ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet21h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469842.1| Oryza sativa (japonica cultivar-group), mRNA 123 4e-25
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 123 4e-25
3gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosom... 123 4e-25
4gb|AY341852.1| Oryza sativa (japonica cultivar-group) WRKY11 mRN... 123 4e-25
5gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genom... 123 4e-25
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 123 4e-25
7emb|AL137348.1|HSM802033 Homo sapiens mRNA; cDNA DKFZp761E1312 (... 44 0.32
8emb|CR627376.1| Homo sapiens mRNA; cDNA DKFZp686M05248 (from clo... 44 0.32
9ref|NM_015713.3| Homo sapiens ribonucleotide reductase M2 B (TP5... 44 0.32
10emb|CR617553.1| full-length cDNA clone CS0DI011YF14 of Placenta ... 44 0.32
11dbj|AK023605.1| Homo sapiens cDNA FLJ13543 fis, clone PLACE1006805 44 0.32
12gb|AC009708.11| Homo sapiens chromosome 8, clone RP11-318G5, com... 44 0.32
13gb|BC042948.2| Homo sapiens cDNA clone IMAGE:4798175, containing... 44 0.32
14gb|DQ027001.1| Homo sapiens ribonucleotide reductase M2 B (TP53 ... 44 0.32
15dbj|AB036532.2| Homo sapiens p53R2 gene for ribonucleotide reduc... 44 0.32
16gb|BC042468.1| Homo sapiens, Similar to ribonucleotide reductase... 44 0.32
17dbj|AP003398.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 44 0.32
18gb|BC108261.1| Homo sapiens ribonucleotide reductase M2 B (TP53 ... 44 0.32
19dbj|AP001328.3| Homo sapiens genomic DNA, chromosome 8q23, clone... 44 0.32
20dbj|AP002907.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 44 0.32
21dbj|AB036063.1| Homo sapiens p53R2 mRNA for ribonucleotide reduc... 44 0.32
22gb|AC121313.8| Mus musculus chromosome 14, clone RP24-395N22, co... 42 1.3
23emb|AL021917.4|HS45P21 Human DNA sequence from clone RP1-45P21 o... 42 1.3
24emb|AL844516.17| Mouse DNA sequence from clone RP23-367O15 on ch... 42 1.3
25gb|AE014850.1| Plasmodium falciparum 3D7 chromosome 12, section ... 40 5.0
26gb|AC101713.7| Mus musculus chromosome 15, clone RP23-282L9, com... 40 5.0
27gb|AC121611.3| Mus musculus BAC clone RP23-330I2 from chromosome... 40 5.0
28gb|AC073182.4| Homo sapiens BAC clone CTD-2012B24 from 7, comple... 40 5.0
29gb|AC149636.14| Medicago truncatula clone mth2-180a12, complete ... 40 5.0
30emb|BX004881.17| Zebrafish DNA sequence from clone CH211-141M16 ... 40 5.0
31gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5... 40 5.0
32emb|Z99707.1|ATAP21 Arabidopsis thaliana DNA chromosome 4, ESSA ... 40 5.0
33emb|CR382400.1| Plasmodium falciparum chromosome 6, complete seq... 40 5.0
34emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosome 4, ... 40 5.0
35gb|AC161347.2| Mus musculus chromosome 15, clone RP23-273M5, com... 40 5.0
36emb|BX324131.6| Zebrafish DNA sequence from clone CH211-119E14 i... 40 5.0
37gb|AC011517.7| Homo sapiens chromosome 19 clone LLNLF-175A7, com... 40 5.0
38gb|AC025265.21| Homo sapiens 12 BAC RP11-341G23 (Roswell Park Ca... 40 5.0
39gb|AC138064.14| Pan troglodytes clone rp43-10k8, complete sequence 40 5.0
40gb|AC175319.3| Pan troglodytes BAC clone CH251-258C23 from chrom... 40 5.0
41gb|AC022024.7| Homo sapiens chromosome 10 clone RP11-432B10, com... 40 5.0
42gb|AC079995.5| Homo sapiens BAC clone RP11-629N4 from 4, complet... 40 5.0
43ref|XM_690221.1| PREDICTED: Danio rerio similar to cohesin subun... 40 5.0
44ref|XM_703435.1| PREDICTED: Danio rerio similar to stromal antig... 40 5.0
45ref|XM_703434.1| PREDICTED: Danio rerio similar to stromal antig... 40 5.0
46ref|XM_703433.1| PREDICTED: Danio rerio similar to stromal antig... 40 5.0
47ref|XM_681720.1| PREDICTED: Danio rerio similar to stromal antig... 40 5.0
48emb|BX649439.8| Zebrafish DNA sequence from clone DKEY-21A8 in l... 40 5.0
49gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 40 5.0
50gb|AF250284.1|AF250284 Amsacta moorei entomopoxvirus, complete g... 40 5.0
51gb|AC174869.2| Pan troglodytes BAC clone CH251-558A1 from chromo... 40 5.0
52emb|CR556724.7| Zebrafish DNA sequence from clone DKEYP-34A8 in ... 40 5.0
53emb|BX572629.8| Zebrafish DNA sequence from clone CH211-195L15 i... 40 5.0
54emb|BX649503.3| Zebrafish DNA sequence from clone DKEYP-90A8 in ... 40 5.0
55emb|BX005064.4| Zebrafish DNA sequence from clone CH211-134N17 i... 40 5.0
56gb|AY319946.2| Pseudomonas putida strain DSM 3601 pyridine-2,6-b... 40 5.0
57emb|BX088535.6| Zebrafish DNA sequence from clone DKEY-18F5 in l... 40 5.0
58emb|AL844545.7| Mouse DNA sequence from clone RP23-383C3 on chro... 40 5.0
59gb|AC171905.2| Capitella capitata clone JGIBGZA-5C11, complete s... 40 5.0
60emb|CR626891.17| Zebrafish DNA sequence from clone DKEY-33P20 in... 40 5.0 
>ref|XM_469842.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1218

 Score =  123 bits (62), Expect = 4e-25
 Identities = 92/102 (90%)
 Strand = Plus / Minus

                                                                        
Query: 274  gatgtctgatggatatcccatgtacatccctccaggtagcaaagtaatctcatatcctcc 333
            ||||||||  ||||||||||||||||| |||||||||| ||| || || |||||||||||
Sbjct: 1074 gatgtctgtcggatatcccatgtacattcctccaggtaacaaggtcatttcatatcctcc 1015

                                                      
Query: 334  atcaaactgaagcaagttgttattcgctattcctgtccagtg 375
            |||||||||||||||||||||||| |||  ||||||||||||
Sbjct: 1014 atcaaactgaagcaagttgttatttgctgatcctgtccagtg 973



 Score =  101 bits (51), Expect = 2e-18
 Identities = 102/119 (85%)
 Strand = Plus / Minus

                                                                        
Query: 130  tcatactctggtctctatgaagtaggtcgacgaaacagccagaccagccgagtcgaaggt 189
            ||||||| | ||||| | |||||| || || |||||||||| |||||| |||||  | ||
Sbjct: 1218 tcatactttagtctcaaagaagtaagttgatgaaacagccaaaccagctgagtcataagt 1159

                                                                       
Query: 190  ccgcacaagccgctgcctttttcctggcgattccatccaacaaaactccaaattaaaag 248
            |||||||||||||||||| |||||||| ||||||||||| || |||||||||| |||||
Sbjct: 1158 ccgcacaagccgctgcctctttcctggtgattccatccagcagaactccaaatgaaaag 1100
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  123 bits (62), Expect = 4e-25
 Identities = 92/102 (90%)
 Strand = Plus / Minus

                                                                            
Query: 274      gatgtctgatggatatcccatgtacatccctccaggtagcaaagtaatctcatatcctcc 333
                ||||||||  ||||||||||||||||| |||||||||| ||| || || |||||||||||
Sbjct: 31089640 gatgtctgtcggatatcccatgtacattcctccaggtaacaaggtcatttcatatcctcc 31089581

                                                          
Query: 334      atcaaactgaagcaagttgttattcgctattcctgtccagtg 375
                |||||||||||||||||||||||| |||  ||||||||||||
Sbjct: 31089580 atcaaactgaagcaagttgttatttgctgatcctgtccagtg 31089539



 Score =  101 bits (51), Expect = 2e-18
 Identities = 102/119 (85%)
 Strand = Plus / Minus

                                                                            
Query: 130      tcatactctggtctctatgaagtaggtcgacgaaacagccagaccagccgagtcgaaggt 189
                ||||||| | ||||| | |||||| || || |||||||||| |||||| |||||  | ||
Sbjct: 31089784 tcatactttagtctcaaagaagtaagttgatgaaacagccaaaccagctgagtcataagt 31089725

                                                                           
Query: 190      ccgcacaagccgctgcctttttcctggcgattccatccaacaaaactccaaattaaaag 248
                |||||||||||||||||| |||||||| ||||||||||| || |||||||||| |||||
Sbjct: 31089724 ccgcacaagccgctgcctctttcctggtgattccatccagcagaactccaaatgaaaag 31089666
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>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01
            genomic sequence, complete sequence
          Length = 168759

 Score =  123 bits (62), Expect = 4e-25
 Identities = 92/102 (90%)
 Strand = Plus / Plus

                                                                        
Query: 274  gatgtctgatggatatcccatgtacatccctccaggtagcaaagtaatctcatatcctcc 333
            ||||||||  ||||||||||||||||| |||||||||| ||| || || |||||||||||
Sbjct: 6424 gatgtctgtcggatatcccatgtacattcctccaggtaacaaggtcatttcatatcctcc 6483

                                                      
Query: 334  atcaaactgaagcaagttgttattcgctattcctgtccagtg 375
            |||||||||||||||||||||||| |||  ||||||||||||
Sbjct: 6484 atcaaactgaagcaagttgttatttgctgatcctgtccagtg 6525



 Score =  101 bits (51), Expect = 2e-18
 Identities = 102/119 (85%)
 Strand = Plus / Plus

                                                                        
Query: 130  tcatactctggtctctatgaagtaggtcgacgaaacagccagaccagccgagtcgaaggt 189
            ||||||| | ||||| | |||||| || || |||||||||| |||||| |||||  | ||
Sbjct: 6280 tcatactttagtctcaaagaagtaagttgatgaaacagccaaaccagctgagtcataagt 6339

                                                                       
Query: 190  ccgcacaagccgctgcctttttcctggcgattccatccaacaaaactccaaattaaaag 248
            |||||||||||||||||| |||||||| ||||||||||| || |||||||||| |||||
Sbjct: 6340 ccgcacaagccgctgcctctttcctggtgattccatccagcagaactccaaatgaaaag 6398
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>gb|AY341852.1| Oryza sativa (japonica cultivar-group) WRKY11 mRNA, complete cds
          Length = 3276

 Score =  123 bits (62), Expect = 4e-25
 Identities = 92/102 (90%)
 Strand = Plus / Minus

                                                                        
Query: 274  gatgtctgatggatatcccatgtacatccctccaggtagcaaagtaatctcatatcctcc 333
            ||||||||  ||||||||||||||||| |||||||||| ||| || || |||||||||||
Sbjct: 1263 gatgtctgtcggatatcccatgtacattcctccaggtaacaaggtcatttcatatcctcc 1204

                                                      
Query: 334  atcaaactgaagcaagttgttattcgctattcctgtccagtg 375
            |||||||||||||||||||||||| |||  ||||||||||||
Sbjct: 1203 atcaaactgaagcaagttgttatttgctgatcctgtccagtg 1162



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                        
Query: 148  gaagtaggtcgacgaaacagccagaccagccgagtcgaaggtccgcacaagccgctgcct 207
            |||||| || || |||||||||| |||||| |||||  | ||||||||||||||||||||
Sbjct: 1389 gaagtaagttgatgaaacagccaaaccagctgagtcataagtccgcacaagccgctgcct 1330

                                                     
Query: 208  ttttcctggcgattccatccaacaaaactccaaattaaaag 248
             |||||||| ||||||||||| || |||||||||| |||||
Sbjct: 1329 ctttcctggtgattccatccagcagaactccaaatgaaaag 1289
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>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete
             sequence
          Length = 128017

 Score =  123 bits (62), Expect = 4e-25
 Identities = 92/102 (90%)
 Strand = Plus / Minus

                                                                         
Query: 274   gatgtctgatggatatcccatgtacatccctccaggtagcaaagtaatctcatatcctcc 333
             ||||||||  ||||||||||||||||| |||||||||| ||| || || |||||||||||
Sbjct: 10281 gatgtctgtcggatatcccatgtacattcctccaggtaacaaggtcatttcatatcctcc 10222

                                                       
Query: 334   atcaaactgaagcaagttgttattcgctattcctgtccagtg 375
             |||||||||||||||||||||||| |||  ||||||||||||
Sbjct: 10221 atcaaactgaagcaagttgttatttgctgatcctgtccagtg 10180



 Score =  101 bits (51), Expect = 2e-18
 Identities = 102/119 (85%)
 Strand = Plus / Minus

                                                                         
Query: 130   tcatactctggtctctatgaagtaggtcgacgaaacagccagaccagccgagtcgaaggt 189
             ||||||| | ||||| | |||||| || || |||||||||| |||||| |||||  | ||
Sbjct: 10425 tcatactttagtctcaaagaagtaagttgatgaaacagccaaaccagctgagtcataagt 10366

                                                                        
Query: 190   ccgcacaagccgctgcctttttcctggcgattccatccaacaaaactccaaattaaaag 248
             |||||||||||||||||| |||||||| ||||||||||| || |||||||||| |||||
Sbjct: 10365 ccgcacaagccgctgcctctttcctggtgattccatccagcagaactccaaatgaaaag 10307
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  123 bits (62), Expect = 4e-25
 Identities = 92/102 (90%)
 Strand = Plus / Minus

                                                                            
Query: 274      gatgtctgatggatatcccatgtacatccctccaggtagcaaagtaatctcatatcctcc 333
                ||||||||  ||||||||||||||||| |||||||||| ||| || || |||||||||||
Sbjct: 31180163 gatgtctgtcggatatcccatgtacattcctccaggtaacaaggtcatttcatatcctcc 31180104

                                                          
Query: 334      atcaaactgaagcaagttgttattcgctattcctgtccagtg 375
                |||||||||||||||||||||||| |||  ||||||||||||
Sbjct: 31180103 atcaaactgaagcaagttgttatttgctgatcctgtccagtg 31180062



 Score =  101 bits (51), Expect = 2e-18
 Identities = 102/119 (85%)
 Strand = Plus / Minus

                                                                            
Query: 130      tcatactctggtctctatgaagtaggtcgacgaaacagccagaccagccgagtcgaaggt 189
                ||||||| | ||||| | |||||| || || |||||||||| |||||| |||||  | ||
Sbjct: 31180307 tcatactttagtctcaaagaagtaagttgatgaaacagccaaaccagctgagtcataagt 31180248

                                                                           
Query: 190      ccgcacaagccgctgcctttttcctggcgattccatccaacaaaactccaaattaaaag 248
                |||||||||||||||||| |||||||| ||||||||||| || |||||||||| |||||
Sbjct: 31180247 ccgcacaagccgctgcctctttcctggtgattccatccagcagaactccaaatgaaaag 31180189
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>emb|AL137348.1|HSM802033 Homo sapiens mRNA; cDNA DKFZp761E1312 (from clone DKFZp761E1312)
          Length = 4748

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 5    aaatatatatattaaagtatca 26
            ||||||||||||||||||||||
Sbjct: 3085 aaatatatatattaaagtatca 3106
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>emb|CR627376.1| Homo sapiens mRNA; cDNA DKFZp686M05248 (from clone DKFZp686M05248)
          Length = 3501

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 5    aaatatatatattaaagtatca 26
            ||||||||||||||||||||||
Sbjct: 2954 aaatatatatattaaagtatca 2975
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>ref|NM_015713.3| Homo sapiens ribonucleotide reductase M2 B (TP53 inducible) (RRM2B),
            mRNA
          Length = 4955

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 5    aaatatatatattaaagtatca 26
            ||||||||||||||||||||||
Sbjct: 3279 aaatatatatattaaagtatca 3300
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>emb|CR617553.1| full-length cDNA clone CS0DI011YF14 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 3292

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 5    aaatatatatattaaagtatca 26
            ||||||||||||||||||||||
Sbjct: 3061 aaatatatatattaaagtatca 3082
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>dbj|AK023605.1| Homo sapiens cDNA FLJ13543 fis, clone PLACE1006805
          Length = 2067

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 5   aaatatatatattaaagtatca 26
           ||||||||||||||||||||||
Sbjct: 414 aaatatatatattaaagtatca 435
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>gb|AC009708.11| Homo sapiens chromosome 8, clone RP11-318G5, complete sequence
          Length = 220215

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 5     aaatatatatattaaagtatca 26
             ||||||||||||||||||||||
Sbjct: 91862 aaatatatatattaaagtatca 91883
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>gb|BC042948.2| Homo sapiens cDNA clone IMAGE:4798175, containing frame-shift errors
          Length = 4650

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 5    aaatatatatattaaagtatca 26
            ||||||||||||||||||||||
Sbjct: 3107 aaatatatatattaaagtatca 3128
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>gb|DQ027001.1| Homo sapiens ribonucleotide reductase M2 B (TP53 inducible) (RRM2B)
             gene, complete cds
          Length = 37983

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 5     aaatatatatattaaagtatca 26
             ||||||||||||||||||||||
Sbjct: 34738 aaatatatatattaaagtatca 34759
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>dbj|AB036532.2| Homo sapiens p53R2 gene for ribonucleotide reductase, complete cds
          Length = 6213

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 5    aaatatatatattaaagtatca 26
            ||||||||||||||||||||||
Sbjct: 4560 aaatatatatattaaagtatca 4581
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>gb|BC042468.1| Homo sapiens, Similar to ribonucleotide reductase M2 polypeptide,
            clone IMAGE:3866681, mRNA, partial cds
          Length = 4571

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 5    aaatatatatattaaagtatca 26
            ||||||||||||||||||||||
Sbjct: 2837 aaatatatatattaaagtatca 2858
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>dbj|AP003398.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-170L9, complete
            sequence
          Length = 156829

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 92   attacattttgtacaaagaaaa 113
            ||||||||||||||||||||||
Sbjct: 5369 attacattttgtacaaagaaaa 5390
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>gb|BC108261.1| Homo sapiens ribonucleotide reductase M2 B (TP53 inducible), mRNA
            (cDNA clone MGC:102856 IMAGE:6143754), complete cds
          Length = 3179

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 5    aaatatatatattaaagtatca 26
            ||||||||||||||||||||||
Sbjct: 3091 aaatatatatattaaagtatca 3112
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>dbj|AP001328.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1073A2
          Length = 147826

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 5    aaatatatatattaaagtatca 26
            ||||||||||||||||||||||
Sbjct: 4035 aaatatatatattaaagtatca 4056
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>dbj|AP002907.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB431C1
          Length = 98146

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 5     aaatatatatattaaagtatca 26
             ||||||||||||||||||||||
Sbjct: 27731 aaatatatatattaaagtatca 27710
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>dbj|AB036063.1| Homo sapiens p53R2 mRNA for ribonucleotide reductase, complete cds
          Length = 4955

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 5    aaatatatatattaaagtatca 26
            ||||||||||||||||||||||
Sbjct: 3280 aaatatatatattaaagtatca 3301
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>gb|AC121313.8| Mus musculus chromosome 14, clone RP24-395N22, complete sequence
          Length = 131620

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 27    tgtattgaacaaggtatcaca 47
             |||||||||||||||||||||
Sbjct: 45071 tgtattgaacaaggtatcaca 45051
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>emb|AL021917.4|HS45P21 Human DNA sequence from clone RP1-45P21 on chromosome 6p21.3-22.2
             Contains the H4FA gene for H4 histone family member A, a
             histone H3 pseudogene, the BTN3A2, BTN2A2, BTN3A1, BTN2A3
             and BTN3A3 genes for butyrophilins 3A1, 2 and 3 and 2A2
             and 3. Contains ESTs, STSs, GSSs and CpG islands, complete
             sequence
          Length = 170001

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 13    atattaaagtatcatgtattg 33
             |||||||||||||||||||||
Sbjct: 45570 atattaaagtatcatgtattg 45550
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>emb|AL844516.17| Mouse DNA sequence from clone RP23-367O15 on chromosome 2, complete
              sequence
          Length = 142037

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 115    ctctgactcactcactcatac 135
              |||||||||||||||||||||
Sbjct: 106172 ctctgactcactcactcatac 106152
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>gb|AE014850.1| Plasmodium falciparum 3D7 chromosome 12, section 7 of 9 of the complete
             sequence
          Length = 250713

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     aaatatatatattaaagtat 24
             ||||||||||||||||||||
Sbjct: 63086 aaatatatatattaaagtat 63105
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>gb|AC101713.7| Mus musculus chromosome 15, clone RP23-282L9, complete sequence
          Length = 189145

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 109    gaaaagctctgactcactcactca 132
              |||||||| |||||||||||||||
Sbjct: 164441 gaaaagctttgactcactcactca 164418
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>gb|AC121611.3| Mus musculus BAC clone RP23-330I2 from chromosome 6, complete sequence
          Length = 197889

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     gacaaatatatatattaaag 21
             ||||||||||||||||||||
Sbjct: 68711 gacaaatatatatattaaag 68692
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>gb|AC073182.4| Homo sapiens BAC clone CTD-2012B24 from 7, complete sequence
          Length = 122912

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      acaaatatatatattaaagt 22
              ||||||||||||||||||||
Sbjct: 106072 acaaatatatatattaaagt 106091
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>gb|AC149636.14| Medicago truncatula clone mth2-180a12, complete sequence
          Length = 139348

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 65    tactggaaagctcacaaaaattgg 88
             ||||| ||||||||||||||||||
Sbjct: 57661 tactgcaaagctcacaaaaattgg 57684
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>emb|BX004881.17| Zebrafish DNA sequence from clone CH211-141M16 in linkage group 13,
             complete sequence
          Length = 189908

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   actcactcactcatactctg 139
             ||||||||||||||||||||
Sbjct: 45425 actcactcactcatactctg 45444
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>gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5 of 13 of the complete
              sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 93     ttacattttgtacaaagaaa 112
              ||||||||||||||||||||
Sbjct: 227694 ttacattttgtacaaagaaa 227713
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>emb|Z99707.1|ATAP21 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 1
          Length = 206420

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   aaactccaaattaaaaggat 251
             ||||||||||||||||||||
Sbjct: 69285 aaactccaaattaaaaggat 69304
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>emb|CR382400.1| Plasmodium falciparum chromosome 6, complete sequence; segment 3/5
          Length = 348034

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 5    aaatatatatattaaagtat 24
            ||||||||||||||||||||
Sbjct: 8991 aaatatatatattaaagtat 9010
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>emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 86
          Length = 198780

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 232    aaactccaaattaaaaggat 251
              ||||||||||||||||||||
Sbjct: 185949 aaactccaaattaaaaggat 185930
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>gb|AC161347.2| Mus musculus chromosome 15, clone RP23-273M5, complete sequence
          Length = 191833

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 109  gaaaagctctgactcactcactca 132
            |||||||| |||||||||||||||
Sbjct: 9857 gaaaagctttgactcactcactca 9834
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>emb|BX324131.6| Zebrafish DNA sequence from clone CH211-119E14 in linkage group 7,
              complete sequence
          Length = 198318

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      agacaaatatatatattaaa 20
              ||||||||||||||||||||
Sbjct: 157205 agacaaatatatatattaaa 157224
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>gb|AC011517.7| Homo sapiens chromosome 19 clone LLNLF-175A7, complete sequence
          Length = 38081

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   aacaaaactccaaattaaaa 247
             ||||||||||||||||||||
Sbjct: 18316 aacaaaactccaaattaaaa 18297
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>gb|AC025265.21| Homo sapiens 12 BAC RP11-341G23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 180064

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     aaatatatatattaaagtat 24
             ||||||||||||||||||||
Sbjct: 16699 aaatatatatattaaagtat 16680
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>gb|AC138064.14| Pan troglodytes clone rp43-10k8, complete sequence
          Length = 168095

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    aacaaggtatcacaacacta 53
             ||||||||||||||||||||
Sbjct: 10172 aacaaggtatcacaacacta 10191
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>gb|AC175319.3| Pan troglodytes BAC clone CH251-258C23 from chromosome unknown, complete
              sequence
          Length = 157271

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 7      atatatatattaaagtatcatgta 30
              |||||||||||||||| |||||||
Sbjct: 114815 atatatatattaaagtttcatgta 114792
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>gb|AC022024.7| Homo sapiens chromosome 10 clone RP11-432B10, complete sequence
          Length = 168862

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    tactggaaagctcacaaaaa 84
             ||||||||||||||||||||
Sbjct: 79488 tactggaaagctcacaaaaa 79507
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>gb|AC079995.5| Homo sapiens BAC clone RP11-629N4 from 4, complete sequence
          Length = 189714

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 7      atatatatattaaagtatcatgta 30
              |||||||||||||||| |||||||
Sbjct: 112934 atatatatattaaagtttcatgta 112957
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>ref|XM_690221.1| PREDICTED: Danio rerio similar to cohesin subunit XSA2 (LOC566935),
           mRNA
          Length = 1984

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 5   aaatatatatattaaagtat 24
           ||||||||||||||||||||
Sbjct: 895 aaatatatatattaaagtat 914
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>ref|XM_703435.1| PREDICTED: Danio rerio similar to stromal antigen 2, transcript
            variant 5 (LOC560751), mRNA
          Length = 5326

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 5    aaatatatatattaaagtat 24
            ||||||||||||||||||||
Sbjct: 4244 aaatatatatattaaagtat 4263
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>ref|XM_703434.1| PREDICTED: Danio rerio similar to stromal antigen 2, transcript
            variant 4 (LOC560751), mRNA
          Length = 5326

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 5    aaatatatatattaaagtat 24
            ||||||||||||||||||||
Sbjct: 4244 aaatatatatattaaagtat 4263
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>ref|XM_703433.1| PREDICTED: Danio rerio similar to stromal antigen 2, transcript
            variant 3 (LOC560751), mRNA
          Length = 4954

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 5    aaatatatatattaaagtat 24
            ||||||||||||||||||||
Sbjct: 3872 aaatatatatattaaagtat 3891
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>ref|XM_681720.1| PREDICTED: Danio rerio similar to stromal antigen 2, transcript
            variant 1 (LOC560751), mRNA
          Length = 5422

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 5    aaatatatatattaaagtat 24
            ||||||||||||||||||||
Sbjct: 4340 aaatatatatattaaagtat 4359
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>emb|BX649439.8| Zebrafish DNA sequence from clone DKEY-21A8 in linkage group 2,
             complete sequence
          Length = 146298

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    ttacattttgtacaaagaaa 112
             ||||||||||||||||||||
Sbjct: 86549 ttacattttgtacaaagaaa 86530
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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 14      tattaaagtatcatgtattgaaca 37
               |||| |||||||||||||||||||
Sbjct: 3400980 tattgaagtatcatgtattgaaca 3400957
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>gb|AF250284.1|AF250284 Amsacta moorei entomopoxvirus, complete genome
          Length = 232392

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      aaatatatatattaaagtat 24
              ||||||||||||||||||||
Sbjct: 217770 aaatatatatattaaagtat 217789
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>gb|AC174869.2| Pan troglodytes BAC clone CH251-558A1 from chromosome unknown, complete
             sequence
          Length = 197281

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 7     atatatatattaaagtatcatgta 30
             |||||||||||||||| |||||||
Sbjct: 10599 atatatatattaaagtttcatgta 10576
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>emb|CR556724.7| Zebrafish DNA sequence from clone DKEYP-34A8 in linkage group 13,
             complete sequence
          Length = 42660

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   actcactcactcatactctg 139
             ||||||||||||||||||||
Sbjct: 34997 actcactcactcatactctg 34978
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>emb|BX572629.8| Zebrafish DNA sequence from clone CH211-195L15 in linkage group 19,
             complete sequence
          Length = 170971

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     aaatatatatattaaagtat 24
             ||||||||||||||||||||
Sbjct: 54162 aaatatatatattaaagtat 54143
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>emb|BX649503.3| Zebrafish DNA sequence from clone DKEYP-90A8 in linkage group 4,
             complete sequence
          Length = 189355

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 4     caaatatatatattaaagtatcat 27
             |||| |||||||||||||||||||
Sbjct: 94951 caaacatatatattaaagtatcat 94974
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>emb|BX005064.4| Zebrafish DNA sequence from clone CH211-134N17 in linkage group 19,
              complete sequence
          Length = 134157

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      aaatatatatattaaagtat 24
              ||||||||||||||||||||
Sbjct: 103546 aaatatatatattaaagtat 103565
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>gb|AY319946.2| Pseudomonas putida strain DSM 3601 pyridine-2,6-bis(monothiocarboxylic
             acid) biosynthesis gene locus, complete sequence; and
             flanking regions
          Length = 51968

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   atgaagtaggtcgacgaaac 165
             ||||||||||||||||||||
Sbjct: 42535 atgaagtaggtcgacgaaac 42516
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>emb|BX088535.6| Zebrafish DNA sequence from clone DKEY-18F5 in linkage group 14,
             complete sequence
          Length = 197465

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     aaatatatatattaaagtat 24
             ||||||||||||||||||||
Sbjct: 73639 aaatatatatattaaagtat 73658
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>emb|AL844545.7| Mouse DNA sequence from clone RP23-383C3 on chromosome 2, complete
             sequence
          Length = 120913

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   ccaacaaaactccaaattaa 245
             ||||||||||||||||||||
Sbjct: 30035 ccaacaaaactccaaattaa 30016
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>gb|AC171905.2| Capitella capitata clone JGIBGZA-5C11, complete sequence
          Length = 38416

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   tccaacaaaactccaaatta 244
             ||||||||||||||||||||
Sbjct: 27421 tccaacaaaactccaaatta 27402
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>emb|CR626891.17| Zebrafish DNA sequence from clone DKEY-33P20 in linkage group 14,
             complete sequence
          Length = 187607

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     aaatatatatattaaagtat 24
             ||||||||||||||||||||
Sbjct: 37318 aaatatatatattaaagtat 37337


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,497,312
Number of Sequences: 3902068
Number of extensions: 4497312
Number of successful extensions: 103376
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103058
Number of HSP's gapped (non-prelim): 318
length of query: 376
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 354
effective length of database: 17,147,199,772
effective search space: 6070108719288
effective search space used: 6070108719288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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