| Clone Name | rbaet21d08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|BX901942.6| Zebrafish DNA sequence from clone DKEY-121B10 in linkage group 1, complete sequence Length = 166521 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 aatatcatgcagcactaaacc 302 ||||||||||||||||||||| Sbjct: 67817 aatatcatgcagcactaaacc 67837 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 aatatcatgcagcactaaacc 207 ||||||||||||||||||||| Sbjct: 67817 aatatcatgcagcactaaacc 67837
>ref|XM_477217.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3755 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 caaatgtatattgatttaag 48 |||||||||||||||||||| Sbjct: 2430 caaatgtatattgatttaag 2449
>gb|AC125329.4| Mus musculus BAC clone RP23-198F7 from 10, complete sequence Length = 211931 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 agcaaagctcaccccaaatg 34 |||||||||||||||||||| Sbjct: 115364 agcaaagctcaccccaaatg 115383
>gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox cluster, cholinesterase, and COLP5alpha genes, complete sequence Length = 796348 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 aaatgtatattgatttaagc 49 |||||||||||||||||||| Sbjct: 129332 aaatgtatattgatttaagc 129313
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 caaatgtatattgatttaag 48 |||||||||||||||||||| Sbjct: 7787607 caaatgtatattgatttaag 7787588
>emb|BX324157.4| Zebrafish DNA sequence from clone DKEY-15N1 in linkage group 3, complete sequence Length = 272769 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 aaatgtatattgatttaagc 49 |||||||||||||||||||| Sbjct: 160975 aaatgtatattgatttaagc 160994
>dbj|AP004340.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0523A04 Length = 149049 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 caaatgtatattgatttaag 48 |||||||||||||||||||| Sbjct: 36605 caaatgtatattgatttaag 36586
>dbj|AP005194.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0565A07 Length = 152191 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 caaatgtatattgatttaag 48 |||||||||||||||||||| Sbjct: 131696 caaatgtatattgatttaag 131677
>dbj|AK103504.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131D01, full insert sequence Length = 3755 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 caaatgtatattgatttaag 48 |||||||||||||||||||| Sbjct: 2430 caaatgtatattgatttaag 2449
>dbj|AP002027.1| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:496L13, complete sequence Length = 182676 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ccccaaatgtatattgattt 45 |||||||||||||||||||| Sbjct: 71158 ccccaaatgtatattgattt 71177 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,567,293 Number of Sequences: 3902068 Number of extensions: 3567293 Number of successful extensions: 60906 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 60884 Number of HSP's gapped (non-prelim): 22 length of query: 424 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 402 effective length of database: 17,147,199,772 effective search space: 6893174308344 effective search space used: 6893174308344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)