ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet21h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
2dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
3dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
4dbj|AK111616.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
5dbj|AK100321.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
6ref|XM_482757.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.006
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
8dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
9gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 44 0.34
10emb|CR382287.6| Human DNA sequence from clone bP-21216K13 on chr... 44 0.34
11emb|AL627122.18| Mouse DNA sequence from clone RP23-132E8 on chr... 44 0.34
12ref|XM_465852.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
13gb|AC165370.4| Mus musculus BAC clone RP23-2N3 from chromosome 1... 42 1.4
14emb|AL157396.9| Human DNA sequence from clone RP11-437J2 on chro... 42 1.4
15gb|AC156039.4| Mus musculus BAC clone RP23-24C2 from chromosome ... 42 1.4
16dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome 42 1.4
17gb|AC080043.5| Homo sapiens chromosome , clone RP11-45M9, comple... 42 1.4
18gb|AC023566.11| Homo sapiens chromosome 8, clone RP11-660D5, com... 42 1.4
19dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
20dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
21dbj|AP005688.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
22dbj|AP006446.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
23dbj|AP006176.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
24dbj|AP004022.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
25dbj|AP005069.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
26emb|BX648839.1|HSM808990 Homo sapiens mRNA; cDNA DKFZp686D0944 (... 42 1.4
27dbj|AK100987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
28dbj|AP003462.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 1.4
29gb|AC133944.4| Mus musculus BAC clone RP24-113L10 from 10, compl... 42 1.4
30gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 5.4
31gb|AC027119.5| Homo sapiens chromosome 3 clone RP11-113L10 map 3... 40 5.4
32emb|CR759774.13| Zebrafish DNA sequence from clone CH211-147P17 ... 40 5.4
33gb|CP000001.1| Bacillus cereus E33L, complete genome 40 5.4
34gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 40 5.4
35emb|AL035699.4|HS73H22 Human DNA sequence from clone RP1-73H22 o... 40 5.4
36emb|Z80904.1|CICOS1 Ciona intestinalis DNA sequence from cosmid ... 40 5.4
37emb|CR931740.2| Medicago truncatula chromosome 5 clone mth2-67g1... 40 5.4
38gb|AC016383.11| Homo sapiens chromosome 18, clone RP11-25O3, com... 40 5.4
39gb|AC010735.11| Homo sapiens BAC clone RP11-395N3 from 2, comple... 40 5.4
40gb|AC154119.8| Mus musculus chromosome 1, clone RP24-103A6, comp... 40 5.4
41emb|BX957233.8| Zebrafish DNA sequence from clone DKEY-224H10 in... 40 5.4
42gb|AC113964.18| Mus musculus chromosome 16, clone RP23-31O16, co... 40 5.4
43gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 5.4
44gb|AC087276.13| Homo sapiens chromosome 11, clone RP11-484D2, co... 40 5.4 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                            
Query: 289      tagaggtgagcggggagcttgggctccaacacagcctccagggggaacttgcgcgacgtg 348
                |||||||||||||| ||||||||||| |  |||||||| || ||||||||||||| ||| 
Sbjct: 16335519 tagaggtgagcgggcagcttgggctcgacgacagcctcaagcgggaacttgcgcggcgtc 16335460

                                                    
Query: 349      gtgagcccgaacacctcgtccatgctcagctgctcc 384
                |  |  ||||| | ||| ||||||||||||||||||
Sbjct: 16335459 gacaagccgaagatctcctccatgctcagctgctcc 16335424



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 92/113 (81%)
 Strand = Plus / Minus

                                                                            
Query: 289      tagaggtgagcggggagcttgggctccaacacagcctccagggggaacttgcgcgacgtg 348
                ||||||| ||| |||||||||||||| |  ||| |||| || ||||||||||||| ||| 
Sbjct: 16341800 tagaggtcagccgggagcttgggctcgacgacaacctcgagcgggaacttgcgcggcgtc 16341741

                                                                     
Query: 349      gtgagcccgaacacctcgtccatgctcagctgctccgccgccattccgtcggg 401
                |  |  ||||| | ||| ||||||||||||||||||  || ||| ||||||||
Sbjct: 16341740 gacaaaccgaagatctcctccatgctcagctgctccttcgtcatgccgtcggg 16341688



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 347     tggtgagcccgaacacctcgtccatgctcagct 379
               ||||||||||||| | ||| |||||||||||||
Sbjct: 4721716 tggtgagcccgaagatctcctccatgctcagct 4721748



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 347     tggtgagcccgaacacctcgtccatgctcagct 379
               ||||||||||||| | ||| |||||||||||||
Sbjct: 4683141 tggtgagcccgaagatctcttccatgctcagct 4683173
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>dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0046G12
          Length = 189391

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                         
Query: 289   tagaggtgagcggggagcttgggctccaacacagcctccagggggaacttgcgcgacgtg 348
             |||||||||||||| ||||||||||| |  |||||||| || ||||||||||||| ||| 
Sbjct: 24066 tagaggtgagcgggcagcttgggctcgacgacagcctcaagcgggaacttgcgcggcgtc 24007

                                                 
Query: 349   gtgagcccgaacacctcgtccatgctcagctgctcc 384
             |  |  ||||| | ||| ||||||||||||||||||
Sbjct: 24006 gacaagccgaagatctcctccatgctcagctgctcc 23971



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 92/113 (81%)
 Strand = Plus / Minus

                                                                         
Query: 289   tagaggtgagcggggagcttgggctccaacacagcctccagggggaacttgcgcgacgtg 348
             ||||||| ||| |||||||||||||| |  ||| |||| || ||||||||||||| ||| 
Sbjct: 30347 tagaggtcagccgggagcttgggctcgacgacaacctcgagcgggaacttgcgcggcgtc 30288

                                                                  
Query: 349   gtgagcccgaacacctcgtccatgctcagctgctccgccgccattccgtcggg 401
             |  |  ||||| | ||| ||||||||||||||||||  || ||| ||||||||
Sbjct: 30287 gacaaaccgaagatctcctccatgctcagctgctccttcgtcatgccgtcggg 30235
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>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1344_B01
          Length = 170912

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                          
Query: 289    tagaggtgagcggggagcttgggctccaacacagcctccagggggaacttgcgcgacgtg 348
              |||||||||||||| ||||||||||| |  |||||||| || ||||||||||||| ||| 
Sbjct: 152035 tagaggtgagcgggcagcttgggctcgacgacagcctcaagcgggaacttgcgcggcgtc 151976

                                                  
Query: 349    gtgagcccgaacacctcgtccatgctcagctgctcc 384
              |  |  ||||| | ||| ||||||||||||||||||
Sbjct: 151975 gacaagccgaagatctcctccatgctcagctgctcc 151940



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 92/113 (81%)
 Strand = Plus / Minus

                                                                          
Query: 289    tagaggtgagcggggagcttgggctccaacacagcctccagggggaacttgcgcgacgtg 348
              ||||||| ||| |||||||||||||| |  ||| |||| || ||||||||||||| ||| 
Sbjct: 158316 tagaggtcagccgggagcttgggctcgacgacaacctcgagcgggaacttgcgcggcgtc 158257

                                                                   
Query: 349    gtgagcccgaacacctcgtccatgctcagctgctccgccgccattccgtcggg 401
              |  |  ||||| | ||| ||||||||||||||||||  || ||| ||||||||
Sbjct: 158256 gacaaaccgaagatctcctccatgctcagctgctccttcgtcatgccgtcggg 158204
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>dbj|AK111616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107D15, full
            insert sequence
          Length = 1825

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                        
Query: 289  tagaggtgagcggggagcttgggctccaacacagcctccagggggaacttgcgcgacgtg 348
            |||||||||||||| ||||||||||| |  |||||||| || ||||||||||||| ||| 
Sbjct: 1607 tagaggtgagcgggcagcttgggctcgacgacagcctcaagcgggaacttgcgcggcgtc 1548

                                                
Query: 349  gtgagcccgaacacctcgtccatgctcagctgctcc 384
            |  |  ||||| | ||| ||||||||||||||||||
Sbjct: 1547 gacaagccgaagatctcctccatgctcagctgctcc 1512
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>dbj|AK100321.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079F15, full
            insert sequence
          Length = 3587

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                        
Query: 289  tagaggtgagcggggagcttgggctccaacacagcctccagggggaacttgcgcgacgtg 348
            |||||||||||||| ||||||||||| |  |||||||| || ||||||||||||| ||| 
Sbjct: 3370 tagaggtgagcgggcagcttgggctcgacgacagcctcaagcgggaacttgcgcggcgtc 3311

                                                
Query: 349  gtgagcccgaacacctcgtccatgctcagctgctcc 384
            |  |  ||||| | ||| ||||||||||||||||||
Sbjct: 3310 gacaagccgaagatctcctccatgctcagctgctcc 3275
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>ref|XM_482757.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1563

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 352  agcccgaacacctcgtccatgctcagctgctcc 384
            ||||| |||||||||||||||||||||| ||||
Sbjct: 1490 agcccaaacacctcgtccatgctcagctcctcc 1458
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 352      agcccgaacacctcgtccatgctcagctgctcc 384
                ||||| |||||||||||||||||||||| ||||
Sbjct: 22362209 agcccaaacacctcgtccatgctcagctcctcc 22362241
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>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1144B06
          Length = 133689

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 352   agcccgaacacctcgtccatgctcagctgctcc 384
             ||||| |||||||||||||||||||||| ||||
Sbjct: 59192 agcccaaacacctcgtccatgctcagctcctcc 59224
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 221     ggcgagttgttgacgaagcgcgcgca 246
               ||||||||| ||||||||||||||||
Sbjct: 3986987 ggcgagttgctgacgaagcgcgcgca 3986962
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>emb|CR382287.6| Human DNA sequence from clone bP-21216K13 on chromosome 21, complete
              sequence
          Length = 278310

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 163    tggagataacattaatgaaatt 184
              ||||||||||||||||||||||
Sbjct: 250852 tggagataacattaatgaaatt 250873
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>emb|AL627122.18| Mouse DNA sequence from clone RP23-132E8 on chromosome 4, complete
              sequence
          Length = 166814

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 163    tggagataacattaatgaaatt 184
              ||||||||||||||||||||||
Sbjct: 141381 tggagataacattaatgaaatt 141402
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>ref|XM_465852.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1614

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 354  cccgaacacctcgtccatgctcagctgctccgccgcc 390
            |||||||  ||| ||||||||||||| ||||||||||
Sbjct: 1539 cccgaacttctcctccatgctcagctcctccgccgcc 1503
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>gb|AC165370.4| Mus musculus BAC clone RP23-2N3 from chromosome 10, complete sequence
          Length = 219653

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 147    aaacattttgaaagtatggag 167
              |||||||||||||||||||||
Sbjct: 156604 aaacattttgaaagtatggag 156624
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>emb|AL157396.9| Human DNA sequence from clone RP11-437J2 on chromosome 10 Contains the 3'
              end of the PDE6C gene for phosphodiesterase 6C,
              cGMP-specific, cone, alpha prime (PDEA2), the C10orf4 gene
              for chromosome 10 open reading frame 4 and the 5' end of
              the LGI1 gene for leucine-rich glioma inactivated 1,
              complete sequence
          Length = 128796

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 46     aaagaaacaggccttatttacttta 70
              ||||||| |||||||||||||||||
Sbjct: 119552 aaagaaaaaggccttatttacttta 119576
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>gb|AC156039.4| Mus musculus BAC clone RP23-24C2 from chromosome 10, complete sequence
          Length = 206634

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 147   aaacattttgaaagtatggag 167
             |||||||||||||||||||||
Sbjct: 91279 aaacattttgaaagtatggag 91299
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>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome
          Length = 2694756

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 161     tatggagataacattaatgaaattg 185
               ||||||||||||||| |||||||||
Sbjct: 1155232 tatggagataacattgatgaaattg 1155256
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>gb|AC080043.5| Homo sapiens chromosome , clone RP11-45M9, complete sequence
          Length = 161443

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 168   ataacattaatgaaattgttt 188
             |||||||||||||||||||||
Sbjct: 49541 ataacattaatgaaattgttt 49521
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>gb|AC023566.11| Homo sapiens chromosome 8, clone RP11-660D5, complete sequence
          Length = 184543

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 168   ataacattaatgaaattgttt 188
             |||||||||||||||||||||
Sbjct: 99097 ataacattaatgaaattgttt 99077
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 348      ggtgagcccgaacacctcgtccatg 372
                ||||||||||||||| |||||||||
Sbjct: 13993807 ggtgagcccgaacacgtcgtccatg 13993831
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 354      cccgaacacctcgtccatgctcagctgctccgccgcc 390
                |||||||  ||| ||||||||||||| ||||||||||
Sbjct: 17908565 cccgaacttctcctccatgctcagctcctccgccgcc 17908529
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>dbj|AP005688.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0031J07
          Length = 172511

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 348    ggtgagcccgaacacctcgtccatg 372
              ||||||||||||||| |||||||||
Sbjct: 111027 ggtgagcccgaacacgtcgtccatg 111051
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>dbj|AP006446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1097H10
          Length = 159732

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 347   tggtgagcccgaacacctcgtccatgctcagct 379
             ||||||||||||| | ||| |||||||||||||
Sbjct: 39320 tggtgagcccgaagatctcctccatgctcagct 39352



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 347 tggtgagcccgaacacctcgtccatgctcagct 379
           ||||||||||||| | ||| |||||||||||||
Sbjct: 745 tggtgagcccgaagatctcttccatgctcagct 777
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>dbj|AP006176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0681H07
          Length = 144722

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 347    tggtgagcccgaacacctcgtccatgctcagct 379
              ||||||||||||| | ||| |||||||||||||
Sbjct: 136010 tggtgagcccgaagatctcttccatgctcagct 136042
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>dbj|AP004022.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1126_B06
          Length = 99637

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 354   cccgaacacctcgtccatgctcagctgctccgccgcc 390
             |||||||  ||| ||||||||||||| ||||||||||
Sbjct: 43198 cccgaacttctcctccatgctcagctcctccgccgcc 43162
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>dbj|AP005069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0654A08
          Length = 154812

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 354    cccgaacacctcgtccatgctcagctgctccgccgcc 390
              |||||||  ||| ||||||||||||| ||||||||||
Sbjct: 148096 cccgaacttctcctccatgctcagctcctccgccgcc 148060
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>emb|BX648839.1|HSM808990 Homo sapiens mRNA; cDNA DKFZp686D0944 (from clone DKFZp686D0944)
          Length = 8426

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 46   aaagaaacaggccttatttacttta 70
            ||||||| |||||||||||||||||
Sbjct: 3702 aaagaaaaaggccttatttacttta 3726
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>dbj|AK100987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145F09, full
            insert sequence
          Length = 1897

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 347  tggtgagcccgaacacctcgtccatgctcagct 379
            ||||||||||||| | ||| |||||||||||||
Sbjct: 1520 tggtgagcccgaagatctcctccatgctcagct 1488
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>dbj|AP003462.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-480C22, complete
             sequences
          Length = 190032

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cagacgtcaagtaaagaaaca 54
             |||||||||||||||||||||
Sbjct: 56390 cagacgtcaagtaaagaaaca 56370
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>gb|AC133944.4| Mus musculus BAC clone RP24-113L10 from 10, complete sequence
          Length = 167418

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 147    aaacattttgaaagtatggag 167
              |||||||||||||||||||||
Sbjct: 157796 aaacattttgaaagtatggag 157776
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 13      ttttctaaagatacagcaca 32
               ||||||||||||||||||||
Sbjct: 3044184 ttttctaaagatacagcaca 3044203
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>gb|AC027119.5| Homo sapiens chromosome 3 clone RP11-113L10 map 3p, complete sequence
          Length = 175590

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   catgaaacattttgaaagta 162
             ||||||||||||||||||||
Sbjct: 76352 catgaaacattttgaaagta 76333
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>emb|CR759774.13| Zebrafish DNA sequence from clone CH211-147P17 in linkage group 18,
             complete sequence
          Length = 149156

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    taaagaaacaggccttattt 64
             ||||||||||||||||||||
Sbjct: 83304 taaagaaacaggccttattt 83323
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 13      ttttctaaagatacagcaca 32
               ||||||||||||||||||||
Sbjct: 3029117 ttttctaaagatacagcaca 3029136
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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 166     agataacattaatgaaattg 185
               ||||||||||||||||||||
Sbjct: 1009823 agataacattaatgaaattg 1009804
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>emb|AL035699.4|HS73H22 Human DNA sequence from clone RP1-73H22 on chromosome 6q23 Contains the
             TBPL1 gene for TBP-like 1, the 3' part of the SLC2A12 gene
             for solute carrier family 2 (facilitated glucose
             transporter) member 12 and one CpG island, complete
             sequence
          Length = 104824

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   ttttgaaagtatggagataa 171
             ||||||||||||||||||||
Sbjct: 63182 ttttgaaagtatggagataa 63201
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>emb|Z80904.1|CICOS1 Ciona intestinalis DNA sequence from cosmid COS1
          Length = 37148

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 247  tgaatgaatcaaccatccaacacc 270
            |||||||||| |||||||||||||
Sbjct: 2649 tgaatgaatccaccatccaacacc 2672
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>emb|CR931740.2| Medicago truncatula chromosome 5 clone mth2-67g10, COMPLETE SEQUENCE
          Length = 153273

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 254  atcaaccatccaacaccatg 273
            ||||||||||||||||||||
Sbjct: 2291 atcaaccatccaacaccatg 2310
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>gb|AC016383.11| Homo sapiens chromosome 18, clone RP11-25O3, complete sequence
          Length = 178624

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 9     tatattttctaaagatacagcaca 32
             |||| |||||||||||||||||||
Sbjct: 95488 tatagtttctaaagatacagcaca 95465
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>gb|AC010735.11| Homo sapiens BAC clone RP11-395N3 from 2, complete sequence
          Length = 211980

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   cttgggctccaacacagcct 325
             ||||||||||||||||||||
Sbjct: 69836 cttgggctccaacacagcct 69817
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>gb|AC154119.8| Mus musculus chromosome 1, clone RP24-103A6, complete sequence
          Length = 159230

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   gataacattaatgaaattgt 186
             ||||||||||||||||||||
Sbjct: 39561 gataacattaatgaaattgt 39580
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>emb|BX957233.8| Zebrafish DNA sequence from clone DKEY-224H10 in linkage group 18,
             complete sequence
          Length = 68884

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    taaagaaacaggccttattt 64
             ||||||||||||||||||||
Sbjct: 65883 taaagaaacaggccttattt 65864
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>gb|AC113964.18| Mus musculus chromosome 16, clone RP23-31O16, complete sequence
          Length = 213851

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   tattacatgaaacattttga 157
             ||||||||||||||||||||
Sbjct: 27175 tattacatgaaacattttga 27194
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 13      ttttctaaagatacagcaca 32
               ||||||||||||||||||||
Sbjct: 3123711 ttttctaaagatacagcaca 3123730
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>gb|AC087276.13| Homo sapiens chromosome 11, clone RP11-484D2, complete sequence
          Length = 204109

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    ttattacatgaaacattttg 156
              ||||||||||||||||||||
Sbjct: 175592 ttattacatgaaacattttg 175573


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,491,762
Number of Sequences: 3902068
Number of extensions: 3491762
Number of successful extensions: 81808
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81521
Number of HSP's gapped (non-prelim): 279
length of query: 401
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 379
effective length of database: 17,147,199,772
effective search space: 6498788713588
effective search space used: 6498788713588
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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