||||||||||||
Sbjct: 1093 ccaagccatcacgcagaacgatcttgggctccca 1060

>dbj|AK061632.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-A03, full
           insert sequence
          Length = 472

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 78/94 (82%)
 Strand = Plus / Minus

                                                                       
Query: 181 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 240
           ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 207 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 148

                                             
Query: 241 ccaagccgtcacgtaggacgaccttgggctccca 274
           ||||||| ||||| || |||| | ||||||||||
Sbjct: 147 ccaagccatcacgcagaacgatcctgggctccca 114

>gb|BT019083.1| Zea mays clone Contig672.F mRNA sequence
          Length = 958

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                       
Query: 214 gctcccggaagtcgtcctccatgagcaccaagccgtcacgtaggacgaccttgggctccc 273
           |||||||||| || ||||||||||||||||||||||| |  |||| ||  ||||||||||
Sbjct: 787 gctcccggaaatcatcctccatgagcaccaagccgtcccccaggaagattttgggctccc 728

            
Query: 274 a 274
           |
Sbjct: 727 a 727



 Score = 42.1 bits (21), Expect = 0.97
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 72  ttggaactcaaattccgtaacgaaa 96
           |||||||||||||||||||| ||||
Sbjct: 921 ttggaactcaaattccgtaatgaaa 897

>gb|AC103967.4| Homo sapiens chromosome 15, clone CTD-3221M10, complete sequence
          Length = 201545

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 24  ttctaaaatacaatcattcaa 44
           |||||||||||||||||||||
Sbjct: 931 ttctaaaatacaatcattcaa 951

>gb|AC013526.7| Homo sapiens, clone RP11-114I24, complete sequence
          Length = 156895

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 24    ttctaaaatacaatcattcaa 44
             |||||||||||||||||||||
Sbjct: 85770 ttctaaaatacaatcattcaa 85790

>gb|AY501937.1| Campylobacter jejuni strain TGH 9011 contig054 Tgh048 gene, partial
           cds
          Length = 1058

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 16  atataagtttctaaaatacaa 36
           |||||||||||||||||||||
Sbjct: 912 atataagtttctaaaatacaa 932

>gb|AC022692.11| Homo sapiens chromosome 15, clone RP11-530L17, complete sequence
          Length = 173604

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 24    ttctaaaatacaatcattcaa 44
             |||||||||||||||||||||
Sbjct: 35819 ttctaaaatacaatcattcaa 35799

>emb|CR378665.1| Photobacterium profundum SS9; segment 3/12
          Length = 347213

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     gtttctaaaatacaatcatt 41
              ||||||||||||||||||||
Sbjct: 341448 gtttctaaaatacaatcatt 341429

>gb|AC159135.11| Mus musculus 10 BAC RP23-184H24 (Roswell Park Cancer Institute
           (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 207228

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 51  gacaaaggtgtaattggttt 70
           ||||||||||||||||||||
Sbjct: 337 gacaaaggtgtaattggttt 318

>gb|AC099760.5| Mus musculus BAC clone RP23-122E16 from chromosome 8, complete sequence
          Length = 193884

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    ttggccttcttgggcactgc 208
              ||||||||||||||||||||
Sbjct: 153079 ttggccttcttgggcactgc 153098

>gb|AC159335.10| Mus musculus 10 BAC RP24-447O4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 135177

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    gacaaaggtgtaattggttt 70
             ||||||||||||||||||||
Sbjct: 76946 gacaaaggtgtaattggttt 76927

>gb|AC034213.5|AC034213 Homo sapiens chromosome 5 clone CTC-573N18, complete sequence
          Length = 150179

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 18     ataagtttctaaaatacaatcatt 41
              ||||||| ||||||||||||||||
Sbjct: 132597 ataagttactaaaatacaatcatt 132574

>gb|AC122714.2| Homo sapiens chromosome 5 clone RP11-451H23, complete sequence
          Length = 190024

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 18    ataagtttctaaaatacaatcatt 41
             ||||||| ||||||||||||||||
Sbjct: 19009 ataagttactaaaatacaatcatt 18986

>gb|AY108129.1| Zea mays PCO069672 mRNA sequence
          Length = 984

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 ttgggctcccagtcaagaac 283
           ||||||||||||||||||||
Sbjct: 623 ttgggctcccagtcaagaac 604

>emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on chromosome 17, complete
              sequence
          Length = 231197

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    tatgagtatgctctggcaaa 148
              ||||||||||||||||||||
Sbjct: 208325 tatgagtatgctctggcaaa 208306

>emb|AL929024.9| Mouse DNA sequence from clone RP23-480H10 on chromosome 2, complete
             sequence
          Length = 159617

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   ttggccttcttgggcactgc 208
             ||||||||||||||||||||
Sbjct: 53068 ttggccttcttgggcactgc 53049


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,125,755
Number of Sequences: 3902068
Number of extensions: 2125755
Number of successful extensions: 42265
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42183
Number of HSP's gapped (non-prelim): 80
length of query: 293
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 271
effective length of database: 17,147,199,772
effective search space: 4646891138212
effective search space used: 4646891138212
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)