ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet22a07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463959.1| Oryza sativa (japonica cultivar-group), mRNA 218 1e-53
2ref|XM_506700.1| PREDICTED Oryza sativa (japonica cultivar-group... 218 1e-53
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 218 1e-53
4dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic D... 218 1e-53
5dbj|AK101502.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
6dbj|AK071006.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
7gb|BT014286.1| Lycopersicon esculentum clone 133525F, mRNA sequence 60 6e-06
8ref|NM_124082.3| Arabidopsis thaliana unknown protein AT5G47110 ... 56 1e-04
9ref|NM_117868.3| Arabidopsis thaliana LIL3:1; transcription fact... 56 1e-04
10gb|BT012619.1| Arabidopsis thaliana At5g47110 gene, complete cds 56 1e-04
11gb|BT010859.1| Arabidopsis thaliana At5g47110 mRNA, complete cds 56 1e-04
12gb|BT000425.1| Arabidopsis thaliana Lil3 protein (AT4g17600) mRN... 56 1e-04
13emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA ... 56 1e-04
14gb|BT000402.1| Arabidopsis thaliana Lil3 protein (At4g17600) mRN... 56 1e-04
15emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, ... 56 1e-04
16gb|AY136323.1| Arabidopsis thaliana Lil3 protein (At4g17600) mRN... 56 1e-04
17gb|AC183495.1| Brassica oleracea Contig A, complete sequence 56 1e-04
18gb|AF375427.1| Arabidopsis thaliana AT4g17600/dl4835w mRNA, comp... 56 1e-04
19gb|AY074821.1| Arabidopsis thaliana AT4g17600/dl4835w gene, comp... 56 1e-04
20emb|BX829505.1|CNS0A1C0 Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
21gb|AF134133.1| Arabidopsis thaliana chromosome IV Lil3 protein (... 56 1e-04
22dbj|AB025609.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 56 1e-04
23gb|BT002185.1| Arabidopsis thaliana Lil3 protein (AT4g17600) mRN... 56 1e-04
24gb|AY086891.1| Arabidopsis thaliana clone 29150 mRNA, complete s... 50 0.006
25gb|AC183493.1| Brassica oleracea Contig B, complete sequence 48 0.023
26emb|BX829203.1|CNS0A2LJ Arabidopsis thaliana Full-length cDNA Co... 48 0.023
27emb|AJ538715.1|NTA538715 Nicotiana tabacum cDNA-AFLP-fragment BC... 48 0.023
28gb|AC027315.3|AC027315 Homo sapiens chromosome 5 clone CTC-293G1... 44 0.36
29gb|AC021086.4|AC021086 Homo sapiens chromosome 5 clone CTD-2001C... 44 0.36
30gb|AC010382.4|AC010382 Homo sapiens chromosome 5 clone CTD-2068C... 44 0.36
31gb|AY558717.1| Neobalanocarpus heimii clone Nhe115 microsatellit... 44 0.36
32ref|NM_192088.1| Oryza sativa (japonica cultivar-group), predic... 42 1.4
33gb|AC112523.5| Mus musculus BAC clone RP23-418K6 from chromosome... 42 1.4
34emb|AL136439.19| Human DNA sequence from clone RP11-87C7 on chro... 42 1.4
35gb|AC090136.6| Homo sapiens chromosome 8, clone RP11-21C4, compl... 42 1.4
36emb|BX640507.8| Zebrafish DNA sequence from clone DKEY-97O1 in l... 42 1.4
37dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
38gb|AC158234.2| Mus musculus BAC clone RP23-149C23 from chromosom... 42 1.4
39gb|AF215845.3| Homo sapiens chromosome 8 clone CTD-2542N7 map q1... 42 1.4
40dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
41emb|BX571830.6| Zebrafish DNA sequence from clone DKEY-261I16 in... 42 1.4
42gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 42 1.4
43gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome 40 5.6
44gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome 40 5.6
45emb|CR974467.8| Pig DNA sequence from clone CH242-235B3 on chrom... 40 5.6
46emb|CR974458.2| Pig DNA sequence from clone CH242-29M17 on chrom... 40 5.6
47emb|AJ567372.1|HVU567372 Hordeum vulgare mRNA for putative 3-bet... 40 5.6
48emb|AL139345.7| Human DNA sequence from clone RP5-832K2 on chrom... 40 5.6
49emb|BX571861.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 40 5.6
50gb|AY855841.2| Enterococcus faecalis plasmid pCF10, complete seq... 40 5.6
51emb|BX649211.10| Zebrafish DNA sequence from clone DKEY-215O18 i... 40 5.6
52gb|DP000058.1| Felis catus target 117 genomic scaffold 40 5.6
53ref|NM_132773.2| Drosophila melanogaster rab3-GEF CG5627-RA (rab... 40 5.6
54gb|DQ159622.1| Uncultured bacterium clone hbD_8B putative dissim... 40 5.6
55gb|AC025775.6| Homo sapiens chromosome 5 clone CTD-2299B9, compl... 40 5.6
56emb|BX005331.8| Zebrafish DNA sequence from clone CH211-66K16 in... 40 5.6
57gb|AC022345.2|AC022345 Drosophila melanogaster, chromosome X, re... 40 5.6
58gb|AC018488.7|AC018488 Drosophila melanogaster, chromosome X, re... 40 5.6
59gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 ... 40 5.6
60gb|AE016831.1| Enterococcus faecalis V583 plasmid pTEF2, complet... 40 5.6 
>ref|XM_463959.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1015

 Score =  218 bits (110), Expect = 1e-53
 Identities = 173/194 (89%)
 Strand = Plus / Minus

                                                                       
Query: 223 attcaacttcagagctatttctttggcccggaagtggaatcatcttgccaagttgactgc 282
           |||| |||||||||||||||||| |||   |||| ||| ||||||||||| |||| ||||
Sbjct: 839 attccacttcagagctatttcttgggctgagaaggggactcatcttgccaggttgcctgc 780

                                                                       
Query: 283 cattgcttgtcgtagaacgttgactcatcgatgagcttcttcagattgtcgatgtcctcg 342
           |||||||||||||||||||| | ||||||||||||||||||||   | || |||||||||
Sbjct: 779 cattgcttgtcgtagaacgtcgtctcatcgatgagcttcttcactgtctctatgtcctcg 720

                                                                       
Query: 343 tttttcctgactagcagcaccccagccacagcaacaaacagcagggttttgcagaagaaa 402
           ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| 
Sbjct: 719 tttttcctgaccagcagcacaccagccacagcaacaaacagtagggttttgcagaagaag 660

                         
Query: 403 ttgcccatttggtc 416
           |||||||| |||||
Sbjct: 659 ttgcccatctggtc 646
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>ref|XM_506700.1| PREDICTED Oryza sativa (japonica cultivar-group), P0482F12.6 mRNA
          Length = 1096

 Score =  218 bits (110), Expect = 1e-53
 Identities = 173/194 (89%)
 Strand = Plus / Minus

                                                                       
Query: 223 attcaacttcagagctatttctttggcccggaagtggaatcatcttgccaagttgactgc 282
           |||| |||||||||||||||||| |||   |||| ||| ||||||||||| |||| ||||
Sbjct: 839 attccacttcagagctatttcttgggctgagaaggggactcatcttgccaggttgcctgc 780

                                                                       
Query: 283 cattgcttgtcgtagaacgttgactcatcgatgagcttcttcagattgtcgatgtcctcg 342
           |||||||||||||||||||| | ||||||||||||||||||||   | || |||||||||
Sbjct: 779 cattgcttgtcgtagaacgtcgtctcatcgatgagcttcttcactgtctctatgtcctcg 720

                                                                       
Query: 343 tttttcctgactagcagcaccccagccacagcaacaaacagcagggttttgcagaagaaa 402
           ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| 
Sbjct: 719 tttttcctgaccagcagcacaccagccacagcaacaaacagtagggttttgcagaagaag 660

                         
Query: 403 ttgcccatttggtc 416
           |||||||| |||||
Sbjct: 659 ttgcccatctggtc 646
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  218 bits (110), Expect = 1e-53
 Identities = 173/194 (89%)
 Strand = Plus / Minus

                                                                           
Query: 223     attcaacttcagagctatttctttggcccggaagtggaatcatcttgccaagttgactgc 282
               |||| |||||||||||||||||| |||   |||| ||| ||||||||||| |||| ||||
Sbjct: 1346766 attccacttcagagctatttcttgggctgagaaggggactcatcttgccaggttgcctgc 1346707

                                                                           
Query: 283     cattgcttgtcgtagaacgttgactcatcgatgagcttcttcagattgtcgatgtcctcg 342
               |||||||||||||||||||| | ||||||||||||||||||||   | || |||||||||
Sbjct: 1346706 cattgcttgtcgtagaacgtcgtctcatcgatgagcttcttcactgtctctatgtcctcg 1346647

                                                                           
Query: 343     tttttcctgactagcagcaccccagccacagcaacaaacagcagggttttgcagaagaaa 402
               ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| 
Sbjct: 1346646 tttttcctgaccagcagcacaccagccacagcaacaaacagtagggttttgcagaagaag 1346587

                             
Query: 403     ttgcccatttggtc 416
               |||||||| |||||
Sbjct: 1346586 ttgcccatctggtc 1346573
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>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0482F12
          Length = 147735

 Score =  218 bits (110), Expect = 1e-53
 Identities = 173/194 (89%)
 Strand = Plus / Minus

                                                                         
Query: 223   attcaacttcagagctatttctttggcccggaagtggaatcatcttgccaagttgactgc 282
             |||| |||||||||||||||||| |||   |||| ||| ||||||||||| |||| ||||
Sbjct: 28038 attccacttcagagctatttcttgggctgagaaggggactcatcttgccaggttgcctgc 27979

                                                                         
Query: 283   cattgcttgtcgtagaacgttgactcatcgatgagcttcttcagattgtcgatgtcctcg 342
             |||||||||||||||||||| | ||||||||||||||||||||   | || |||||||||
Sbjct: 27978 cattgcttgtcgtagaacgtcgtctcatcgatgagcttcttcactgtctctatgtcctcg 27919

                                                                         
Query: 343   tttttcctgactagcagcaccccagccacagcaacaaacagcagggttttgcagaagaaa 402
             ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| 
Sbjct: 27918 tttttcctgaccagcagcacaccagccacagcaacaaacagtagggttttgcagaagaag 27859

                           
Query: 403   ttgcccatttggtc 416
             |||||||| |||||
Sbjct: 27858 ttgcccatctggtc 27845
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>dbj|AK101502.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044E02, full
           insert sequence
          Length = 1014

 Score =  218 bits (110), Expect = 1e-53
 Identities = 173/194 (89%)
 Strand = Plus / Minus

                                                                       
Query: 223 attcaacttcagagctatttctttggcccggaagtggaatcatcttgccaagttgactgc 282
           |||| |||||||||||||||||| |||   |||| ||| ||||||||||| |||| ||||
Sbjct: 838 attccacttcagagctatttcttgggctgagaaggggactcatcttgccaggttgcctgc 779

                                                                       
Query: 283 cattgcttgtcgtagaacgttgactcatcgatgagcttcttcagattgtcgatgtcctcg 342
           |||||||||||||||||||| | ||||||||||||||||||||   | || |||||||||
Sbjct: 778 cattgcttgtcgtagaacgtcgtctcatcgatgagcttcttcactgtctctatgtcctcg 719

                                                                       
Query: 343 tttttcctgactagcagcaccccagccacagcaacaaacagcagggttttgcagaagaaa 402
           ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| 
Sbjct: 718 tttttcctgaccagcagcacaccagccacagcaacaaacagtagggttttgcagaagaag 659

                         
Query: 403 ttgcccatttggtc 416
           |||||||| |||||
Sbjct: 658 ttgcccatctggtc 645
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>dbj|AK071006.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078I12, full
           insert sequence
          Length = 1096

 Score =  218 bits (110), Expect = 1e-53
 Identities = 173/194 (89%)
 Strand = Plus / Minus

                                                                       
Query: 223 attcaacttcagagctatttctttggcccggaagtggaatcatcttgccaagttgactgc 282
           |||| |||||||||||||||||| |||   |||| ||| ||||||||||| |||| ||||
Sbjct: 839 attccacttcagagctatttcttgggctgagaaggggactcatcttgccaggttgcctgc 780

                                                                       
Query: 283 cattgcttgtcgtagaacgttgactcatcgatgagcttcttcagattgtcgatgtcctcg 342
           |||||||||||||||||||| | ||||||||||||||||||||   | || |||||||||
Sbjct: 779 cattgcttgtcgtagaacgtcgtctcatcgatgagcttcttcactgtctctatgtcctcg 720

                                                                       
Query: 343 tttttcctgactagcagcaccccagccacagcaacaaacagcagggttttgcagaagaaa 402
           ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| 
Sbjct: 719 tttttcctgaccagcagcacaccagccacagcaacaaacagtagggttttgcagaagaag 660

                         
Query: 403 ttgcccatttggtc 416
           |||||||| |||||
Sbjct: 659 ttgcccatctggtc 646
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>gb|BT014286.1| Lycopersicon esculentum clone 133525F, mRNA sequence
          Length = 1142

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                       
Query: 358 agcaccccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtca 417
           ||||| || |||||||| ||||||| ||| |||||||| ||||| || ||||||||||||
Sbjct: 776 agcacaccggccacagctacaaacaacagtgttttgcaaaagaagttccccatttggtca 717

             
Query: 418 ac 419
           ||
Sbjct: 716 ac 715
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>ref|NM_124082.3| Arabidopsis thaliana unknown protein AT5G47110 mRNA, complete cds
          Length = 1086

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 364 ccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtcaac 419
           ||||| ||||| |||||||  || ||||||||||||||||| |||||||| |||||
Sbjct: 723 ccagctacagccacaaacaagagtgttttgcagaagaaatttcccatttgatcaac 668
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>ref|NM_117868.3| Arabidopsis thaliana LIL3:1; transcription factor AT4G17600
           (LIL3:1) mRNA, complete cds
          Length = 971

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 364 ccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtcaac 419
           ||||||||||| |||||||  || || |||||||||||||| |||||||| |||||
Sbjct: 707 ccagccacagccacaaacaatagtgtcttgcagaagaaattccccatttgatcaac 652
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>gb|BT012619.1| Arabidopsis thaliana At5g47110 gene, complete cds
          Length = 777

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 364 ccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtcaac 419
           ||||| ||||| |||||||  || ||||||||||||||||| |||||||| |||||
Sbjct: 644 ccagctacagccacaaacaagagtgttttgcagaagaaatttcccatttgatcaac 589
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>gb|BT010859.1| Arabidopsis thaliana At5g47110 mRNA, complete cds
          Length = 1000

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 364 ccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtcaac 419
           ||||| ||||| |||||||  || ||||||||||||||||| |||||||| |||||
Sbjct: 675 ccagctacagccacaaacaagagtgttttgcagaagaaatttcccatttgatcaac 620
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>gb|BT000425.1| Arabidopsis thaliana Lil3 protein (AT4g17600) mRNA, complete cds
          Length = 923

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 364 ccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtcaac 419
           ||||||||||| |||||||  || || |||||||||||||| |||||||| |||||
Sbjct: 706 ccagccacagccacaaacaatagtgtcttgcagaagaaattccccatttgatcaac 651
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>emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8
          Length = 207674

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                      
Query: 364    ccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtcaac 419
              ||||||||||| |||||||  || || |||||||||||||| |||||||| |||||
Sbjct: 169350 ccagccacagccacaaacaatagtgtcttgcagaagaaattccccatttgatcaac 169295
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>gb|BT000402.1| Arabidopsis thaliana Lil3 protein (At4g17600) mRNA, complete cds
          Length = 851

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 364 ccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtcaac 419
           ||||||||||| |||||||  || || |||||||||||||| |||||||| |||||
Sbjct: 653 ccagccacagccacaaacaatagtgtcttgcagaagaaattccccatttgatcaac 598
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>emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 46
          Length = 198788

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                      
Query: 364    ccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtcaac 419
              ||||||||||| |||||||  || || |||||||||||||| |||||||| |||||
Sbjct: 158715 ccagccacagccacaaacaatagtgtcttgcagaagaaattccccatttgatcaac 158660
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>gb|AY136323.1| Arabidopsis thaliana Lil3 protein (At4g17600) mRNA, complete cds
          Length = 923

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 364 ccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtcaac 419
           ||||||||||| |||||||  || || |||||||||||||| |||||||| |||||
Sbjct: 706 ccagccacagccacaaacaatagtgtcttgcagaagaaattccccatttgatcaac 651
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>gb|AC183495.1| Brassica oleracea Contig A, complete sequence
          Length = 356505

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                      
Query: 364    ccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtcaac 419
              ||||| ||||| |||||||  || ||||||||||||||||| |||||||| |||||
Sbjct: 271232 ccagctacagccacaaacaagagtgttttgcagaagaaattacccatttgatcaac 271177
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>gb|AF375427.1| Arabidopsis thaliana AT4g17600/dl4835w mRNA, complete cds
          Length = 931

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 364 ccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtcaac 419
           ||||||||||| |||||||  || || |||||||||||||| |||||||| |||||
Sbjct: 686 ccagccacagccacaaacaatagtgtcttgcagaagaaattccccatttgatcaac 631
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>gb|AY074821.1| Arabidopsis thaliana AT4g17600/dl4835w gene, complete cds
          Length = 789

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 364 ccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtcaac 419
           ||||||||||| |||||||  || || |||||||||||||| |||||||| |||||
Sbjct: 653 ccagccacagccacaaacaatagtgtcttgcagaagaaattccccatttgatcaac 598
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>emb|BX829505.1|CNS0A1C0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB18ZB11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1076

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 364 ccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtcaac 419
           ||||| ||||| |||||||  || ||||||||||||||||| |||||||| |||||
Sbjct: 723 ccagctacagccacaaacaagagtgttttgcagaagaaatttcccatttgatcaac 668
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>gb|AF134133.1| Arabidopsis thaliana chromosome IV Lil3 protein (Lil3:1) mRNA,
           complete cds
          Length = 937

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 364 ccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtcaac 419
           ||||||||||| |||||||  || || |||||||||||||| |||||||| |||||
Sbjct: 658 ccagccacagccacaaacaatagtgtcttgcagaagaaattccccatttgatcaac 603
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>dbj|AB025609.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K14A3
          Length = 34498

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                     
Query: 364   ccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtcaac 419
             ||||| ||||| |||||||  || ||||||||||||||||| |||||||| |||||
Sbjct: 17191 ccagctacagccacaaacaagagtgttttgcagaagaaatttcccatttgatcaac 17246
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>gb|BT002185.1| Arabidopsis thaliana Lil3 protein (AT4g17600) mRNA, complete cds
          Length = 850

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 364 ccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtcaac 419
           ||||||||||| |||||||  || || |||||||||||||| |||||||| |||||
Sbjct: 653 ccagccacagccacaaacaatagtgtcttgcagaagaaattccccatttgatcaac 598
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>gb|AY086891.1| Arabidopsis thaliana clone 29150 mRNA, complete sequence
          Length = 913

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 367 gccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtcaac 419
           |||||||| |||||||  || || |||||||||||||| |||||||| |||||
Sbjct: 669 gccacagccacaaacaatagtgtcttgcagaagaaattccccatttgatcaac 617
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>gb|AC183493.1| Brassica oleracea Contig B, complete sequence
          Length = 284024

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                      
Query: 364    ccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtcaac 419
              ||||| ||||| |||||||  || |||||||||||||| || |||||||| |||||
Sbjct: 260599 ccagctacagccacaaacaagagcgttttgcagaagaagtttcccatttgatcaac 260544
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>emb|BX829203.1|CNS0A2LJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL80ZF01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 474

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 364 ccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttggtcaac 419
           ||||| ||||| |||||||  || || |||||||||||||| |||||||| |||||
Sbjct: 207 ccagcaacagccacaaacaatagtgtcttgcagaagaaattccccatttgatcaac 152
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>emb|AJ538715.1|NTA538715 Nicotiana tabacum cDNA-AFLP-fragment BC4-M34-002
          Length = 467

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 358 agcaccccagccacagcaacaaacagcagggttttgcagaagaaattgcccatttg 413
           ||||| ||||||||||| | |||||  || |||||||| ||||| |||||||||||
Sbjct: 327 agcacaccagccacagctataaacaatagtgttttgcaaaagaagttgcccatttg 272
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>gb|AC027315.3|AC027315 Homo sapiens chromosome 5 clone CTC-293G12, complete sequence
          Length = 171390

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 129    tagttattgcaaagtttttcggaaaa 154
              |||||||||||||||||||| |||||
Sbjct: 145254 tagttattgcaaagtttttctgaaaa 145229
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>gb|AC021086.4|AC021086 Homo sapiens chromosome 5 clone CTD-2001C12, complete sequence
          Length = 137063

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 129   tagttattgcaaagtttttcggaaaa 154
             |||||||||||||||||||| |||||
Sbjct: 59635 tagttattgcaaagtttttctgaaaa 59610
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>gb|AC010382.4|AC010382 Homo sapiens chromosome 5 clone CTD-2068C11, complete sequence
          Length = 151365

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 129   tagttattgcaaagtttttcggaaaa 154
             |||||||||||||||||||| |||||
Sbjct: 93242 tagttattgcaaagtttttctgaaaa 93217
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>gb|AY558717.1| Neobalanocarpus heimii clone Nhe115 microsatellite sequence
          Length = 399

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                       
Query: 261 atcatcttgccaagttgactgccattgcttgtcgtagaacgttgactcatcgatgagctt 320
           |||||| ||||| ||||  ||||||||||||||||| || || | ||| || || |||||
Sbjct: 85  atcatcctgccaggttgcttgccattgcttgtcgtaaaaggtagtctcttcaatcagctt 26

                                 
Query: 321 cttcagattgtcgatgtcctcg 342
           ||| || || || |||||||||
Sbjct: 25  cttaaggttttctatgtcctcg 4
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>ref|NM_192088.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 4260

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 316  agcttcttcagattgtcgatg 336
            |||||||||||||||||||||
Sbjct: 1967 agcttcttcagattgtcgatg 1987
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>gb|AC112523.5| Mus musculus BAC clone RP23-418K6 from chromosome 16, complete sequence
          Length = 186848

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 163    acaaaagaaaacaatacaaca 183
              |||||||||||||||||||||
Sbjct: 118972 acaaaagaaaacaatacaaca 118992
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>emb|AL136439.19| Human DNA sequence from clone RP11-87C7 on chromosome 13q21.2-22.1
             Contains the gene for RNA polymerase I 16 kDa subunit
             (LOC51082), a nucleophosmin (nucleolar phosphoprotein B23,
             numatrin) (Nucleophosmin 1 (nucleolar phosphoprotein B23,
             numatrin)) (NPM1) pseudogene and a CpG island, complete
             sequence
          Length = 112204

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 163   acaaaagaaaacaatacaacataag 187
             ||||||||||||| |||||||||||
Sbjct: 38395 acaaaagaaaacattacaacataag 38371
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>gb|AC090136.6| Homo sapiens chromosome 8, clone RP11-21C4, complete sequence
          Length = 186304

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 149   ggaaaagaaggctgacaaaagaaaa 173
             ||||| |||||||||||||||||||
Sbjct: 62456 ggaaaggaaggctgacaaaagaaaa 62432
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>emb|BX640507.8| Zebrafish DNA sequence from clone DKEY-97O1 in linkage group 14, complete
              sequence
          Length = 189019

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 367    gccacagcaacaaacagcagg 387
              |||||||||||||||||||||
Sbjct: 104084 gccacagcaacaaacagcagg 104104
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 316      agcttcttcagattgtcgatg 336
                |||||||||||||||||||||
Sbjct: 28264359 agcttcttcagattgtcgatg 28264339
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>gb|AC158234.2| Mus musculus BAC clone RP23-149C23 from chromosome 16, complete
             sequence
          Length = 227632

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 163   acaaaagaaaacaatacaaca 183
             |||||||||||||||||||||
Sbjct: 67878 acaaaagaaaacaatacaaca 67858
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>gb|AF215845.3| Homo sapiens chromosome 8 clone CTD-2542N7 map q11-q13, complete sequence
          Length = 237705

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 149    ggaaaagaaggctgacaaaagaaaa 173
              ||||| |||||||||||||||||||
Sbjct: 102374 ggaaaggaaggctgacaaaagaaaa 102398
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>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0478H03
          Length = 167560

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 316   agcttcttcagattgtcgatg 336
             |||||||||||||||||||||
Sbjct: 98866 agcttcttcagattgtcgatg 98846
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>emb|BX571830.6| Zebrafish DNA sequence from clone DKEY-261I16 in linkage group 19,
             complete sequence
          Length = 143486

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 367   gccacagcaacaaacagcagg 387
             |||||||||||||||||||||
Sbjct: 45086 gccacagcaacaaacagcagg 45106
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 212     gccaccgcaaaattcaacttc 232
               |||||||||||||||||||||
Sbjct: 2050775 gccaccgcaaaattcaacttc 2050795
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>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    ttcggaaaagaaggctgaca 165
              ||||||||||||||||||||
Sbjct: 409272 ttcggaaaagaaggctgaca 409291
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>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    ttcggaaaagaaggctgaca 165
              ||||||||||||||||||||
Sbjct: 409082 ttcggaaaagaaggctgaca 409101
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>emb|CR974467.8| Pig DNA sequence from clone CH242-235B3 on chromosome 17, complete
             sequence
          Length = 158975

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   gcaccccagccacagcaaca 378
             ||||||||||||||||||||
Sbjct: 29621 gcaccccagccacagcaaca 29602
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>emb|CR974458.2| Pig DNA sequence from clone CH242-29M17 on chromosome 17, complete
            sequence
          Length = 177939

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 360  caccccagccacagcaacaa 379
            ||||||||||||||||||||
Sbjct: 3478 caccccagccacagcaacaa 3497
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>emb|AJ567372.1|HVU567372 Hordeum vulgare mRNA for putative 3-beta-glucuronosyltransferase
            (pglcat6 gene), clone 3
          Length = 1831

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 151  aaaagaaggctgacaaaagaaaac 174
            |||||||| |||||||||||||||
Sbjct: 1231 aaaagaagcctgacaaaagaaaac 1254
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>emb|AL139345.7| Human DNA sequence from clone RP5-832K2 on chromosome 1 Contains part
             of a novel gene (FLJ34497), complete sequence
          Length = 57963

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 219   caaaattcaacttcagagctattt 242
             |||||| |||||||||||||||||
Sbjct: 43571 caaaatccaacttcagagctattt 43548
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>emb|BX571861.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
             3/17
          Length = 342905

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     acaagattttgtatcgtaat 24
             ||||||||||||||||||||
Sbjct: 86998 acaagattttgtatcgtaat 87017
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>gb|AY855841.2| Enterococcus faecalis plasmid pCF10, complete sequence
          Length = 67673

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    attttgtatcgtaatctgca 29
             ||||||||||||||||||||
Sbjct: 10978 attttgtatcgtaatctgca 10959
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>emb|BX649211.10| Zebrafish DNA sequence from clone DKEY-215O18 in linkage group 3,
             complete sequence
          Length = 125992

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 389   ttttgcagaagaaattgcccattt 412
             ||||| ||||||||||||||||||
Sbjct: 97829 ttttggagaagaaattgcccattt 97852
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>gb|DP000058.1| Felis catus target 117 genomic scaffold
          Length = 458092

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    tgacaaaagaaaacaataca 180
              ||||||||||||||||||||
Sbjct: 407131 tgacaaaagaaaacaataca 407112
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>ref|NM_132773.2| Drosophila melanogaster rab3-GEF CG5627-RA (rab3-GEF), mRNA
          Length = 7948

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 308 catcgatgagcttcttcaga 327
           ||||||||||||||||||||
Sbjct: 760 catcgatgagcttcttcaga 741
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>gb|DQ159622.1| Uncultured bacterium clone hbD_8B putative dissimilatory nitrite
           reductase (nirS) gene, partial cds
          Length = 819

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 324 cagattgtcgatgtcctcgt 343
           ||||||||||||||||||||
Sbjct: 201 cagattgtcgatgtcctcgt 182
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>gb|AC025775.6| Homo sapiens chromosome 5 clone CTD-2299B9, complete sequence
          Length = 95782

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   gcagcaccccagccacagca 375
             ||||||||||||||||||||
Sbjct: 50217 gcagcaccccagccacagca 50198
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>emb|BX005331.8| Zebrafish DNA sequence from clone CH211-66K16 in linkage group 2,
             complete sequence
          Length = 186419

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 163   acaaaagaaaacaatacaacataa 186
             ||||||||||||| ||||||||||
Sbjct: 91860 acaaaagaaaacattacaacataa 91837
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>gb|AC022345.2|AC022345 Drosophila melanogaster, chromosome X, region 12F-13A, BAC clone
              BACR10J19, complete sequence
          Length = 182416

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 308    catcgatgagcttcttcaga 327
              ||||||||||||||||||||
Sbjct: 179088 catcgatgagcttcttcaga 179069
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>gb|AC018488.7|AC018488 Drosophila melanogaster, chromosome X, region 13A-13B, BAC clone
             BACR09F03, complete sequence
          Length = 165118

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 308   catcgatgagcttcttcaga 327
             ||||||||||||||||||||
Sbjct: 30214 catcgatgagcttcttcaga 30195
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>gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 of 74 of the complete
             sequence
          Length = 341520

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 308   catcgatgagcttcttcaga 327
             ||||||||||||||||||||
Sbjct: 30969 catcgatgagcttcttcaga 30950
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>gb|AE016831.1| Enterococcus faecalis V583 plasmid pTEF2, complete sequence
          Length = 57660

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   attttgtatcgtaatctgca 29
            ||||||||||||||||||||
Sbjct: 8055 attttgtatcgtaatctgca 8036


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,169,723
Number of Sequences: 3902068
Number of extensions: 4169723
Number of successful extensions: 88199
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87954
Number of HSP's gapped (non-prelim): 239
length of query: 421
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 399
effective length of database: 17,147,199,772
effective search space: 6841732709028
effective search space used: 6841732709028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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