ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet21d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ581529.1|HVU581529 Hordeum vulgare xi gene for xylanase in... 587 e-164
2emb|AJ581531.1|SCE581531 Secale cereale partial xi-IV gene for x... 379 e-102
3emb|AJ697851.1| Triticum aestivum xi-IB gene for xylanase inhibi... 371 1e-99
4emb|AJ581532.1|SCE581532 Secale cereale xi-II/III gene for xylan... 371 1e-99
5dbj|AB178471.1| Triticum aestivum Taxi-III gene for xylanase inh... 371 1e-99
6dbj|AB114627.1| Triticum aestivum Taxi-III mRNA for xylanase inh... 371 1e-99
7emb|AJ697850.1| Triticum aestivum partial xi-IIB gene for xylana... 355 7e-95
8dbj|AB114628.1| Triticum aestivum Taxi-IV mRNA for xylanase inhi... 355 7e-95
9emb|AJ581530.1|SCE581530 Secale cereale partial xi-I gene for xy... 353 3e-94
10dbj|AB114626.1| Triticum aestivum taxi-I mRNA for xylanase inhib... 345 7e-92
11emb|AJ438880.1|TAE438880 Triticum aestivum xiI gene for xylanase... 345 7e-92
12emb|AJ697849.1| Triticum aestivum partial xi-IIA gene for xylana... 307 1e-80
13gb|BT009260.1| Triticum aestivum clone wlk4.pk0017.d2:fis, full ... 299 4e-78
14ref|NM_190072.1| Oryza sativa (japonica cultivar-group), predic... 70 6e-09
15dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 70 6e-09
16dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic D... 70 6e-09
17dbj|AK105806.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
18gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 46 0.088
19gb|CP000081.1| Leishmania major chromosome 35, complete sequence 44 0.35
20ref|XM_838074.1| Leishmania major strain Friedlin SNF-7-like pro... 44 0.35
21ref|XM_536297.2| PREDICTED: Canis familiaris similar to monogeni... 44 0.35
22emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 5.4
23gb|AY181039.1| Methylobacterium extorquens enolase (eno) gene, c... 40 5.4
24ref|XM_649986.1| Entamoeba histolytica HM-1:IMSS patatin-like ph... 40 5.4
25emb|AL645817.1| Human DNA sequence from clone RP1-2A2 on chromos... 40 5.4
26gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
27gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 5.4
28gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 40 5.4
29dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
30dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
31dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
32dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
33ref|XM_561218.1| Anopheles gambiae str. PEST ENSANGP00000026539 ... 40 5.4
34emb|Z84816.1|HS2A2B Human DNA sequence from PAC 2A2 on chromosom... 40 5.4
35gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 40 5.4
36gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
37gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
38emb|AL731883.4|CNS08C8N Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.4
39emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.4
40emb|AM113472.1| Micromonospora sp. ML1 thiocoraline gene cluster 40 5.4
41gb|U55381.1|LTU55381 Leishmania tropica P-glycoprotein E gene, c... 40 5.4
42dbj|AB007905.1| Schizosaccharomyces pombe gene for Cad1 protein,... 40 5.4 
>emb|AJ581529.1|HVU581529 Hordeum vulgare xi gene for xylanase inhibitor
          Length = 1255

 Score =  587 bits (296), Expect = e-164
 Identities = 305/308 (99%)
 Strand = Plus / Minus

                                                                        
Query: 100  ttcataaaaccgggcgctagcgttttttctaaaagttcaagttgccgcaacccgtgaagt 159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 ttcataaaaccgggcgctagcgttttttctaaaagttcaagttgccgcaacccgtgaagt 1196

                                                                        
Query: 160  gcggcagcctgataaacccgagccgtttcttctccatgtcgaagtcgagcacgaagtcct 219
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1195 gcggcagcctgataaacccgagccgcttcttctccatgtcgaagtcgagcacgaagtcct 1136

                                                                        
Query: 220  ccatctgggcacctccgaggatcaccgccggcgccccgccgtcgccggcctccatctcca 279
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 ccatctgggcccctccgaggatcaccgccggcgccccgccgtcgccggcctccatctcca 1076

                                                                        
Query: 280  cgaacgcaacgcacgccgtccctggcttgacgtccaccatcgagttcttcccggtcatcg 339
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1075 cgaacgcaacgcacgccgtccccggcttgacgtccaccatcgagttcttcccggtcatcg 1016

                                                                        
Query: 340  cccattcacccccgccgtcgagcgccagcaccacgttgggcaccgagtacccgccgaggt 399
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 cccattcacccccgccgtcgagcgccagcaccacgttgggcaccgagtacccgccgaggt 956

                    
Query: 400  tgttgccc 407
            ||||||||
Sbjct: 955  tgttgccc 948
to top
>emb|AJ581531.1|SCE581531 Secale cereale partial xi-IV gene for xylanase inhibitor
          Length = 737

 Score =  379 bits (191), Expect = e-102
 Identities = 253/275 (92%), Gaps = 9/275 (3%)
 Strand = Plus / Minus

                                                                       
Query: 142 tgccgcaacccgtgaagtgcggcagcctgataaacccgagccgtttcttctccatgtcga 201
           ||||||| ||||| ||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 583 tgccgcagcccgtaaagtgcggcagcctggtaaacccgagccgcttcttctccatgtcga 524

                                                                       
Query: 202 agtcgagcacgaagtcctccatctgggcacctccgaggatcaccgccggcgccccgccgt 261
           |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 523 agtcgagcacgaagtcctccatctgggcccctccgaggatcaccgccggcgccctgccgt 464

                                                                       
Query: 262 cgccggcctcc---------atctccacgaacgcaacgcacgccgtccctggcttgacgt 312
           |||||||||||         ||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 463 cgccggcctccgcccccttcatctccacgaacgcaacgcacgccgtccccggcctgacgt 404

                                                                       
Query: 313 ccaccatcgagttcttcccggtcatcgcccattcacccccgccgtcgagcgccagcacca 372
           ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||  |
Sbjct: 403 ccaccatcgagttcttcccggtcatcgcccactcaccgccgccgtcgagcgccagcagga 344

                                              
Query: 373 cgttgggcaccgagtacccgccgaggttgttgccc 407
           |||||||||||| ||||||||||||||||||||||
Sbjct: 343 cgttgggcaccgcgtacccgccgaggttgttgccc 309
to top
>emb|AJ697851.1| Triticum aestivum xi-IB gene for xylanase inhibitor precursor, exon 1
          Length = 1206

 Score =  371 bits (187), Expect = 1e-99
 Identities = 252/275 (91%), Gaps = 9/275 (3%)
 Strand = Plus / Minus

                                                                        
Query: 142  tgccgcaacccgtgaagtgcggcagcctgataaacccgagccgtttcttctccatgtcga 201
            ||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 1201 tgccgcaacccgtaaagtgcggcagcctgagaaacccgagccgcttcttctccatgtcga 1142

                                                                        
Query: 202  agtcgagcacgaagtcctccatctgggcacctccgaggatcaccgccggcgccccgccgt 261
            |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 1141 agtcgagcacgaagtcctccatctgggctcctccgaggatcaccgccggcgccctgccgt 1082

                                                                        
Query: 262  cgccggcctc---------catctccacgaacgcaacgcacgccgtccctggcttgacgt 312
            ||||||||||         |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1081 cgccggcctccacccccttcatctccacgaacgcaacgcacgccgtccccggcttgacgt 1022

                                                                        
Query: 313  ccaccatcgagttcttcccggtcatcgcccattcacccccgccgtcgagcgccagcacca 372
            ||||||||||||||||||||||||||||||| |||| |||||||||||  |||||| | |
Sbjct: 1021 ccaccatcgagttcttcccggtcatcgcccagtcactcccgccgtcgactgccagcccaa 962

                                               
Query: 373  cgttgggcaccgagtacccgccgaggttgttgccc 407
            |||| |||||| |||||||||||||||||||||||
Sbjct: 961  cgttcggcacccagtacccgccgaggttgttgccc 927
to top
>emb|AJ581532.1|SCE581532 Secale cereale xi-II/III gene for xylanase inhibitor
          Length = 1245

 Score =  371 bits (187), Expect = 1e-99
 Identities = 252/275 (91%), Gaps = 9/275 (3%)
 Strand = Plus / Minus

                                                                        
Query: 142  tgccgcaacccgtgaagtgcggcagcctgataaacccgagccgtttcttctccatgtcga 201
            ||||||| ||||| ||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 1191 tgccgcagcccgtaaagtgcggcagcctggtaaacccgagccgcttcttctccatgtcga 1132

                                                                        
Query: 202  agtcgagcacgaagtcctccatctgggcacctccgaggatcaccgccggcgccccgccgt 261
            |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 1131 agtcgagcacgaagtcctccatctgggcccctccgaggatcaccgccggcgccctgccgt 1072

                                                                        
Query: 262  cgccggcctc---------catctccacgaacgcaacgcacgccgtccctggcttgacgt 312
            ||||||||||         ||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 1071 cgccggcctccacccccttcatctccacgaacgcgacgcacgccgtccccggcttgacgt 1012

                                                                        
Query: 313  ccaccatcgagttcttcccggtcatcgcccattcacccccgccgtcgagcgccagcacca 372
            ||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||  |
Sbjct: 1011 ccaccatggagttcttcccggtcatggcccactcacccccgccgtcgagcgccagcagga 952

                                               
Query: 373  cgttgggcaccgagtacccgccgaggttgttgccc 407
            |||||||||||| ||||||||||||||||||||||
Sbjct: 951  cgttgggcaccgcgtacccgccgaggttgttgccc 917
to top
>dbj|AB178471.1| Triticum aestivum Taxi-III gene for xylanase inhibitor, complete cds,
            upstream region
          Length = 2322

 Score =  371 bits (187), Expect = 1e-99
 Identities = 252/275 (91%), Gaps = 9/275 (3%)
 Strand = Plus / Minus

                                                                        
Query: 142  tgccgcaacccgtgaagtgcggcagcctgataaacccgagccgtttcttctccatgtcga 201
            ||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 2277 tgccgcaacccgtaaagtgcggcagcctgagaaacccgagccgcttcttctccatgtcga 2218

                                                                        
Query: 202  agtcgagcacgaagtcctccatctgggcacctccgaggatcaccgccggcgccccgccgt 261
            |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 2217 agtcgagcacgaagtcctccatctgggctcctccgaggatcaccgccggcgccctgccgt 2158

                                                                        
Query: 262  cgccggcctc---------catctccacgaacgcaacgcacgccgtccctggcttgacgt 312
            ||||||||||         |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2157 cgccggcctccacccccttcatctccacgaacgcaacgcacgccgtccccggcttgacgt 2098

                                                                        
Query: 313  ccaccatcgagttcttcccggtcatcgcccattcacccccgccgtcgagcgccagcacca 372
            ||||||||||||||||||||||||||||||| |||| |||||||||||  |||||| | |
Sbjct: 2097 ccaccatcgagttcttcccggtcatcgcccagtcactcccgccgtcgactgccagcccaa 2038

                                               
Query: 373  cgttgggcaccgagtacccgccgaggttgttgccc 407
            |||| |||||| |||||||||||||||||||||||
Sbjct: 2037 cgttcggcacccagtacccgccgaggttgttgccc 2003
to top
>dbj|AB114627.1| Triticum aestivum Taxi-III mRNA for xylanase inhibitor TAXI-III,
            complete cds
          Length = 1411

 Score =  371 bits (187), Expect = 1e-99
 Identities = 252/275 (91%), Gaps = 9/275 (3%)
 Strand = Plus / Minus

                                                                        
Query: 142  tgccgcaacccgtgaagtgcggcagcctgataaacccgagccgtttcttctccatgtcga 201
            ||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 1280 tgccgcaacccgtaaagtgcggcagcctgagaaacccgagccgcttcttctccatgtcga 1221

                                                                        
Query: 202  agtcgagcacgaagtcctccatctgggcacctccgaggatcaccgccggcgccccgccgt 261
            |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 1220 agtcgagcacgaagtcctccatctgggctcctccgaggatcaccgccggcgccctgccgt 1161

                                                                        
Query: 262  cgccggcctc---------catctccacgaacgcaacgcacgccgtccctggcttgacgt 312
            ||||||||||         |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1160 cgccggcctccacccccttcatctccacgaacgcaacgcacgccgtccccggcttgacgt 1101

                                                                        
Query: 313  ccaccatcgagttcttcccggtcatcgcccattcacccccgccgtcgagcgccagcacca 372
            ||||||||||||||||||||||||||||||| |||| |||||||||||  |||||| | |
Sbjct: 1100 ccaccatcgagttcttcccggtcatcgcccagtcactcccgccgtcgactgccagcccaa 1041

                                               
Query: 373  cgttgggcaccgagtacccgccgaggttgttgccc 407
            |||| |||||| |||||||||||||||||||||||
Sbjct: 1040 cgttcggcacccagtacccgccgaggttgttgccc 1006
to top
>emb|AJ697850.1| Triticum aestivum partial xi-IIB gene for xylanase inhibitor
            precursor, exon 1
          Length = 1170

 Score =  355 bits (179), Expect = 7e-95
 Identities = 247/271 (91%), Gaps = 9/271 (3%)
 Strand = Plus / Minus

                                                                        
Query: 146  gcaacccgtgaagtgcggcagcctgataaacccgagccgtttcttctccatgtcgaagtc 205
            ||||||||| || |||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 1140 gcaacccgtaaattgcggcagcctgctaaacccgagccgcttcttctccatgtcgaagtc 1081

                                                                        
Query: 206  gagcacgaagtcctccatctgggcacctccgaggatcaccgccggcgccccgccgtcgcc 265
            |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 1080 gagcacgaagtcctccatctgggctcctccgaggatcaccgccggcgccctgccgtcgcc 1021

                                                                        
Query: 266  ggcctc---------catctccacgaacgcaacgcacgccgtccctggcttgacgtccac 316
            ||||||         |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1020 ggcctccacccccttcatctccacgaacgcaacgcacgccgtccccggcttgacgtccac 961

                                                                        
Query: 317  catcgagttcttcccggtcatcgcccattcacccccgccgtcgagcgccagcaccacgtt 376
            ||||||||||||||||||||||||||| |||| |||||||||||  |||||| | |||||
Sbjct: 960  catcgagttcttcccggtcatcgcccagtcactcccgccgtcgactgccagcccaacgtt 901

                                           
Query: 377  gggcaccgagtacccgccgaggttgttgccc 407
             |||||| |||||||||||||||||||||||
Sbjct: 900  cggcacccagtacccgccgaggttgttgccc 870
to top
>dbj|AB114628.1| Triticum aestivum Taxi-IV mRNA for xylanase inhibitor TAXI-IV,
            complete cds
          Length = 1387

 Score =  355 bits (179), Expect = 7e-95
 Identities = 247/271 (91%), Gaps = 9/271 (3%)
 Strand = Plus / Minus

                                                                        
Query: 146  gcaacccgtgaagtgcggcagcctgataaacccgagccgtttcttctccatgtcgaagtc 205
            ||||||||| || |||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 1248 gcaacccgtaaattgcggcagcctgctaaacccgagccgcttcttctccatgtcgaagtc 1189

                                                                        
Query: 206  gagcacgaagtcctccatctgggcacctccgaggatcaccgccggcgccccgccgtcgcc 265
            |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 1188 gagcacgaagtcctccatctgggctcctccgaggatcaccgccggcgccctgccgtcgcc 1129

                                                                        
Query: 266  ggcctc---------catctccacgaacgcaacgcacgccgtccctggcttgacgtccac 316
            ||||||         |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1128 ggcctccacccccttcatctccacgaacgcaacgcacgccgtccccggcttgacgtccac 1069

                                                                        
Query: 317  catcgagttcttcccggtcatcgcccattcacccccgccgtcgagcgccagcaccacgtt 376
            ||||||||||||||||||||||||||| |||| |||||||||||  |||||| | |||||
Sbjct: 1068 catcgagttcttcccggtcatcgcccagtcactcccgccgtcgactgccagcccaacgtt 1009

                                           
Query: 377  gggcaccgagtacccgccgaggttgttgccc 407
             |||||| |||||||||||||||||||||||
Sbjct: 1008 cggcacccagtacccgccgaggttgttgccc 978



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 60   tgtagataaacagacttatta 80
            |||||||||||||||||||||
Sbjct: 1317 tgtagataaacagacttatta 1297
to top
>emb|AJ581530.1|SCE581530 Secale cereale partial xi-I gene for xylanase inhibitor
          Length = 578

 Score =  353 bits (178), Expect = 3e-94
 Identities = 246/270 (91%), Gaps = 9/270 (3%)
 Strand = Plus / Minus

                                                                       
Query: 147 caacccgtgaagtgcggcagcctgataaacccgagccgtttcttctccatgtcgaagtcg 206
           |||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 578 caacccgtaaagtgcggcagcctggtaaacccgagccgcttcttctccatgtcgaagtcg 519

                                                                       
Query: 207 agcacgaagtcctccatctgggcacctccgaggatcaccgccggcgccccgccgtcgccg 266
           |||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||
Sbjct: 518 agcacgaagtcctccatctgtgcccctccgaggatcaccgccggcgccctgccgtcgccg 459

                                                                       
Query: 267 gcctc---------catctccacgaacgcaacgcacgccgtccctggcttgacgtccacc 317
           |||||         ||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 458 gcctccacccccttcatctccacgaacgcaacgcatgccgtccccggcttgacgtccacc 399

                                                                       
Query: 318 atcgagttcttcccggtcatcgcccattcacccccgccgtcgagcgccagcaccacgttg 377
           |||||||||||||||||||| ||||| || || |||||||||||||||||||  ||||||
Sbjct: 398 atcgagttcttcccggtcatggcccagtccccgccgccgtcgagcgccagcaggacgttg 339

                                         
Query: 378 ggcaccgagtacccgccgaggttgttgccc 407
           ||||||| ||||||||||||||||||||||
Sbjct: 338 ggcaccgcgtacccgccgaggttgttgccc 309
to top
>dbj|AB114626.1| Triticum aestivum taxi-I mRNA for xylanase inhibitor TAXI-I, complete
            cds
          Length = 1374

 Score =  345 bits (174), Expect = 7e-92
 Identities = 248/274 (90%), Gaps = 9/274 (3%)
 Strand = Plus / Minus

                                                                        
Query: 143  gccgcaacccgtgaagtgcggcagcctgataaacccgagccgtttcttctccatgtcgaa 202
            |||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 1258 gccgcaacccgtaaagtgcggcagcctgctaaacccgagccgcttcttctccatgtcgaa 1199

                                                                        
Query: 203  gtcgagcacgaagtcctccatctgggcacctccgaggatcaccgccggcgccccgccgtc 262
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 1198 gtcgagcacgaagtcctccatctgggcccctccgaggatcaccgccggcgccctgccgtc 1139

                                                                        
Query: 263  gccgg---------cctccatctccacgaacgcaacgcacgccgtccctggcttgacgtc 313
            |||||         ||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1138 gccggccgccactcccttcatctccacgaacgcaacgcacgccgtcccttgcttgacgtc 1079

                                                                        
Query: 314  caccatcgagttcttcccggtcatcgcccattcacccccgccgtcgagcgccagcaccac 373
            |||||||||||||||||||||||||| ||| ||||  ||||| |||||| |||||   ||
Sbjct: 1078 caccatcgagttcttcccggtcatcgtccagtcactgccgccatcgagccccagctggac 1019

                                              
Query: 374  gttgggcaccgagtacccgccgaggttgttgccc 407
            ||||||||||| ||||||||||||||||||||||
Sbjct: 1018 gttgggcaccgcgtacccgccgaggttgttgccc 985
to top
>emb|AJ438880.1|TAE438880 Triticum aestivum xiI gene for xylanase inhibitor
          Length = 1298

 Score =  345 bits (174), Expect = 7e-92
 Identities = 248/274 (90%), Gaps = 9/274 (3%)
 Strand = Plus / Minus

                                                                        
Query: 143  gccgcaacccgtgaagtgcggcagcctgataaacccgagccgtttcttctccatgtcgaa 202
            |||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 1250 gccgcaacccgtaaagtgcggcagcctgctaaacccgagccgcttcttctccatgtcgaa 1191

                                                                        
Query: 203  gtcgagcacgaagtcctccatctgggcacctccgaggatcaccgccggcgccccgccgtc 262
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 1190 gtcgagcacgaagtcctccatctgggcccctccgaggatcaccgccggcgccctgccgtc 1131

                                                                        
Query: 263  gccgg---------cctccatctccacgaacgcaacgcacgccgtccctggcttgacgtc 313
            |||||         ||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1130 gccggccgccactcccttcatctccacgaacgcaacgcacgccgtcccttgcttgacgtc 1071

                                                                        
Query: 314  caccatcgagttcttcccggtcatcgcccattcacccccgccgtcgagcgccagcaccac 373
            |||||||||||||||||||||||||| ||| ||||  ||||| |||||| |||||   ||
Sbjct: 1070 caccatcgagttcttcccggtcatcgtccagtcactgccgccatcgagccccagctggac 1011

                                              
Query: 374  gttgggcaccgagtacccgccgaggttgttgccc 407
            ||||||||||| ||||||||||||||||||||||
Sbjct: 1010 gttgggcaccgcgtacccgccgaggttgttgccc 977
to top
>emb|AJ697849.1| Triticum aestivum partial xi-IIA gene for xylanase inhibitor
            precursor, exon 1
          Length = 1170

 Score =  307 bits (155), Expect = 1e-80
 Identities = 241/271 (88%), Gaps = 9/271 (3%)
 Strand = Plus / Minus

                                                                        
Query: 146  gcaacccgtgaagtgcggcagcctgataaacccgagccgtttcttctccatgtcgaagtc 205
            ||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 1140 gcaacccgtaaagtgcggcagcctgagaaacccgagccgcttcttctccatgtcgaagtc 1081

                                                                        
Query: 206  gagcacgaagtcctccatctgggcacctccgaggatcaccgccggcgccccgccgtcgcc 265
            |||||||||||||||||||||||| ||||| ||||||||||||||||| | ||| |||||
Sbjct: 1080 gagcacgaagtcctccatctgggctcctcccaggatcaccgccggcgcactgccatcgcc 1021

                                                                        
Query: 266  gg---------cctccatctccacgaacgcaacgcacgccgtccctggcttgacgtccac 316
            ||         ||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1020 ggcatcaacccccttcatctccacgaacgcaacgcacgccgtccccggcttgacgtccac 961

                                                                        
Query: 317  catcgagttcttcccggtcatcgcccattcacccccgccgtcgagcgccagcaccacgtt 376
            ||| |||||||||||||||| |||||| |||| ||||||||| ||| ||||||  |||||
Sbjct: 960  cattgagttcttcccggtcagcgcccagtcactcccgccgtcaagctccagcaggacgtt 901

                                           
Query: 377  gggcaccgagtacccgccgaggttgttgccc 407
            ||||||| ||||||||||| |||| ||||||
Sbjct: 900  gggcacccagtacccgccggggttattgccc 870
to top
>gb|BT009260.1| Triticum aestivum clone wlk4.pk0017.d2:fis, full insert mRNA
           sequence
          Length = 1343

 Score =  299 bits (151), Expect = 4e-78
 Identities = 240/271 (88%), Gaps = 9/271 (3%)
 Strand = Plus / Plus

                                                                       
Query: 146 gcaacccgtgaagtgcggcagcctgataaacccgagccgtttcttctccatgtcgaagtc 205
           ||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 148 gcaacccgtaaagtgcggcagcctgagaaacccgagccgcttcttctccatgtcgaagtc 207

                                                                       
Query: 206 gagcacgaagtcctccatctgggcacctccgaggatcaccgccggcgccccgccgtcgcc 265
           |||||||||||||||||||||||| ||||| || |||||||||||||| | ||| |||||
Sbjct: 208 gagcacgaagtcctccatctgggctcctcccagaatcaccgccggcgcactgccatcgcc 267

                                                                       
Query: 266 ggcctc---------catctccacgaacgcaacgcacgccgtccctggcttgacgtccac 316
           ||| ||         |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 268 ggcatcaacccccttcatctccacgaacgcaacgcacgccgtccccggcttgacgtccac 327

                                                                       
Query: 317 catcgagttcttcccggtcatcgcccattcacccccgccgtcgagcgccagcaccacgtt 376
           ||| |||||||||||||||| |||||| |||| ||||||||| ||| ||||||  |||||
Sbjct: 328 cattgagttcttcccggtcagcgcccagtcactcccgccgtcaagctccagcaggacgtt 387

                                          
Query: 377 gggcaccgagtacccgccgaggttgttgccc 407
           ||||||| ||||||||||| |||| ||||||
Sbjct: 388 gggcacccagtacccgccggggttattgccc 418
to top
>ref|NM_190072.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1260

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 136/169 (80%), Gaps = 3/169 (1%)
 Strand = Plus / Minus

                                                                        
Query: 174  aacccgagccgtttcttctccatgtcgaagtcgagcacgaagtcctccatctgggcacct 233
            ||||||||||| |||||||||  |||||| |  ||||  | || ||||||||||   |||
Sbjct: 1202 aacccgagccgcttcttctccgagtcgaactgcagcaacatgttctccatctggaaccct 1143

                                                                        
Query: 234  ccgaggatcaccgccggcgccc---cgccgtcgccggcctccatctccacgaacgcaacg 290
            |||||||||||||||||||  |   || ||||||||| || |||||||||||| || | |
Sbjct: 1142 ccgaggatcaccgccggcgaactggcggcgtcgccggacttcatctccacgaaggccagg 1083

                                                             
Query: 291  cacgccgtccctggcttgacgtccaccatcgagttcttcccggtcatcg 339
            |||||| | ||   ||| |||||||||||||||||  |||| |||||||
Sbjct: 1082 cacgccttgccccccttcacgtccaccatcgagttggtccccgtcatcg 1034
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 136/169 (80%), Gaps = 3/169 (1%)
 Strand = Plus / Plus

                                                                            
Query: 174      aacccgagccgtttcttctccatgtcgaagtcgagcacgaagtcctccatctgggcacct 233
                ||||||||||| |||||||||  |||||| |  ||||  | || ||||||||||   |||
Sbjct: 41134562 aacccgagccgcttcttctccgagtcgaactgcagcaacatgttctccatctggaaccct 41134621

                                                                            
Query: 234      ccgaggatcaccgccggcgccc---cgccgtcgccggcctccatctccacgaacgcaacg 290
                |||||||||||||||||||  |   || ||||||||| || |||||||||||| || | |
Sbjct: 41134622 ccgaggatcaccgccggcgaactggcggcgtcgccggacttcatctccacgaaggccagg 41134681

                                                                 
Query: 291      cacgccgtccctggcttgacgtccaccatcgagttcttcccggtcatcg 339
                |||||| | ||   ||| |||||||||||||||||  |||| |||||||
Sbjct: 41134682 cacgccttgccccccttcacgtccaccatcgagttggtccccgtcatcg 41134730
to top
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0504E02
          Length = 137468

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 136/169 (80%), Gaps = 3/169 (1%)
 Strand = Plus / Plus

                                                                         
Query: 174   aacccgagccgtttcttctccatgtcgaagtcgagcacgaagtcctccatctgggcacct 233
             ||||||||||| |||||||||  |||||| |  ||||  | || ||||||||||   |||
Sbjct: 31617 aacccgagccgcttcttctccgagtcgaactgcagcaacatgttctccatctggaaccct 31676

                                                                         
Query: 234   ccgaggatcaccgccggcgccc---cgccgtcgccggcctccatctccacgaacgcaacg 290
             |||||||||||||||||||  |   || ||||||||| || |||||||||||| || | |
Sbjct: 31677 ccgaggatcaccgccggcgaactggcggcgtcgccggacttcatctccacgaaggccagg 31736

                                                              
Query: 291   cacgccgtccctggcttgacgtccaccatcgagttcttcccggtcatcg 339
             |||||| | ||   ||| |||||||||||||||||  |||| |||||||
Sbjct: 31737 cacgccttgccccccttcacgtccaccatcgagttggtccccgtcatcg 31785
to top
>dbj|AK105806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-B07, full
            insert sequence
          Length = 1404

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 136/169 (80%), Gaps = 3/169 (1%)
 Strand = Plus / Minus

                                                                        
Query: 174  aacccgagccgtttcttctccatgtcgaagtcgagcacgaagtcctccatctgggcacct 233
            ||||||||||| |||||||||  |||||| |  ||||  | || ||||||||||   |||
Sbjct: 1214 aacccgagccgcttcttctccgagtcgaactgcagcaacatgttctccatctggaaccct 1155

                                                                        
Query: 234  ccgaggatcaccgccggcgccc---cgccgtcgccggcctccatctccacgaacgcaacg 290
            |||||||||||||||||||  |   || ||||||||| || |||||||||||| || | |
Sbjct: 1154 ccgaggatcaccgccggcgaactggcggcgtcgccggacttcatctccacgaaggccagg 1095

                                                             
Query: 291  cacgccgtccctggcttgacgtccaccatcgagttcttcccggtcatcg 339
            |||||| | ||   ||| |||||||||||||||||  |||| |||||||
Sbjct: 1094 cacgccttgccccccttcacgtccaccatcgagttggtccccgtcatcg 1046
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 352     cgccgtcgagcgccagcaccacg 374
               |||||||||||||||||||||||
Sbjct: 4534409 cgccgtcgagcgccagcaccacg 4534387
to top
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 188    cttctccatgtcgaagtcgagc 209
              ||||||||||||||||||||||
Sbjct: 282079 cttctccatgtcgaagtcgagc 282058
to top
>ref|XM_838074.1| Leishmania major strain Friedlin SNF-7-like protein (LMJ_0990)
           partial mRNA
          Length = 675

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 188 cttctccatgtcgaagtcgagc 209
           ||||||||||||||||||||||
Sbjct: 525 cttctccatgtcgaagtcgagc 504
to top
>ref|XM_536297.2| PREDICTED: Canis familiaris similar to monogenic, audiogenic seizure
             susceptibility 1 (LOC479153), mRNA
          Length = 19440

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 28    gttgttattacagggagtgatc 49
             ||||||||||||||||||||||
Sbjct: 16585 gttgttattacagggagtgatc 16606
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 193     ccatgtcgaagtcgagcacg 212
               ||||||||||||||||||||
Sbjct: 2779197 ccatgtcgaagtcgagcacg 2779216
to top
>gb|AY181039.1| Methylobacterium extorquens enolase (eno) gene, complete cds
          Length = 1290

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 356 gtcgagcgccagcaccacgt 375
           ||||||||||||||||||||
Sbjct: 726 gtcgagcgccagcaccacgt 707
to top
>ref|XM_649986.1| Entamoeba histolytica HM-1:IMSS patatin-like phospholipase,
           putative (37.t00005) partial mRNA
          Length = 1446

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 122 ttttttctaaaagttcaagt 141
           ||||||||||||||||||||
Sbjct: 79  ttttttctaaaagttcaagt 60
to top
>emb|AL645817.1| Human DNA sequence from clone RP1-2A2 on chromosome Xq21, complete
             sequence
          Length = 129249

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    aggattgttgttattacagg 41
             ||||||||||||||||||||
Sbjct: 37130 aggattgttgttattacagg 37111
to top
>gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0023F01, complete sequence
          Length = 145009

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    ccccgccgtcgccggcctcc 272
              ||||||||||||||||||||
Sbjct: 138017 ccccgccgtcgccggcctcc 137998
to top
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 186     ttcttctccatgtcgaagtcgagcacga 213
               ||||||||||||||||| | ||||||||
Sbjct: 2698864 ttcttctccatgtcgaaatagagcacga 2698837
to top
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
              sequence
          Length = 4332241

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    ttttttctaaaagttcaagt 141
              ||||||||||||||||||||
Sbjct: 450927 ttttttctaaaagttcaagt 450908
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 243      accgccggcgccccgccgtcgccg 266
                ||||||| ||||||||||||||||
Sbjct: 13022519 accgccgccgccccgccgtcgccg 13022496
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 253      ccccgccgtcgccggcctcc 272
                ||||||||||||||||||||
Sbjct: 26451703 ccccgccgtcgccggcctcc 26451722
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 234      ccgaggatcaccgccggcgc 253
                ||||||||||||||||||||
Sbjct: 28108458 ccgaggatcaccgccggcgc 28108439
to top
>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0009H10
          Length = 175754

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   ccgaggatcaccgccggcgc 253
             ||||||||||||||||||||
Sbjct: 39364 ccgaggatcaccgccggcgc 39345
to top
>ref|XM_561218.1| Anopheles gambiae str. PEST ENSANGP00000026539 (ENSANGG00000023275),
            partial mRNA
          Length = 1179

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 233  tccgaggatcaccgccggcg 252
            ||||||||||||||||||||
Sbjct: 1057 tccgaggatcaccgccggcg 1076
to top
>emb|Z84816.1|HS2A2B Human DNA sequence from PAC 2A2 on chromosome X contains ESTs
          Length = 96355

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    aggattgttgttattacagg 41
             ||||||||||||||||||||
Sbjct: 59226 aggattgttgttattacagg 59245
to top
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130,
              chromosome I, complete sequence
          Length = 4277185

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    ttttttctaaaagttcaagt 141
              ||||||||||||||||||||
Sbjct: 448900 ttttttctaaaagttcaagt 448881
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 253      ccccgccgtcgccggcctcc 272
                ||||||||||||||||||||
Sbjct: 26776967 ccccgccgtcgccggcctcc 26776986
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 243      accgccggcgccccgccgtcgccg 266
                ||||||| ||||||||||||||||
Sbjct: 12976793 accgccgccgccccgccgtcgccg 12976770
to top
>emb|AL731883.4|CNS08C8N Oryza sativa chromosome 12, . BAC OSJNBa0024B03 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 148110

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 243   accgccggcgccccgccgtcgccg 266
             ||||||| ||||||||||||||||
Sbjct: 45451 accgccgccgccccgccgtcgccg 45474
to top
>emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa0037L20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 178827

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 243   accgccggcgccccgccgtcgccg 266
             ||||||| ||||||||||||||||
Sbjct: 11722 accgccgccgccccgccgtcgccg 11699
to top
>emb|AM113472.1| Micromonospora sp. ML1 thiocoraline gene cluster
          Length = 64650

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 365   cagcaccacgttgggcaccgagtacccg 392
             |||||||||||||||||||  |||||||
Sbjct: 49155 cagcaccacgttgggcaccatgtacccg 49128
to top
>gb|U55381.1|LTU55381 Leishmania tropica P-glycoprotein E gene, complete cds
          Length = 6316

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 238  ggatcaccgccggcgccccgccgt 261
            ||||||||||||||||| ||||||
Sbjct: 4660 ggatcaccgccggcgccgcgccgt 4637
to top
>dbj|AB007905.1| Schizosaccharomyces pombe gene for Cad1 protein, complete cds
          Length = 2343

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 82   gtattacaaacgattttattcata 105
            ||||||||||| ||||||||||||
Sbjct: 2090 gtattacaaactattttattcata 2067


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,922,947
Number of Sequences: 3902068
Number of extensions: 2922947
Number of successful extensions: 61706
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60909
Number of HSP's gapped (non-prelim): 789
length of query: 407
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 385
effective length of database: 17,147,199,772
effective search space: 6601671912220
effective search space used: 6601671912220
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top