| Clone Name | rbaet21h12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009383.1| Triticum aestivum clone wlm96.pk033.c5:fis, full insert mRNA sequence Length = 1314 Score = 224 bits (113), Expect = 1e-55 Identities = 271/324 (83%), Gaps = 31/324 (9%) Strand = Plus / Minus Query: 25 tcattgcatcacatgcagcctttaagagaagcactattaa---tgcagtacatttc---- 77 ||||||||||||||||| |||||||||| ||||||||||| | ||||||||||| Sbjct: 1297 tcattgcatcacatgcaacctttaagagcagcactattaatagtacagtacatttcgaat 1238 Query: 78 ggatagttcgacgacacagccagtagaattcagaatgattc---------atgacaaaat 128 || ||| |||||| |||| ||||||| |||||||||||||| |||||||||| Sbjct: 1237 gggtagatcgacggcacaaccagtagcattcagaatgattcagagctaggatgacaaaat 1178 Query: 129 cagggaaacagaggaaa-accaagccaaagtacatatgcaggttgacgcagcagcgccag 187 ||| |||||||||||| | ||||||||||||||||| ||| ||||||||| Sbjct: 1177 taggaaaacagaggaaacagcaagccaaagtacatattcag----------cagcgccag 1128 Query: 188 cgagcaagagcaagatggtctca----gatcggggggcggttgccatggatctacttggt 243 |||| |||| |||||||||||| || ||| || |||||| |||||||||||||||| Sbjct: 1127 cgaggaagaagaagatggtctcaaagcgagcggtggacggttggcatggatctacttggt 1068 Query: 244 gaactcgatggcaaatgcgttggcgtagatgtaggtggtcttcatggctgcgaagccggc 303 |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 1067 gaactcgatggcaaatgcgttggcgtagatgtaggtggtcttgatggctttgaagccggc 1008 Query: 304 gcccttggccagggcctcgaactc 327 |||||||||||||||||||||||| Sbjct: 1007 gcccttggccagggcctcgaactc 984
>gb|AY226581.1| Triticum aestivum caffeic acid O-methyltransferase (COMT1) mRNA, complete cds Length = 1371 Score = 190 bits (96), Expect = 2e-45 Identities = 216/254 (85%), Gaps = 24/254 (9%) Strand = Plus / Minus Query: 85 tcgacgacacagccagtagaattcagaatgattca---------tgacaaaatcagggaa 135 ||||||||||| |||||||| |||||||||||||| ||||||||| ||| || Sbjct: 1304 tcgacgacacaaccagtagagttcagaatgattcagagctagcatgacaaaattaggaaa 1245 Query: 136 acagaggaaa-accaagccaaagtacatatgcaggttgacgcagcagcgccagcga-gca 193 |||||||||| ||||||||||||||||||| |||||||||||||||| | | Sbjct: 1244 acagaggaaacaccaagccaaagtacatat----------gcagcagcgccagcgaagga 1195 Query: 194 agagcaagatggtctcagatcggggggcggttgccatggatctacttggtgaactcgatg 253 ||| ||||| ||||||||||| || || | |||||||||||||||||||||||||||| Sbjct: 1194 agaagaagat--tctcagatcggcggacg-tcgccatggatctacttggtgaactcgatg 1138 Query: 254 gcaaatgcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgcccttggcc 313 ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||| Sbjct: 1137 gcaaatgcgttggcgtagatgtaagtggtcttgatggctttgaagccggcgcccttggcc 1078 Query: 314 agggcctcgaactc 327 |||||||||||||| Sbjct: 1077 agggcctcgaactc 1064
>gb|DQ223971.1| Triticum aestivum flavonoid O-methyltransferase mRNA, complete cds Length = 1233 Score = 133 bits (67), Expect = 4e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 233 atctacttggtgaactcgatggcaaatgcgttggcgtagatgtaggtggtcttcatggct 292 |||||||| |||||||||||||| ||||||||||||||||||| || ||||||||||| Sbjct: 1147 atctacttagtgaactcgatggcccatgcgttggcgtagatgtaagtagtcttcatggcg 1088 Query: 293 gcgaagccggcgcccttggccagggcctcgaactc 327 ||||| ||||||||||||||||||||||||||||| Sbjct: 1087 gcgaacccggcgcccttggccagggcctcgaactc 1053
>gb|AF153826.1|AF153826 Festuca arundinacea comt3 caffeic acid O-methyltransferase mRNA, complete cds Length = 1430 Score = 85.7 bits (43), Expect = 8e-14 Identities = 82/95 (86%) Strand = Plus / Minus Query: 233 atctacttggtgaactcgatggcaaatgcgttggcgtagatgtaggtggtcttcatggct 292 ||||||||||||||||||||||| | ||||||||||||||||| |||| ||| | | | Sbjct: 1162 atctacttggtgaactcgatggcccaggcgttggcgtagatgtatgtggacttgaagccg 1103 Query: 293 gcgaagccggcgcccttggccagggcctcgaactc 327 |||||||| || |||||||| || ||||||||||| Sbjct: 1102 gcgaagccagctcccttggcgagcgcctcgaactc 1068
>gb|AF153825.1|AF153825 Festuca arundinacea comt1c caffeic acid O-methyltransferase mRNA, complete cds Length = 1438 Score = 77.8 bits (39), Expect = 2e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 233 atctacttggtgaactcgatggcaaatgcgttggcgtagatgtaggtggtcttcatggct 292 ||||||||||||||||||||||| | ||||||||||||||||| |||| ||| | | | Sbjct: 1146 atctacttggtgaactcgatggcccacgcgttggcgtagatgtacgtggacttgacgccg 1087 Query: 293 gcgaagccggcgcccttggccagggcctcgaactc 327 | ||||||||| ||| |||| || ||||||||||| Sbjct: 1086 gtgaagccggctcccctggcgagcgcctcgaactc 1052 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Minus Query: 85 tcgacgacacagccagtagaattcagaatg 114 ||||||||||| ||| |||||||||||||| Sbjct: 1332 tcgacgacacaaccattagaattcagaatg 1303
>ref|XM_480185.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1425 Score = 69.9 bits (35), Expect = 5e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 235 ctacttggtgaactcgatggcaaatgcgttggcgtagatgtaggtgg 281 ||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 1189 ctacttggtgaactcgatggcccaggcgttggcgtagatgtaggtgg 1143
>dbj|AK061859.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G09, full insert sequence Length = 1227 Score = 69.9 bits (35), Expect = 5e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 235 ctacttggtgaactcgatggcaaatgcgttggcgtagatgtaggtgg 281 ||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 987 ctacttggtgaactcgatggcccaggcgttggcgtagatgtaggtgg 941
>gb|AF153824.1|AF153824 Festuca arundinacea comt1b caffeic acid O-methyltransferase mRNA, complete cds Length = 1440 Score = 69.9 bits (35), Expect = 5e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 233 atctacttggtgaactcgatggcaaatgcgttggcgtagatgtaggtggtcttcatggct 292 ||||||||||||||||||||||| | ||||| ||||||||||| |||| ||| | | | Sbjct: 1155 atctacttggtgaactcgatggcccacgcgtttgcgtagatgtacgtggacttgacgccg 1096 Query: 293 gcgaagccggcgcccttggccagggcctcgaactc 327 | ||| || || ||| ||||||||||||||||||| Sbjct: 1095 gtgaacccagctcccctggccagggcctcgaactc 1061 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 85 tcgacgacacagccagtagaattcagaat 113 ||||||||||||||| |||||||||||| Sbjct: 1342 tcgacgacacagccatcagaattcagaat 1314
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 69.9 bits (35), Expect = 5e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 235 ctacttggtgaactcgatggcaaatgcgttggcgtagatgtaggtgg 281 ||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 3331696 ctacttggtgaactcgatggcccaggcgttggcgtagatgtaggtgg 3331742
>gb|DQ288259.1| Oryza sativa (japonica cultivar-group) O-methyltransferase (ROMT-9) mRNA, complete cds Length = 1190 Score = 69.9 bits (35), Expect = 5e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 235 ctacttggtgaactcgatggcaaatgcgttggcgtagatgtaggtgg 281 ||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 1121 ctacttggtgaactcgatggcccaggcgttggcgtagatgtaggtgg 1075
>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0438H08 Length = 148626 Score = 69.9 bits (35), Expect = 5e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 235 ctacttggtgaactcgatggcaaatgcgttggcgtagatgtaggtgg 281 ||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 109263 ctacttggtgaactcgatggcccaggcgttggcgtagatgtaggtgg 109309
>gb|AF033540.1|AF033540 Lolium perenne caffeic acid O-methyltransferase (OMT3) mRNA, complete cds Length = 1436 Score = 67.9 bits (34), Expect = 2e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 234 tctacttggtgaactcgatggcaaatgcgttggcgtagatgtaggtggtcttcatggctg 293 |||||||||||||||||||||| | ||||||||||||||||| |||| ||| | | | | Sbjct: 1172 tctacttggtgaactcgatggcccaggcgttggcgtagatgtatgtggacttgaagccgg 1113 Query: 294 cgaagccggcgcccttggccagggcctcgaactc 327 ||||||| || ||| |||| || |||||| |||| Sbjct: 1112 cgaagccagctcccctggcgagcgcctcgtactc 1079
>gb|AF153823.1|AF153823 Festuca arundinacea comt1a caffeic acid O-methyltransferase mRNA, complete cds Length = 1446 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 233 atctacttggtgaactcgatggcaaatgcgttggcgtagatgtaggtgg 281 ||||||||||||||||||||||| | ||||||||||||||||| |||| Sbjct: 1129 atctacttggtgaactcgatggcccacgcgttggcgtagatgtacgtgg 1081
>gb|AF033538.1|AF033538 Lolium perenne caffeic acid O-methyltransferase (OMT1) mRNA, complete cds Length = 1455 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 233 atctacttggtgaactcgatggcaaatgcgttggcgtagatgtaggtgg 281 ||||||||||||||||||||||| | ||||||||||||||||| |||| Sbjct: 1136 atctacttggtgaactcgatggcccacgcgttggcgtagatgtacgtgg 1088
>gb|AF010291.1|AF010291 Lolium perenne bispecific caffeic acid/5-hydroxyferulic acid O-methyltransferase mRNA, complete cds Length = 1475 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 233 atctacttggtgaactcgatggcaaatgcgttggcgtagatgtaggtgg 281 ||||||||||||||||||||||| | ||||||||||||||||| |||| Sbjct: 1155 atctacttggtgaactcgatggcccacgcgttggcgtagatgtacgtgg 1107
>gb|AY323304.1| Zea mays inbred line Mo17 O-methyltransferase (comt) gene, complete cds Length = 2955 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtaggtggtcttcatggctgcga 296 ||||| ||||||||||||| | |||||||||||||||||||||| ||| | | | || Sbjct: 2617 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 2558 Query: 297 agccggcgcccttggc 312 |||||||||||||||| Sbjct: 2557 agccggcgcccttggc 2542
>gb|AY323302.1| Zea mays inbred line Lan496 O-methyltransferase (comt) gene, complete cds Length = 3282 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtaggtggtcttcatggctgcga 296 ||||| ||||||||||||| | |||||||||||||||||||||| ||| | | | || Sbjct: 2944 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 2885 Query: 297 agccggcgcccttggc 312 |||||||||||||||| Sbjct: 2884 agccggcgcccttggc 2869
>gb|AY323295.1| Zea mays inbred line B73 O-methyltransferase (comt) gene, complete cds Length = 2676 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtaggtggtcttcatggctgcga 296 ||||| ||||||||||||| | |||||||||||||||||||||| ||| | | | || Sbjct: 2662 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 2603 Query: 297 agccggcgcccttggc 312 |||||||||||||||| Sbjct: 2602 agccggcgcccttggc 2587
>gb|AY323287.1| Zea mays inbred line F564 O-methyltransferase (comt) gene, complete cds Length = 2982 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtaggtggtcttcatggctgcga 296 ||||| ||||||||||||| | |||||||||||||||||||||| ||| | | | || Sbjct: 2968 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 2909 Query: 297 agccggcgcccttggc 312 |||||||||||||||| Sbjct: 2908 agccggcgcccttggc 2893
>gb|AY323284.1| Zea mays inbred line 16 O-methyltransferase (comt) gene, complete cds Length = 3190 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtaggtggtcttcatggctgcga 296 ||||| ||||||||||||| | |||||||||||||||||||||| ||| | | | || Sbjct: 3176 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 3117 Query: 297 agccggcgcccttggc 312 |||||||||||||||| Sbjct: 3116 agccggcgcccttggc 3101
>gb|AY323282.1| Zea mays inbred line Wis93-3520 O-methyltransferase (comt) gene, complete cds Length = 3088 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtaggtggtcttcatggctgcga 296 ||||| ||||||||||||| | |||||||||||||||||||||| ||| | | | || Sbjct: 3074 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 3015 Query: 297 agccggcgcccttggc 312 |||||||||||||||| Sbjct: 3014 agccggcgcccttggc 2999
>gb|AY323281.1| Zea mays inbred line Wis94-443 O-methyltransferase (comt) gene, complete cds Length = 3095 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtaggtggtcttcatggctgcga 296 ||||| ||||||||||||| | |||||||||||||||||||||| ||| | | | || Sbjct: 3081 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 3022 Query: 297 agccggcgcccttggc 312 |||||||||||||||| Sbjct: 3021 agccggcgcccttggc 3006
>gb|AY323276.1| Zea mays inbred line Quebec28 O-methyltransferase (comt) gene, complete cds Length = 3061 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtaggtggtcttcatggctgcga 296 ||||| ||||||||||||| | |||||||||||||||||||||| ||| | | | || Sbjct: 3059 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 3000 Query: 297 agccggcgcccttggc 312 |||||||||||||||| Sbjct: 2999 agccggcgcccttggc 2984
>gb|AY323275.1| Zea mays inbred line F66 O-methyltransferase (comt) gene, complete cds Length = 2041 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtaggtggtcttcatggctgcga 296 ||||| ||||||||||||| | |||||||||||||||||||||| ||| | | | || Sbjct: 2039 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 1980 Query: 297 agccggcgcccttggc 312 |||||||||||||||| Sbjct: 1979 agccggcgcccttggc 1964
>gb|AY323274.1| Zea mays inbred line F7025 O-methyltransferase (comt) gene, complete cds Length = 2326 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtaggtggtcttcatggctgcga 296 ||||| ||||||||||||| | |||||||||||||||||||||| ||| | | | || Sbjct: 1988 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 1929 Query: 297 agccggcgcccttggc 312 |||||||||||||||| Sbjct: 1928 agccggcgcccttggc 1913
>gb|AY323273.1| Zea mays inbred line Du101 O-methyltransferase (comt) gene, complete cds Length = 2074 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtaggtggtcttcatggctgcga 296 ||||| ||||||||||||| | |||||||||||||||||||||| ||| | | | || Sbjct: 2060 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 2001 Query: 297 agccggcgcccttggc 312 |||||||||||||||| Sbjct: 2000 agccggcgcccttggc 1985
>gb|AY323272.1| Zea mays inbred line MBS847 O-methyltransferase (comt) gene, complete cds Length = 2326 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtaggtggtcttcatggctgcga 296 ||||| ||||||||||||| | |||||||||||||||||||||| ||| | | | || Sbjct: 1988 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 1929 Query: 297 agccggcgcccttggc 312 |||||||||||||||| Sbjct: 1928 agccggcgcccttggc 1913
>gb|M73235.1|MZEOMTH Zea mays O-methyltransferase (OMT) gene, complete cds Length = 2512 Score = 63.9 bits (32), Expect = 3e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtaggtggtcttcatggctgcga 296 ||||| ||||||||||||| | |||||||||||||||||||||| ||| | | | || Sbjct: 2139 acttgatgaactcgatggcccaggcgttggcgtagatgtaggtggccttgaacccggaga 2080 Query: 297 agccggcgcccttggc 312 |||||||||||||||| Sbjct: 2079 agccggcgcccttggc 2064
>dbj|AB122056.1| Oryza sativa (japonica cultivar-group) COMT mRNA for caffeic acid o-methyl transferase, partial cds Length = 1067 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 235 ctacttggtgaactcgatggcaaatgcgttggcgtagatgtaggtgg 281 |||||| |||||||||||||| | |||||||||||||||||||||| Sbjct: 807 ctactttgtgaactcgatggcccaggcgttggcgtagatgtaggtgg 761
>dbj|AK064768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A05, full insert sequence Length = 1425 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 235 ctacttggtgaactcgatggcaaatgcgttggcgtagatgtaggtgg 281 |||||| |||||||||||||| | |||||||||||||||||||||| Sbjct: 1189 ctactttgtgaactcgatggcccaggcgttggcgtagatgtaggtgg 1143
>emb|AJ231133.1|SOF231133 Saccharum officinarum mRNA for caffeic acid 3-O-methyltransferase Length = 1486 Score = 60.0 bits (30), Expect = 5e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 236 tacttggtgaactcgatggcaaatgcgttggcgtagatgtaggtgg 281 |||||| ||||||||||||| | |||||||||||||||||||||| Sbjct: 1192 tacttgatgaactcgatggcccaggcgttggcgtagatgtaggtgg 1147
>gb|AY365419.1| Saccharum hybrid cultivar caffeic acid 3-O-methyltransferase (COMT) gene, complete cds Length = 2012 Score = 60.0 bits (30), Expect = 5e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 236 tacttggtgaactcgatggcaaatgcgttggcgtagatgtaggtgg 281 |||||| ||||||||||||| | |||||||||||||||||||||| Sbjct: 2011 tacttgatgaactcgatggcccaggcgttggcgtagatgtaggtgg 1966
>gb|AY217766.1| Sorghum bicolor caffeic acid O-methyltransferase gene, complete cds Length = 3312 Score = 60.0 bits (30), Expect = 5e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 236 tacttggtgaactcgatggcaaatgcgttggcgtagatgtaggtgg 281 |||||| ||||||||||||| | |||||||||||||||||||||| Sbjct: 2778 tacttgatgaactcgatggcccaggcgttggcgtagatgtaggtgg 2733
>gb|AF387790.1|AF387790 Sorghum bicolor O-methyltransferase mRNA, complete cds Length = 1458 Score = 60.0 bits (30), Expect = 5e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 236 tacttggtgaactcgatggcaaatgcgttggcgtagatgtaggtgg 281 |||||| ||||||||||||| | |||||||||||||||||||||| Sbjct: 1197 tacttgatgaactcgatggcccaggcgttggcgtagatgtaggtgg 1152
>gb|AY094283.1| Zea mays cultivar F_7 caffeic acid 3-O-methyltransferase, 3' UTR and partial cds Length = 320 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtagg 278 ||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 265 acttgatgaactcgatggcccaggcgttggcgtagatgtagg 306
>gb|AY094282.1| Zea mays cultivar D_9 caffeic acid 3-O-methyltransferase, 3' UTR and partial cds Length = 337 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtagg 278 ||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 282 acttgatgaactcgatggcccaggcgttggcgtagatgtagg 323
>gb|AY094281.1| Zea mays cultivar D_6 caffeic acid 3-O-methyltransferase, 3' UTR and partial cds Length = 321 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtagg 278 ||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 266 acttgatgaactcgatggcccaggcgttggcgtagatgtagg 307
>gb|AY094280.1| Zea mays cultivar F_1 caffeic acid 3-O-methyltransferase, 3' UTR and partial cds Length = 320 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtagg 278 ||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 265 acttgatgaactcgatggcccaggcgttggcgtagatgtagg 306
>gb|AY094279.1| Zea mays cultivar Mo17 caffeic acid 3-O-methyltransferase, 3' UTR and partial cds Length = 337 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtagg 278 ||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 282 acttgatgaactcgatggcccaggcgttggcgtagatgtagg 323
>gb|AY094276.1| Zea mays cultivar 684 caffeic acid 3-O-methyltransferase, 3' UTR and partial cds Length = 328 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtagg 278 ||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 273 acttgatgaactcgatggcccaggcgttggcgtagatgtagg 314
>gb|AY094275.1| Zea mays cultivar I_1 caffeic acid 3-O-methyltransferase, 3' UTR and partial cds Length = 304 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtagg 278 ||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 249 acttgatgaactcgatggcccaggcgttggcgtagatgtagg 290
>gb|AY094274.1| Zea mays cultivar F_2 caffeic acid 3-O-methyltransferase, 3' UTR and partial cds Length = 286 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtagg 278 ||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 231 acttgatgaactcgatggcccaggcgttggcgtagatgtagg 272
>gb|AY094273.1| Zea mays cultivar G_1 caffeic acid 3-O-methyltransferase, 3' UTR and partial cds Length = 308 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtagg 278 ||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 253 acttgatgaactcgatggcccaggcgttggcgtagatgtagg 294
>gb|AY094271.1| Zea mays cultivar F_3 caffeic acid 3-O-methyltransferase, 3' UTR and partial cds Length = 296 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtagg 278 ||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 241 acttgatgaactcgatggcccaggcgttggcgtagatgtagg 282
>gb|AY094270.1| Zea mays cultivar F_5 caffeic acid 3-O-methyltransferase, 3' UTR and partial cds Length = 308 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtagg 278 ||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 253 acttgatgaactcgatggcccaggcgttggcgtagatgtagg 294
>gb|AY094269.1| Zea mays cultivar H_5 caffeic acid 3-O-methyltransferase, 3' UTR and partial cds Length = 320 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtagg 278 ||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 265 acttgatgaactcgatggcccaggcgttggcgtagatgtagg 306
>gb|AY094268.1| Zea mays cultivar H_3 caffeic acid 3-O-methyltransferase, 3' UTR and partial cds Length = 320 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtagg 278 ||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 265 acttgatgaactcgatggcccaggcgttggcgtagatgtagg 306
>gb|AY094267.1| Zea mays cultivar J40 caffeic acid 3-O-methyltransferase, 3' UTR and partial cds Length = 307 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtagg 278 ||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 252 acttgatgaactcgatggcccaggcgttggcgtagatgtagg 293
>gb|AY094266.1| Zea mays cultivar 647 caffeic acid 3-O-methyltransferase, 3' UTR and partial cds Length = 345 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtagg 278 ||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 290 acttgatgaactcgatggcccaggcgttggcgtagatgtagg 331
>gb|AY094265.1| Zea mays cultivar B_1 caffeic acid 3-O-methyltransferase, 3' UTR and partial cds Length = 324 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtagg 278 ||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 269 acttgatgaactcgatggcccaggcgttggcgtagatgtagg 310
>gb|AY094264.1| Zea mays cultivar F_6 caffeic acid 3-O-methyltransferase, 3' UTR and partial cds Length = 324 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtagg 278 ||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 269 acttgatgaactcgatggcccaggcgttggcgtagatgtagg 310
>gb|AY094263.1| Zea mays cultivar C_5 caffeic acid 3-O-methyltransferase, 3' UTR and partial cds Length = 324 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtagg 278 ||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 269 acttgatgaactcgatggcccaggcgttggcgtagatgtagg 310
>gb|AY094262.1| Zea mays cultivar H_1 caffeic acid 3-O-methyltransferase, 3' UTR and partial cds Length = 322 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 237 acttggtgaactcgatggcaaatgcgttggcgtagatgtagg 278 ||||| ||||||||||||| | ||||||||||||||||||| Sbjct: 267 acttgatgaactcgatggcccaggcgttggcgtagatgtagg 308
>gb|AY323305.1| Zea mays inbred line EP1 O-methyltransferase (comt) gene, partial cds Length = 2782 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgcccttggc 312 |||||||||||||||||||||| ||| | | | |||||||||||||||||| Sbjct: 2778 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgcccttggc 2726
>gb|AY323303.1| Zea mays inbred line W117 O-methyltransferase (comt) gene, partial cds Length = 2925 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgcccttggc 312 |||||||||||||||||||||| ||| | | | |||||||||||||||||| Sbjct: 2921 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgcccttggc 2869
>gb|AY323301.1| Zea mays inbred line 212 O-methyltransferase (comt) gene, partial cds Length = 2757 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgcccttggc 312 |||||||||||||||||||||| ||| | | | |||||||||||||||||| Sbjct: 2753 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgcccttggc 2701
>gb|AY323300.1| Zea mays inbred line F7012 O-methyltransferase (comt) gene, partial cds Length = 2850 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgcccttggc 312 |||||||||||||||||||||| ||| | | | |||||||||||||||||| Sbjct: 2846 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgcccttggc 2794
>gb|AY323299.1| Zea mays inbred line F4 O-methyltransferase (comt) gene, partial cds Length = 2675 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgcccttggc 312 |||||||||||||||||||||| ||| | | | |||||||||||||||||| Sbjct: 2669 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgcccttggc 2617
>gb|AY323298.1| Zea mays inbred line F324 O-methyltransferase (comt) gene, partial cds Length = 2782 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgcccttggc 312 |||||||||||||||||||||| ||| | | | |||||||||||||||||| Sbjct: 2778 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgcccttggc 2726
>gb|AY323297.1| Zea mays inbred line F288 O-methyltransferase (comt) gene, partial cds Length = 2927 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgcccttggc 312 |||||||||||||||||||||| ||| | | | |||||||||||||||||| Sbjct: 2921 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgcccttggc 2869
>gb|AY323296.1| Zea mays inbred line F2 O-methyltransferase (comt) gene, partial cds Length = 3206 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgcccttggc 312 |||||||||||||||||||||| ||| | | | |||||||||||||||||| Sbjct: 3199 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgcccttggc 3147
>gb|AY323293.1| Zea mays Rottaler Silomais O-methyltransferase (comt) gene, partial cds Length = 3151 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgcccttggc 312 |||||||||||||||||||||| ||| | | | |||||||||||||||||| Sbjct: 3145 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgcccttggc 3093
>gb|AY323291.1| Zea mays inbred line F1 O-methyltransferase (comt) gene, partial cds Length = 3102 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgcccttggc 312 |||||||||||||||||||||| ||| | | | |||||||||||||||||| Sbjct: 3098 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgcccttggc 3046
>gb|AY323290.1| Zea mays inbred line F113 O-methyltransferase (comt) gene, partial cds Length = 3154 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgcccttggc 312 |||||||||||||||||||||| ||| | | | |||||||||||||||||| Sbjct: 3150 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgcccttggc 3098
>gb|AY323289.1| Zea mays inbred line F271 O-methyltransferase (comt) gene, partial cds Length = 2892 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgcccttggc 312 |||||||||||||||||||||| ||| | | | |||||||||||||||||| Sbjct: 2888 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgcccttggc 2836
>gb|AY323288.1| Zea mays inbred line F286 O-methyltransferase (comt) gene, partial cds Length = 2951 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgcccttggc 312 |||||||||||||||||||||| ||| | | | |||||||||||||||||| Sbjct: 2945 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgcccttggc 2893
>gb|AY323286.1| Zea mays inbred line F64 O-methyltransferase (comt) gene, partial cds Length = 2948 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgcccttggc 312 |||||||||||||||||||||| ||| | | | |||||||||||||||||| Sbjct: 2944 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgcccttggc 2892
>gb|AY323285.1| Zea mays inbred line F7 O-methyltransferase (comt) gene, partial cds Length = 3131 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgcccttggc 312 |||||||||||||||||||||| ||| | | | |||||||||||||||||| Sbjct: 3127 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgcccttggc 3075
>gb|AY323283.1| Zea mays inbred line W64A O-methyltransferase (comt) gene, partial cds Length = 2748 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgcccttggc 312 |||||||||||||||||||||| ||| | | | |||||||||||||||||| Sbjct: 2744 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgcccttggc 2692
>gb|AY323278.1| Zea mays Sibiriaka O-methyltransferase (comt) gene, partial cds Length = 3146 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgcccttggc 312 |||||||||||||||||||||| ||| | | | |||||||||||||||||| Sbjct: 3140 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgcccttggc 3088
>gb|AC122218.4| Mus musculus BAC clone RP23-118J7 from chromosome 16, complete sequence Length = 196599 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 268 gtagatgtaggtggtcttcatg 289 |||||||||||||||||||||| Sbjct: 42328 gtagatgtaggtggtcttcatg 42349
>gb|AY323294.1| Zea mays inbred line B14 O-methyltransferase (comt) gene, partial cds Length = 2643 Score = 44.1 bits (22), Expect = 0.28 Identities = 43/50 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgccctt 309 |||||||||||||||||||||| ||| | | | ||||||||||||||| Sbjct: 2639 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgccctt 2590
>gb|AY323292.1| Zea mays inbred line DE811 O-methyltransferase (comt) gene, partial cds Length = 2639 Score = 44.1 bits (22), Expect = 0.28 Identities = 43/50 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgccctt 309 |||||||||||||||||||||| ||| | | | ||||||||||||||| Sbjct: 2635 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgccctt 2586
>gb|AY323280.1| Zea mays Noordlander O-methyltransferase (comt) gene, partial cds Length = 3105 Score = 44.1 bits (22), Expect = 0.28 Identities = 43/50 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgccctt 309 |||||||||||||||||||||| ||| | | | ||||||||||||||| Sbjct: 3101 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgccctt 3052
>gb|AY323279.1| Zea mays Rainbow Flint O-methyltransferase (comt) gene, partial cds Length = 3111 Score = 44.1 bits (22), Expect = 0.28 Identities = 43/50 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgccctt 309 |||||||||||||||||||||| ||| | | | ||||||||||||||| Sbjct: 3105 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgccctt 3056
>gb|AY323277.1| Zea mays Polar Dent O-methyltransferase (comt) gene, partial cds Length = 3073 Score = 44.1 bits (22), Expect = 0.28 Identities = 43/50 (86%) Strand = Plus / Minus Query: 260 gcgttggcgtagatgtaggtggtcttcatggctgcgaagccggcgccctt 309 |||||||||||||||||||||| ||| | | | ||||||||||||||| Sbjct: 3067 gcgttggcgtagatgtaggtggccttgaacccggagaagccggcgccctt 3018
>gb|AC087840.16| Mus musculus strain C57BL/6J chromosome 16 clone rp23-240k10, complete sequence Length = 190761 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 268 gtagatgtaggtggtcttcatg 289 |||||||||||||||||||||| Sbjct: 172539 gtagatgtaggtggtcttcatg 172560
>emb|AL022158.1|HS326I13 Human DNA sequence from clone RP3-326I13 on chromosome Xp11.23-11.3 Contains a novel gene, complete sequence Length = 108248 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 cactattaatgcagtacattt 76 ||||||||||||||||||||| Sbjct: 100599 cactattaatgcagtacattt 100619
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 cgcccttggccagggcctcga 323 ||||||||||||||||||||| Sbjct: 4318826 cgcccttggccagggcctcga 4318846
>gb|AC105915.5| Homo sapiens BAC clone RP11-69D13 from 4, complete sequence Length = 178734 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 atgacaaaatcagggaaacag 139 ||||||||||||||||||||| Sbjct: 175132 atgacaaaatcagggaaacag 175152
>emb|CT009480.7| Mouse DNA sequence from clone RP23-126N4 on chromosome 14, complete sequence Length = 222984 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 tcagaatgattcatgacaaa 126 |||||||||||||||||||| Sbjct: 135246 tcagaatgattcatgacaaa 135227
>gb|AC102543.9| Mus musculus chromosome 14, clone RP23-112K14, complete sequence Length = 214356 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 tcagaatgattcatgacaaa 126 |||||||||||||||||||| Sbjct: 158719 tcagaatgattcatgacaaa 158700
>gb|AC146173.2| Pan troglodytes BAC clone RP43-36F20 from 7, complete sequence Length = 197121 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 atgacaaaatcagggaaaca 138 |||||||||||||||||||| Sbjct: 54178 atgacaaaatcagggaaaca 54197
>gb|AC092098.3| Homo sapiens BAC clone RP11-533K11 from 7, complete sequence Length = 198786 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 atgacaaaatcagggaaaca 138 |||||||||||||||||||| Sbjct: 118797 atgacaaaatcagggaaaca 118816
>gb|AC163089.3| Mus musculus chromosome 5, clone RP23-346P15, complete sequence Length = 197826 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gaggaaaaccaagccaaagt 158 |||||||||||||||||||| Sbjct: 22286 gaggaaaaccaagccaaagt 22305
>emb|AL837512.2| Mouse DNA sequence from clone RP23-125J3 on chromosome 13 Contains a novel gene, complete sequence Length = 99030 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 tgacaaaatcagggaaacag 139 |||||||||||||||||||| Sbjct: 22887 tgacaaaatcagggaaacag 22906
>gb|AC067964.18| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-337K7, complete sequence Length = 219769 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 gaggaaaaccaagccaaagt 158 |||||||||||||||||||| Sbjct: 165979 gaggaaaaccaagccaaagt 165998
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 cggcgcccttggccagggcctcga 323 ||||||| |||||||||||||||| Sbjct: 1740172 cggcgccattggccagggcctcga 1740195
>gb|AC161881.3| Mus musculus BAC clone RP23-200C1 from chromosome 13, complete sequence Length = 176749 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 tgacaaaatcagggaaacag 139 |||||||||||||||||||| Sbjct: 68597 tgacaaaatcagggaaacag 68616
>gb|AE004912.1| Pseudomonas aeruginosa PAO1, section 473 of 529 of the complete genome Length = 12498 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cgcccttggccagggcctcg 322 |||||||||||||||||||| Sbjct: 5666 cgcccttggccagggcctcg 5685
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ccttggccagggcctcgaac 325 |||||||||||||||||||| Sbjct: 4157398 ccttggccagggcctcgaac 4157417
>gb|AC172026.3| Gallus gallus BAC clone CH261-126J23 from chromosome ul, complete sequence Length = 179661 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 ggggggcggttgccatggat 234 |||||||||||||||||||| Sbjct: 90920 ggggggcggttgccatggat 90901
>gb|AF016323.1|AF016323 Phytomonas serpens small subunit Ribosomal RNA gene, partial sequence Length = 2103 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ccagtagaattcagaatgattcat 120 ||||||||||||||||| |||||| Sbjct: 1638 ccagtagaattcagaattattcat 1661
>gb|AF016322.1|AF016322 Phytomonas sp. small subunit Ribosomal RNA gene, partial sequence Length = 2172 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ccagtagaattcagaatgattcat 120 ||||||||||||||||| |||||| Sbjct: 1673 ccagtagaattcagaattattcat 1696
>gb|AF016321.1|AF016321 Phytomonas sp. small subunit Ribosomal RNA gene, partial sequence Length = 2168 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ccagtagaattcagaatgattcat 120 ||||||||||||||||| |||||| Sbjct: 1672 ccagtagaattcagaattattcat 1695
>gb|AF016320.1|AF016320 Phytomonas serpens small subunit Ribosomal RNA gene, partial sequence Length = 2143 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ccagtagaattcagaatgattcat 120 ||||||||||||||||| |||||| Sbjct: 1663 ccagtagaattcagaattattcat 1686
>gb|U39577.1|PSU39577 Phytomonas serpens small subunit ribosomal RNA Length = 2094 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ccagtagaattcagaatgattcat 120 ||||||||||||||||| |||||| Sbjct: 1626 ccagtagaattcagaattattcat 1649
>gb|L35077.1|PMNRGDB Phytomonas sp. (isolate E. hi. Se) 16S-like small subunit ribosomal RNA gene Length = 2183 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 ccagtagaattcagaatgattcat 120 ||||||||||||||||| |||||| Sbjct: 1674 ccagtagaattcagaattattcat 1697 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,002,259 Number of Sequences: 3902068 Number of extensions: 3002259 Number of successful extensions: 63929 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63523 Number of HSP's gapped (non-prelim): 371 length of query: 327 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 305 effective length of database: 17,147,199,772 effective search space: 5229895930460 effective search space used: 5229895930460 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)