>SYV_NEIMA (Q9JX22) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 945

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
 Frame = -1

Query: 205 AMRTFLLMLYCFLLSAFFSEKLCNNYAIL*KV*TQS-CA---RA*R*TLLRVI*LNVLLM 38
           A  T+   L    L +F     C+ Y  L KV  Q+ CA   RA R TLLRV+   + L+
Sbjct: 692 AYETYRFDLAAETLYSFMWNDYCDWYLELAKVQLQTGCASRQRATRHTLLRVLEAALRLL 751

Query: 37  HIVADYDTKSCW 2
           H +  + T+  W
Sbjct: 752 HPIIPFITEELW 763

>SYV_NEIMB (Q9K1H7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 945

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
 Frame = -1

Query: 205 AMRTFLLMLYCFLLSAFFSEKLCNNYAIL*KV*TQS-CA---RA*R*TLLRVI*LNVLLM 38
           A  T+   L    L +F     C+ Y  L KV  Q+ CA   RA R TLLRV+   + L+
Sbjct: 692 AYETYRFDLAAETLYSFVWNDYCDWYLELAKVQLQTGCASRQRATRHTLLRVLEAALRLL 751

Query: 37  HIVADYDTKSCW 2
           H +  + T+  W
Sbjct: 752 HPIIPFITEELW 763

>SYV_NEIG1 (Q5F5W0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 945

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
 Frame = -1

Query: 205 AMRTFLLMLYCFLLSAFFSEKLCNNYAIL*KV*TQS-CA---RA*R*TLLRVI*LNVLLM 38
           A  T+   L    L +F     C+ Y  L KV  Q+ CA   RA R TLLRV+   + L+
Sbjct: 692 AYETYRFDLAAETLYSFVWNDYCDWYLELAKVQLQTGCASRQRATRHTLLRVLEAALRLL 751

Query: 37  HIVADYDTKSCW 2
           H +  + T+  W
Sbjct: 752 HPIIPFITEELW 763

>RHOF_MOUSE (Q8BYP3) Rho-related GTP-binding protein RhoF|
          Length = 211

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -2

Query: 216 VAEGRCGLSSLCCIVFFCQPSFPKNFA 136
           V +G CG +SL  ++ +CQ SFP+++A
Sbjct: 25  VGDGGCGKTSL--LMVYCQGSFPEHYA 49

>RAB34_MOUSE (Q64008) Ras-related protein Rab-34 (Rab-39) (Ras-related protein|
           Rah) (Ras-related homolog)
          Length = 259

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
 Frame = -2

Query: 297 LRQAMAVNLAR*FH---------FRAKEIALKLNFAVAEGRCGLSSLCCIVFFCQPSFPK 145
           L++  A+++ + FH          R   +  K++  +  G   +   C I  FC+ +F K
Sbjct: 20  LKKEAALHVRKDFHPRVTCACQEHRTGTVGFKISKVIVVGDLSVGKTCLINRFCKDTFDK 79

Query: 144 NFAITM 127
           N+  T+
Sbjct: 80  NYKATI 85


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,272,341
Number of Sequences: 219361
Number of extensions: 929759
Number of successful extensions: 2735
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2735
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)