>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 327     gcggcgagcgcgagcgctgccg 348
               ||||||||||||||||||||||
Sbjct: 2277251 gcggcgagcgcgagcgctgccg 2277230

>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29
          Length = 277000

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 306   cggggcgtccgacccggccgag 327
             ||||||||||||||||||||||
Sbjct: 19561 cggggcgtccgacccggccgag 19540

>ref|XM_467649.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 602

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 323 ccgagcggcgagcgcgagcgctgcc 347
           |||||||||||||| ||||||||||
Sbjct: 301 ccgagcggcgagcgggagcgctgcc 277



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 gagtcgccgccgatggagat 297
           ||||||||||||||||||||
Sbjct: 340 gagtcgccgccgatggagat 321

>ref|XM_547996.2| PREDICTED: Canis familiaris similar to protein phosphatase 1,
            regulatory (inhibitor) subunit 13B (LOC490874), mRNA
          Length = 3630

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 287  ccgatggagatggagatggcg 307
            |||||||||||||||||||||
Sbjct: 3401 ccgatggagatggagatggcg 3421

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 216      atacacgacgagaagagagag 236
                |||||||||||||||||||||
Sbjct: 17524524 atacacgacgagaagagagag 17524544

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 323      ccgagcggcgagcgcgagcgctgcc 347
                |||||||||||||| ||||||||||
Sbjct: 30615194 ccgagcggcgagcgggagcgctgcc 30615218



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 288      cgatggagatggagatggcg 307
                ||||||||||||||||||||
Sbjct: 32350481 cgatggagatggagatggcg 32350500



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 278      gagtcgccgccgatggagat 297
                ||||||||||||||||||||
Sbjct: 30615155 gagtcgccgccgatggagat 30615174

>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 328     cggcgagcgcgagcgctgccg 348
               |||||||||||||||||||||
Sbjct: 2495283 cggcgagcgcgagcgctgccg 2495263

>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0643A10
          Length = 187931

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 323    ccgagcggcgagcgcgagcgctgcc 347
              |||||||||||||| ||||||||||
Sbjct: 127202 ccgagcggcgagcgggagcgctgcc 127226



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    gagtcgccgccgatggagat 297
              ||||||||||||||||||||
Sbjct: 127163 gagtcgccgccgatggagat 127182

>dbj|AP004465.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0690C12
          Length = 139693

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 216    atacacgacgagaagagagag 236
              |||||||||||||||||||||
Sbjct: 135369 atacacgacgagaagagagag 135389

>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0436B06
          Length = 148947

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 216  atacacgacgagaagagagag 236
            |||||||||||||||||||||
Sbjct: 1174 atacacgacgagaagagagag 1194

>dbj|AK111335.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F02, full
           insert sequence
          Length = 602

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 323 ccgagcggcgagcgcgagcgctgcc 347
           |||||||||||||| ||||||||||
Sbjct: 301 ccgagcggcgagcgggagcgctgcc 277



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 gagtcgccgccgatggagat 297
           ||||||||||||||||||||
Sbjct: 340 gagtcgccgccgatggagat 321

>gb|DQ084247.1| Uncultured bacterium BAC10-4, complete fosmid sequence
          Length = 39827

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 342   gctgccggccgaggtcgcggaggac 366
             ||||||||||||||||||| |||||
Sbjct: 32390 gctgccggccgaggtcgcgcaggac 32414



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   gctgccggccgaggtcgcgg 361
             ||||||||||||||||||||
Sbjct: 36424 gctgccggccgaggtcgcgg 36443

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 289     gatggagatggagatggcgg 308
               ||||||||||||||||||||
Sbjct: 4500096 gatggagatggagatggcgg 4500077

>gb|AC144808.2| Mus musculus BAC clone RP24-434O1 from chromosome 5, complete
            sequence
          Length = 152463

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 9    cctgtttcctataagctgaa 28
            ||||||||||||||||||||
Sbjct: 4846 cctgtttcctataagctgaa 4865

>ref|XM_751557.1| Ustilago maydis 521 hypothetical protein (UM00503.1) partial mRNA
          Length = 1440

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 288  cgatggagatggagatggcg 307
            ||||||||||||||||||||
Sbjct: 1068 cgatggagatggagatggcg 1087

>gb|AC122509.2| Mus musculus BAC clone RP24-443G20 from chromosome 16, complete sequence
          Length = 178757

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 289    gatggagatggagatggcgg 308
              ||||||||||||||||||||
Sbjct: 127340 gatggagatggagatggcgg 127359

>ref|XM_659808.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.60363)
           partial mRNA
          Length = 983

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 288 cgatggagatggagatggcg 307
           ||||||||||||||||||||
Sbjct: 105 cgatggagatggagatggcg 86

>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence
          Length = 115475

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 289  gatggagatggagatggcgg 308
            ||||||||||||||||||||
Sbjct: 3796 gatggagatggagatggcgg 3815

>gb|AC136954.14| Medicago truncatula clone mth2-7i1, complete sequence
          Length = 113505

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   gatggagatggagatggcgg 308
             ||||||||||||||||||||
Sbjct: 24777 gatggagatggagatggcgg 24758

>emb|AL022319.2|HS172B20 Human DNA sequence from clone RP1-172B20 on chromosome 22q12.3-13.1
             Contains the 3' part of the CACNA1I gene for
             voltage-dependent calcium channel, alpha 1I subunit, ESTs,
             STSs, GSSs and a putative CpG island, complete sequence
          Length = 213721

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   gatggagatggagatggcgg 308
             ||||||||||||||||||||
Sbjct: 26996 gatggagatggagatggcgg 26977

>emb|CR388130.8| Zebrafish DNA sequence from clone CH211-276A12 in linkage group 15,
             complete sequence
          Length = 78308

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    aaaaggggaagagaccgaca 46
             ||||||||||||||||||||
Sbjct: 29574 aaaaggggaagagaccgaca 29555

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 289     gatggagatggagatggcgg 308
               ||||||||||||||||||||
Sbjct: 4500211 gatggagatggagatggcgg 4500192

>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17,
              complete sequence
          Length = 171442

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 289    gatggagatggagatggcgg 308
              ||||||||||||||||||||
Sbjct: 105388 gatggagatggagatggcgg 105369

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 340     gcgctgccggccgaggtcgc 359
               ||||||||||||||||||||
Sbjct: 7252691 gcgctgccggccgaggtcgc 7252672

>gb|AE004777.1| Pseudomonas aeruginosa PAO1, section 338 of 529 of the complete
            genome
          Length = 12444

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  gccggccgaggtcgcggagg 364
            ||||||||||||||||||||
Sbjct: 4094 gccggccgaggtcgcggagg 4113

>gb|AF482954.1| Petromyzon marinus microsatellite Pmau2 sequence
          Length = 244

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 289 gatggagatggagatggcgg 308
           ||||||||||||||||||||
Sbjct: 129 gatggagatggagatggcgg 148

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 327     gcggcgagcgcgagcgctgccggc 350
               ||||||||||||||||| ||||||
Sbjct: 1616984 gcggcgagcgcgagcgcggccggc 1617007

>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1004_A11
          Length = 132352

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 288    cgatggagatggagatggcg 307
              ||||||||||||||||||||
Sbjct: 126313 cgatggagatggagatggcg 126332

>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1767_D02
          Length = 139145

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   cgatggagatggagatggcg 307
             ||||||||||||||||||||
Sbjct: 11994 cgatggagatggagatggcg 12013

>dbj|AK112037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-D02, full
            insert sequence
          Length = 1789

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 289  gatggagatggagatggcgg 308
            ||||||||||||||||||||
Sbjct: 1692 gatggagatggagatggcgg 1673

>dbj|AK111688.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170G06, full
            insert sequence
          Length = 3994

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 289  gatggagatggagatggcgg 308
            ||||||||||||||||||||
Sbjct: 3901 gatggagatggagatggcgg 3882

>gb|AC007257.9|AC007257 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR24A22,
              complete sequence
          Length = 183007

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 286    gccgatggagatggagatgg 305
              ||||||||||||||||||||
Sbjct: 107174 gccgatggagatggagatgg 107193

>gb|AE003625.3| Drosophila melanogaster chromosome 2L, section 34 of 83 of the complete
              sequence
          Length = 271507

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 286    gccgatggagatggagatgg 305
              ||||||||||||||||||||
Sbjct: 159531 gccgatggagatggagatgg 159512

>gb|AC135187.3| Mus musculus BAC clone RP24-263A3 from 5, complete sequence
          Length = 176333

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     cctgtttcctataagctgaa 28
             ||||||||||||||||||||
Sbjct: 10141 cctgtttcctataagctgaa 10122

>gb|AC169630.2| Mus musculus BAC clone RP23-465E13 from chromosome 16, complete sequence
          Length = 186404

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 289    gatggagatggagatggcgg 308
              ||||||||||||||||||||
Sbjct: 111701 gatggagatggagatggcgg 111720


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,570,175
Number of Sequences: 3902068
Number of extensions: 2570175
Number of successful extensions: 51380
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50615
Number of HSP's gapped (non-prelim): 765
length of query: 366
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 344
effective length of database: 17,147,199,772
effective search space: 5898636721568
effective search space used: 5898636721568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)