ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet21d01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|M31545.1|BLYGSA Barley glutamate 1-semialdehyde aminotransfer... 833 0.0
2gb|BT008916.1| Triticum aestivum clone wpa1c.pk004.m14:fis, full... 632 e-178
3gb|BT009635.1| Triticum aestivum clone wre1n.pk183.a6:fis, full ... 624 e-176
4ref|XM_483492.1| Oryza sativa (japonica cultivar-group), mRNA 244 2e-61
5ref|XM_507303.1| PREDICTED Oryza sativa (japonica cultivar-group... 244 2e-61
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 244 2e-61
7dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic D... 244 2e-61
8dbj|AK104694.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 2e-61
9dbj|AK064826.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 2e-61
10gb|AY112534.1| Zea mays CL13295_1 mRNA sequence 153 6e-34
11dbj|D29706.2|RICYK18 Oryza sativa mRNA, partial homologous to gl... 94 4e-16
12ref|NM_114732.3| Arabidopsis thaliana glutamate-1-semialdehyde 2... 64 4e-07
13gb|BT025324.1| Arabidopsis thaliana At3g48730 mRNA, complete cds 64 4e-07
14emb|AL133315.1|ATT8P19 Arabidopsis thaliana DNA chromosome 3, BA... 64 4e-07
15emb|BX824602.1|CNS0A5PJ Arabidopsis thaliana Full-length cDNA Co... 64 4e-07
16emb|BX842127.1|CNS09YB6 Arabidopsis thaliana Full-length cDNA Co... 64 4e-07
17gb|U10278.1|ATU10278 Arabidopsis thaliana Columbia glutamate-1-s... 64 4e-07
18emb|X65974.1|NTGSAMR2 N.tabacum mRNA for glutamate-1-semialdehyd... 56 1e-04
19emb|X65973.1|NTGSAMR1 N.tabacum mRNA for glutamate-1-semialdehyd... 56 1e-04
20gb|AF366293.1| Brassica napus glutamate 1-semialdehyde aminotran... 56 1e-04
21gb|AF364595.1| Brassica napus glutamate 1-semialdehyde aminotran... 50 0.006
22gb|U20260.1|GMU20260 Glycine max glutamate 1-semialdehyde aminot... 50 0.006
23gb|L12453.1|SOYGSA Soybean glutamate 1-semialdehyde aminotransfe... 50 0.006
24emb|AL627265.1| Salmonella enterica serovar Typhi (Salmonella ty... 48 0.024
25gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 48 0.024
26dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete... 44 0.37
27gb|AE017128.1| Yersinia pestis biovar Medievalis str. 91001 sect... 42 1.5
28gb|AF404302.1| Capra hircus sex-specific gonadal PISRT1 mRNA, co... 42 1.5
29gb|AE009952.1| Yersinia pestis KIM, complete genome 42 1.5
30ref|XM_451426.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A09757g ... 42 1.5
31gb|AC133099.3| Mus musculus BAC clone RP23-90K8 from chromosome ... 42 1.5
32emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 42 1.5
33emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp... 42 1.5
34emb|AJ414156.1| Yersinia pestis strain CO92 complete genome; seg... 42 1.5
35gb|AC092248.1|AC092248 Drosophila melanogaster, chromosome 2L, r... 42 1.5
36gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, r... 42 1.5
37gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52... 42 1.5
38gb|AC111074.4| Mus musculus chromosome 1, clone RP24-390A1, comp... 40 5.7
39gb|AF337025.1| Aphidius ervi clone 76 microsatellite sequence 40 5.7
40gb|AF336994.1| Aphidius ervi clone 74 microsatellite sequence 40 5.7
41ref|XM_461671.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 5.7
42gb|AC134552.4| Mus musculus BAC clone RP24-279K10 from chromosom... 40 5.7
43gb|BT013916.1| Lycopersicon esculentum clone 132913F, mRNA sequence 40 5.7
44gb|AC009600.20| Homo sapiens 2 BAC RP11-436K12 (Roswell Park Can... 40 5.7
45gb|AC122905.3| Mus musculus BAC clone RP23-47A1 from 10, complet... 40 5.7
46gb|AC151744.23| Medicago truncatula clone mth2-32k10, complete s... 40 5.7
47emb|AL162493.21| Human DNA sequence from clone RP11-120L14 on ch... 40 5.7
48emb|CR933103.10| Zebrafish DNA sequence from clone CH211-147G15 ... 40 5.7
49emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 5.7
50emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS... 40 5.7
51emb|AL603793.4| Mouse DNA sequence from clone RP23-131A14 on chr... 40 5.7
52emb|BX629343.11| Zebrafish DNA sequence from clone DKEY-66M17 in... 40 5.7
53gb|AF411807.1| Lycopersicon esculentum BAC clone Clemson_Id 127E... 40 5.7
54gb|AC093432.2| Homo sapiens chromosome 1 clone RP11-136D19, comp... 40 5.7
55gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 5.7
56gb|AC025750.10| Homo sapiens BAC clone RP11-804P20 from 2, compl... 40 5.7
57gb|AC138655.1| Homo sapiens BAC clone RP11-436K12 from 2, comple... 40 5.7
58gb|AC093756.3| Homo sapiens BAC clone RP11-56A1 from 2, complete... 40 5.7
59gb|AC148974.5| Mus musculus BAC clone RP24-165K23 from chromosom... 40 5.7
60emb|BX469897.6| Zebrafish DNA sequence from clone CH211-39F22 in... 40 5.7
61emb|CT573025.12| Mouse DNA sequence from clone RP23-36H17 on chr... 40 5.7
62gb|AC154698.2| Mus musculus BAC clone RP23-137A20 from 14, compl... 40 5.7
63gb|AC117231.4| Mus musculus BAC clone RP23-394M5 from 8, complet... 40 5.7
64emb|BX511192.4| Zebrafish DNA sequence from clone DKEYP-89C11 in... 40 5.7
65dbj|AP000757.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 5.7
66gb|AC125369.4| Mus musculus BAC clone RP24-380D10 from 8, comple... 40 5.7
67gb|AC134435.3| Mus musculus BAC clone RP24-423J19 from 1, comple... 40 5.7
68gb|AC131685.4| Mus musculus BAC clone RP23-372G24 from 1, comple... 40 5.7
69emb|AL844863.7| Mouse DNA sequence from clone RP23-273C23 on chr... 40 5.7
70emb|AL683881.12| Mouse DNA sequence from clone RP23-10M6 on chro... 40 5.7
71gb|L39279.1|TOMGSAAM Lycopersicon esculentum (clone GFPGSAAM) gl... 40 5.7
72emb|AL713871.8| Mouse DNA sequence from clone RP23-40P1 on chrom... 40 5.7
73emb|AL844493.6| Mouse DNA sequence from clone RP23-396G18 on chr... 40 5.7
74gb|U03632.1|CRU03632 Chlamydomonas reinhardtii NO- glutamate-1-s... 40 5.7

>gb|M31545.1|BLYGSA Barley glutamate 1-semialdehyde aminotransferase (GSA) mRNA, complete
            cds
          Length = 1620

 Score =  833 bits (420), Expect = 0.0
 Identities = 426/428 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    ggctagagacaagatactgctgctgcacaacaaaatacaatacaaaactaaacttcagcc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1550 ggctagagacaagatactgctgctgcacaacaaaatacaatacaaaactaaacttcagcc 1491

                                                                        
Query: 61   acgtacaaactaacagaatacaacagaaggaaaagcttcaaaaggtttgcaatccaaatc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1490 acgtacaaactaacagaatacaacagaaggaaaagcttcaaaaggtttgcaatccaaatc 1431

                                                                        
Query: 121  atctatatccatcgaagaaccttctcggcagcctccacggttttctcaatgtcttgggtg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1430 atctatatccatcgaagaaccttctcggcagcctccacggttttctcaatgtcttgggtg 1371

                                                                        
Query: 181  gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1370 gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttcg 1311

                                                                        
Query: 241  tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatcatca 300
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1310 cccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatcatca 1251

                                                                        
Query: 301  aagttgtgcactgggccacctgcgaagaagaatccgaacatgcctctgatgtgtcctcca 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1250 aagttgtgcactgggccacctgcgaagaagaatccgaacatgcctctgatgtgtcctcca 1191

                                                                        
Query: 361  cacatctcgtgccctgttttagcgcccacatccaatatgccccggacaagttcaccagtg 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1190 cacatctcgtgccctgttttagcgcccacatccaatatgccccggacaagttcaccagtg 1131

                    
Query: 421  accttgtc 428
            ||||||||
Sbjct: 1130 accttgtc 1123



to top

>gb|BT008916.1| Triticum aestivum clone wpa1c.pk004.m14:fis, full insert mRNA
            sequence
          Length = 1487

 Score =  632 bits (319), Expect = e-178
 Identities = 389/412 (94%), Gaps = 4/412 (0%)
 Strand = Plus / Minus

                                                                        
Query: 17   ctgctgctgcacaacaaaatacaatacaaaactaaacttcagccacgtacaaactaacag 76
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    ||
Sbjct: 1382 ctgctgctgcacaacaaaatacaatacgaaactaaacttcagccacgtacaaac----ag 1327

                                                                        
Query: 77   aatacaacagaaggaaaagcttcaaaaggtttgcaatccaaatcatctatatccatcgaa 136
            | ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||  ||||
Sbjct: 1326 agtacaacagaaggaaaggctccaaaaggtttgcaatccgaatcatctatatccgacgaa 1267

                                                                        
Query: 137  gaaccttctcggcagcctccacggttttctcaatgtcttgggtggtgtgtgccaagcttg 196
            |||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 1266 gaaccttctcagcagcctccacggttttctcaatgtctagggttgtgtgtgccaagcttg 1207

                                                                        
Query: 197  taaaacctgcctcgaactgggatggtgccagatacacgccttcttccagcattccacggt 256
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1206 taaaacctgcctcgaactgggatggtgccaaatacacgccttcttccagcattccacggt 1147

                                                                        
Query: 257  ggaacctcccaaacttcgctgtgtcactcttcttggcatcatcaaagttgtgcactgggc 316
            ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 1146 ggaacctcccaaacttcgcggtgtcgctcttcttggcgtcatcaaagttgtgcactgggc 1087

                                                                        
Query: 317  cacctgcgaagaagaatccgaacatgcctctgatgtgtcctccacacatctcgtgccctg 376
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1086 cacctgcgaagaagaatccgaacatgcccctgatgtgtcctccacacatctcgtgccctg 1027

                                                                
Query: 377  ttttagcgcccacatccaatatgccccggacaagttcaccagtgaccttgtc 428
            ||||||| ||| |||||||||| ||| |||||||||||||||||||||||||
Sbjct: 1026 ttttagcacccgcatccaatataccctggacaagttcaccagtgaccttgtc 975



to top

>gb|BT009635.1| Triticum aestivum clone wre1n.pk183.a6:fis, full insert mRNA
           sequence
          Length = 1016

 Score =  624 bits (315), Expect = e-176
 Identities = 388/412 (94%), Gaps = 4/412 (0%)
 Strand = Plus / Minus

                                                                       
Query: 17  ctgctgctgcacaacaaaatacaatacaaaactaaacttcagccacgtacaaactaacag 76
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    ||
Sbjct: 953 ctgctgctgcacaacaaaatacaatacgaaactaaacttcagccacgtacaaac----ag 898

                                                                       
Query: 77  aatacaacagaaggaaaagcttcaaaaggtttgcaatccaaatcatctatatccatcgaa 136
           | ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||  ||||
Sbjct: 897 agtacaacagaaggaaaggctccaaaaggtttgcaatccgaatcatctatatccgacgaa 838

                                                                       
Query: 137 gaaccttctcggcagcctccacggttttctcaatgtcttgggtggtgtgtgccaagcttg 196
           |||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 837 gaaccttctcagcagcctccacggttttctcaatgtctagggttgtgtgtgccaagcttg 778

                                                                       
Query: 197 taaaacctgcctcgaactgggatggtgccagatacacgccttcttccagcattccacggt 256
           |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 777 taaaacctgcctcgaactgggatggtgctaaatacacgccttcttccagcattccacggt 718

                                                                       
Query: 257 ggaacctcccaaacttcgctgtgtcactcttcttggcatcatcaaagttgtgcactgggc 316
           ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 717 ggaacctcccaaacttcgcggtgtcgctcttcttggcgtcatcaaagttgtgcactgggc 658

                                                                       
Query: 317 cacctgcgaagaagaatccgaacatgcctctgatgtgtcctccacacatctcgtgccctg 376
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 657 cacctgcgaagaagaatccgaacatgcccctgatgtgtcctccacacatctcgtgccctg 598

                                                               
Query: 377 ttttagcgcccacatccaatatgccccggacaagttcaccagtgaccttgtc 428
           ||||||| ||| |||||||||| ||| |||||||||||||||||||||||||
Sbjct: 597 ttttagcacccgcatccaatataccctggacaagttcaccagtgaccttgtc 546



to top

>ref|XM_483492.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1575

 Score =  244 bits (123), Expect = 2e-61
 Identities = 261/307 (85%)
 Strand = Plus / Minus

                                                                        
Query: 122  tctatatccatcgaagaaccttctcggcagcctccacggttttctcaatgtcttgggtgg 181
            |||||||||  |||||||| ||| | || |||||||||||||| || ||||| |||| ||
Sbjct: 1463 tctatatccggcgaagaactttcgcagctgcctccacggttttttcgatgtcctgggagg 1404

                                                                        
Query: 182  tgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttctt 241
            ||||||||||||| || ||||||||||| ||||||||||| || || ||||| |||||||
Sbjct: 1403 tgtgtgccaagctggtgaaacctgcctcaaactgggatggagctaggtacacaccttctt 1344

                                                                        
Query: 242  ccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatcatcaa 301
            | ||||| || |||| ||||||||||||||| || |||||||||||||| || ||| |||
Sbjct: 1343 caagcatgccccggtagaacctcccaaacttggcggtgtcactcttcttcgcgtcaccaa 1284

                                                                        
Query: 302  agttgtgcactgggccacctgcgaagaagaatccgaacatgcctctgatgtgtcctccac 361
            ||||||| ||||||||| | | ||||||||| |||||||| || ||||||||||||||||
Sbjct: 1283 agttgtgaactgggccagcggtgaagaagaacccgaacatccccctgatgtgtcctccac 1224

                                                                        
Query: 362  acatctcgtgccctgttttagcgcccacatccaatatgccccggacaagttcaccagtga 421
            ||||||| || || ||||| || ||| | |||||||  || || ||||| ||||||||||
Sbjct: 1223 acatctcatgtccagttttcgcacccgcgtccaataccccgcgaacaagatcaccagtga 1164

                   
Query: 422  ccttgtc 428
             ||||||
Sbjct: 1163 tcttgtc 1157



to top

>ref|XM_507303.1| PREDICTED Oryza sativa (japonica cultivar-group), P0702E04.16 mRNA
          Length = 1719

 Score =  244 bits (123), Expect = 2e-61
 Identities = 261/307 (85%)
 Strand = Plus / Minus

                                                                        
Query: 122  tctatatccatcgaagaaccttctcggcagcctccacggttttctcaatgtcttgggtgg 181
            |||||||||  |||||||| ||| | || |||||||||||||| || ||||| |||| ||
Sbjct: 1520 tctatatccggcgaagaactttcgcagctgcctccacggttttttcgatgtcctgggagg 1461

                                                                        
Query: 182  tgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttctt 241
            ||||||||||||| || ||||||||||| ||||||||||| || || ||||| |||||||
Sbjct: 1460 tgtgtgccaagctggtgaaacctgcctcaaactgggatggagctaggtacacaccttctt 1401

                                                                        
Query: 242  ccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatcatcaa 301
            | ||||| || |||| ||||||||||||||| || |||||||||||||| || ||| |||
Sbjct: 1400 caagcatgccccggtagaacctcccaaacttggcggtgtcactcttcttcgcgtcaccaa 1341

                                                                        
Query: 302  agttgtgcactgggccacctgcgaagaagaatccgaacatgcctctgatgtgtcctccac 361
            ||||||| ||||||||| | | ||||||||| |||||||| || ||||||||||||||||
Sbjct: 1340 agttgtgaactgggccagcggtgaagaagaacccgaacatccccctgatgtgtcctccac 1281

                                                                        
Query: 362  acatctcgtgccctgttttagcgcccacatccaatatgccccggacaagttcaccagtga 421
            ||||||| || || ||||| || ||| | |||||||  || || ||||| ||||||||||
Sbjct: 1280 acatctcatgtccagttttcgcacccgcgtccaataccccgcgaacaagatcaccagtga 1221

                   
Query: 422  ccttgtc 428
             ||||||
Sbjct: 1220 tcttgtc 1214



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  244 bits (123), Expect = 2e-61
 Identities = 261/307 (85%)
 Strand = Plus / Plus

                                                                            
Query: 122      tctatatccatcgaagaaccttctcggcagcctccacggttttctcaatgtcttgggtgg 181
                |||||||||  |||||||| ||| | || |||||||||||||| || ||||| |||| ||
Sbjct: 26524372 tctatatccggcgaagaactttcgcagctgcctccacggttttttcgatgtcctgggagg 26524431

                                                                            
Query: 182      tgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttctt 241
                ||||||||||||| || ||||||||||| ||||||||||| || || ||||| |||||||
Sbjct: 26524432 tgtgtgccaagctggtgaaacctgcctcaaactgggatggagctaggtacacaccttctt 26524491

                                                                            
Query: 242      ccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatcatcaa 301
                | ||||| || |||| ||||||||||||||| || |||||||||||||| || ||| |||
Sbjct: 26524492 caagcatgccccggtagaacctcccaaacttggcggtgtcactcttcttcgcgtcaccaa 26524551

                                                                            
Query: 302      agttgtgcactgggccacctgcgaagaagaatccgaacatgcctctgatgtgtcctccac 361
                ||||||| ||||||||| | | ||||||||| |||||||| || ||||||||||||||||
Sbjct: 26524552 agttgtgaactgggccagcggtgaagaagaacccgaacatccccctgatgtgtcctccac 26524611

                                                                            
Query: 362      acatctcgtgccctgttttagcgcccacatccaatatgccccggacaagttcaccagtga 421
                ||||||| || || ||||| || ||| | |||||||  || || ||||| ||||||||||
Sbjct: 26524612 acatctcatgtccagttttcgcacccgcgtccaataccccgcgaacaagatcaccagtga 26524671

                       
Query: 422      ccttgtc 428
                 ||||||
Sbjct: 26524672 tcttgtc 26524678



to top

>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0702E04
          Length = 190948

 Score =  244 bits (123), Expect = 2e-61
 Identities = 261/307 (85%)
 Strand = Plus / Plus

                                                                         
Query: 122   tctatatccatcgaagaaccttctcggcagcctccacggttttctcaatgtcttgggtgg 181
             |||||||||  |||||||| ||| | || |||||||||||||| || ||||| |||| ||
Sbjct: 73239 tctatatccggcgaagaactttcgcagctgcctccacggttttttcgatgtcctgggagg 73298

                                                                         
Query: 182   tgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttctt 241
             ||||||||||||| || ||||||||||| ||||||||||| || || ||||| |||||||
Sbjct: 73299 tgtgtgccaagctggtgaaacctgcctcaaactgggatggagctaggtacacaccttctt 73358

                                                                         
Query: 242   ccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatcatcaa 301
             | ||||| || |||| ||||||||||||||| || |||||||||||||| || ||| |||
Sbjct: 73359 caagcatgccccggtagaacctcccaaacttggcggtgtcactcttcttcgcgtcaccaa 73418

                                                                         
Query: 302   agttgtgcactgggccacctgcgaagaagaatccgaacatgcctctgatgtgtcctccac 361
             ||||||| ||||||||| | | ||||||||| |||||||| || ||||||||||||||||
Sbjct: 73419 agttgtgaactgggccagcggtgaagaagaacccgaacatccccctgatgtgtcctccac 73478

                                                                         
Query: 362   acatctcgtgccctgttttagcgcccacatccaatatgccccggacaagttcaccagtga 421
             ||||||| || || ||||| || ||| | |||||||  || || ||||| ||||||||||
Sbjct: 73479 acatctcatgtccagttttcgcacccgcgtccaataccccgcgaacaagatcaccagtga 73538

                    
Query: 422   ccttgtc 428
              ||||||
Sbjct: 73539 tcttgtc 73545



to top

>dbj|AK104694.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H12, full
            insert sequence
          Length = 1575

 Score =  244 bits (123), Expect = 2e-61
 Identities = 261/307 (85%)
 Strand = Plus / Minus

                                                                        
Query: 122  tctatatccatcgaagaaccttctcggcagcctccacggttttctcaatgtcttgggtgg 181
            |||||||||  |||||||| ||| | || |||||||||||||| || ||||| |||| ||
Sbjct: 1463 tctatatccggcgaagaactttcgcagctgcctccacggttttttcgatgtcctgggagg 1404

                                                                        
Query: 182  tgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttctt 241
            ||||||||||||| || ||||||||||| ||||||||||| || || ||||| |||||||
Sbjct: 1403 tgtgtgccaagctggtgaaacctgcctcaaactgggatggagctaggtacacaccttctt 1344

                                                                        
Query: 242  ccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatcatcaa 301
            | ||||| || |||| ||||||||||||||| || |||||||||||||| || ||| |||
Sbjct: 1343 caagcatgccccggtagaacctcccaaacttggcggtgtcactcttcttcgcgtcaccaa 1284

                                                                        
Query: 302  agttgtgcactgggccacctgcgaagaagaatccgaacatgcctctgatgtgtcctccac 361
            ||||||| ||||||||| | | ||||||||| |||||||| || ||||||||||||||||
Sbjct: 1283 agttgtgaactgggccagcggtgaagaagaacccgaacatccccctgatgtgtcctccac 1224

                                                                        
Query: 362  acatctcgtgccctgttttagcgcccacatccaatatgccccggacaagttcaccagtga 421
            ||||||| || || ||||| || ||| | |||||||  || || ||||| ||||||||||
Sbjct: 1223 acatctcatgtccagttttcgcacccgcgtccaataccccgcgaacaagatcaccagtga 1164

                   
Query: 422  ccttgtc 428
             ||||||
Sbjct: 1163 tcttgtc 1157



to top

>dbj|AK064826.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F06, full
            insert sequence
          Length = 1719

 Score =  244 bits (123), Expect = 2e-61
 Identities = 261/307 (85%)
 Strand = Plus / Minus

                                                                        
Query: 122  tctatatccatcgaagaaccttctcggcagcctccacggttttctcaatgtcttgggtgg 181
            |||||||||  |||||||| ||| | || |||||||||||||| || ||||| |||| ||
Sbjct: 1520 tctatatccggcgaagaactttcgcagctgcctccacggttttttcgatgtcctgggagg 1461

                                                                        
Query: 182  tgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttctt 241
            ||||||||||||| || ||||||||||| ||||||||||| || || ||||| |||||||
Sbjct: 1460 tgtgtgccaagctggtgaaacctgcctcaaactgggatggagctaggtacacaccttctt 1401

                                                                        
Query: 242  ccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatcatcaa 301
            | ||||| || |||| ||||||||||||||| || |||||||||||||| || ||| |||
Sbjct: 1400 caagcatgccccggtagaacctcccaaacttggcggtgtcactcttcttcgcgtcaccaa 1341

                                                                        
Query: 302  agttgtgcactgggccacctgcgaagaagaatccgaacatgcctctgatgtgtcctccac 361
            ||||||| ||||||||| | | ||||||||| |||||||| || ||||||||||||||||
Sbjct: 1340 agttgtgaactgggccagcggtgaagaagaacccgaacatccccctgatgtgtcctccac 1281

                                                                        
Query: 362  acatctcgtgccctgttttagcgcccacatccaatatgccccggacaagttcaccagtga 421
            ||||||| || || ||||| || ||| | |||||||  || || ||||| ||||||||||
Sbjct: 1280 acatctcatgtccagttttcgcacccgcgtccaataccccgcgaacaagatcaccagtga 1221

                   
Query: 422  ccttgtc 428
             ||||||
Sbjct: 1220 tcttgtc 1214



to top

>gb|AY112534.1| Zea mays CL13295_1 mRNA sequence
          Length = 629

 Score =  153 bits (77), Expect = 6e-34
 Identities = 239/293 (81%)
 Strand = Plus / Plus

                                                                       
Query: 136 agaaccttctcggcagcctccacggttttctcaatgtcttgggtggtgtgtgccaagctt 195
           ||||||||||| || ||||| ||||| ||||| ||||| |||| |||||| |||||||| 
Sbjct: 240 agaaccttctcagcggcctcgacggtcttctcgatgtcctgggaggtgtgcgccaagctg 299

                                                                       
Query: 196 gtaaaacctgcctcgaactgggatggtgccagatacacgccttcttccagcattccacgg 255
           || || || ||||||||||| ||||| || |  |||||||| || |||||||| ||||||
Sbjct: 300 gtgaaccccgcctcgaactgcgatggagcgaagtacacgccctcctccagcatgccacgg 359

                                                                       
Query: 256 tggaacctcccaaacttcgctgtgtcactcttcttggcatcatcaaagttgtgcactggg 315
           | ||||||||| |||||| | ||||| ||||||||||| ||  | || ||||| || || 
Sbjct: 360 tagaacctcccgaacttctcggtgtcgctcttcttggcgtccccgaaattgtggacgggc 419

                                                                       
Query: 316 ccacctgcgaagaagaatccgaacatgcctctgatgtgtcctccacacatctcgtgccct 375
           || || | ||||||||| || ||||| |||||||| |||||||| |||||||| ||||||
Sbjct: 420 ccgccggtgaagaagaagccaaacattcctctgatatgtcctccgcacatctcatgccct 479

                                                                
Query: 376 gttttagcgcccacatccaatatgccccggacaagttcaccagtgaccttgtc 428
           | ||| || || || |||| ||| || ||||| ||||| || |||| ||||||
Sbjct: 480 gctttcgcaccgacgtccagtatcccacggacgagttcgccggtgatcttgtc 532



to top

>dbj|D29706.2|RICYK18 Oryza sativa mRNA, partial homologous to glutamate
           1-semialdehyde-aminotransferase gene
          Length = 354

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 108/127 (85%), Gaps = 1/127 (0%)
 Strand = Plus / Minus

                                                                       
Query: 122 tctatatccatcgaagaaccttctcggcagcctccacggttttctcaatgtcttgggtgg 181
           |||||||||  |||||||| ||| | || |||||||||||||| || ||||| |||| ||
Sbjct: 173 tctatatccggcgaagaactttcgcagctgcctccacggttttttcgatgtcctgggagg 114

                                                                       
Query: 182 tgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttctt 241
           ||||||||||||| ||  |||||||||| ||||||||||| || || ||||| |||||||
Sbjct: 113 tgtgtgccaagctggt-gaacctgcctcaaactgggatggagctaggtacacaccttctt 55

                  
Query: 242 ccagcat 248
           | |||||
Sbjct: 54  caagcat 48



to top

>ref|NM_114732.3| Arabidopsis thaliana glutamate-1-semialdehyde 2,1-aminomutase/
            pyridoxal phosphate binding / transaminase AT3G48730
            mRNA, complete cds
          Length = 1645

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                        
Query: 181  gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 240
            ||||| |||||||| |||||||| |||||||| || || |||||||  || || ||||||
Sbjct: 1435 gtgtgagccaagctagtaaaaccggcctcgaattgagaaggtgccaagtagacaccttct 1376

                                                                    
Query: 241  tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 296
            |||| |||||| | |   ||| | ||||||||| |||| ||||||||||| |||||
Sbjct: 1375 tccaacattcctctgaaaaactttccaaacttctctgtatcactcttctttgcatc 1320



to top

>gb|BT025324.1| Arabidopsis thaliana At3g48730 mRNA, complete cds
          Length = 1419

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                        
Query: 181  gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 240
            ||||| |||||||| |||||||| |||||||| || || |||||||  || || ||||||
Sbjct: 1361 gtgtgagccaagctagtaaaaccggcctcgaattgagaaggtgccaagtagacaccttct 1302

                                                                    
Query: 241  tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 296
            |||| |||||| | |   ||| | ||||||||| |||| ||||||||||| |||||
Sbjct: 1301 tccaacattcctctgaaaaactttccaaacttctctgtatcactcttctttgcatc 1246



to top

>emb|AL133315.1|ATT8P19 Arabidopsis thaliana DNA chromosome 3, BAC clone T8P19
          Length = 96679

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                         
Query: 181   gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 240
             ||||| |||||||| |||||||| |||||||| || || |||||||  || || ||||||
Sbjct: 87047 gtgtgagccaagctagtaaaaccggcctcgaattgagaaggtgccaagtagacaccttct 86988

                                                                     
Query: 241   tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 296
             |||| |||||| | |   ||| | ||||||||| |||| ||||||||||| |||||
Sbjct: 86987 tccaacattcctctgaaaaactttccaaacttctctgtatcactcttctttgcatc 86932



to top

>emb|BX824602.1|CNS0A5PJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH59ZG05 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1512

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                        
Query: 181  gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 240
            ||||| |||||||| |||||||| |||||||| || || |||||||  || || ||||||
Sbjct: 1398 gtgtgagccaagctagtaaaaccggcctcgaattgagaaggtgccaagtagacaccttct 1339

                                                                    
Query: 241  tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 296
            |||| |||||| | |   ||| | ||||||||| |||| ||||||||||| |||||
Sbjct: 1338 tccaacattcctctgaaaaactttccaaacttctctgtatcactcttctttgcatc 1283



to top

>emb|BX842127.1|CNS09YB6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS33ZA01 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1514

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                        
Query: 181  gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 240
            ||||| |||||||| |||||||| |||||||| || || |||||||  || || ||||||
Sbjct: 1337 gtgtgagccaagctagtaaaaccggcctcgaattgagaaggtgccaagtagacaccttct 1278

                                                                    
Query: 241  tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 296
            |||| |||||| | |   ||| | ||||||||| |||| ||||||||||| |||||
Sbjct: 1277 tccaacattcctctgaaaaactttccaaacttctctgtatcactcttctttgcatc 1222



to top

>gb|U10278.1|ATU10278 Arabidopsis thaliana Columbia glutamate-1-semialdehyde
            aminotransferase (gsa2) gene, complete cds
          Length = 2416

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                        
Query: 181  gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 240
            ||||| |||||||| |||||||| |||||||| || || |||||||  || || ||||||
Sbjct: 2201 gtgtgagccaagctagtaaaaccggcctcgaattgagaaggtgccaagtagacaccttct 2142

                                                                    
Query: 241  tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 296
            |||| |||||| | |   ||| | ||||||||| |||| ||||||||||| |||||
Sbjct: 2141 tccaacattcctctgaaaaactttccaaacttctctgtatcactcttctttgcatc 2086



to top

>emb|X65974.1|NTGSAMR2 N.tabacum mRNA for glutamate-1-semialdehyde aminotransferase
          Length = 1715

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                        
Query: 181  gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 240
            |||||||| ||||| ||||| || ||||| ||||| |||||||| | ||| || ||||| 
Sbjct: 1483 gtgtgtgctaagctagtaaatccagcctcaaactgtgatggtgcaaaatatacaccttcc 1424

                                                                    
Query: 241  tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 296
            ||||||||||| |  | ||| || ||||| ||  |||| ||||||||||| |||||
Sbjct: 1423 tccagcattcccctatagaatctgccaaatttttctgtatcactcttctttgcatc 1368



to top

>emb|X65973.1|NTGSAMR1 N.tabacum mRNA for glutamate-1-semialdehyde aminotransferase
          Length = 1733

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                        
Query: 181  gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 240
            |||||||| ||||| ||||| || ||||| ||||| |||||||| | ||| || ||||| 
Sbjct: 1489 gtgtgtgctaagctagtaaatccagcctcaaactgtgatggtgcaaaatatacaccttcc 1430

                                                                    
Query: 241  tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 296
            ||||||||||| |  | ||| || ||||| ||  |||| ||||||||||| |||||
Sbjct: 1429 tccagcattcccctatagaatctgccaaatttttctgtatcactcttctttgcatc 1374



to top

>gb|AF366293.1| Brassica napus glutamate 1-semialdehyde aminotransferase (Gsa) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1651

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                        
Query: 181  gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 240
            ||||| |||||||| ||||| || || || ||||| || ||||| |  || || ||||||
Sbjct: 1415 gtgtgagccaagctagtaaacccagcttcaaactgagagggtgcaaagtaaacaccttct 1356

                                                                    
Query: 241  tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 296
            |||| |||||| | |  |||||| ||||||||| | ||||| ||||||||||||||
Sbjct: 1355 tccaacattcccctgaagaacctaccaaacttctccgtgtcgctcttcttggcatc 1300



to top

>gb|AF364595.1| Brassica napus glutamate 1-semialdehyde aminotransferase enzyme mRNA,
            complete cds; chloroplast gene for chloroplast product
          Length = 1695

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 127/161 (78%)
 Strand = Plus / Minus

                                                                        
Query: 181  gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 240
            ||||| |||||||| ||||| || ||||||||||| || ||||| |  || || ||||| 
Sbjct: 1433 gtgtgagccaagctagtaaacccagcctcgaactgagacggtgcaaagtaaacaccttcc 1374

                                                                        
Query: 241  tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatcatca 300
            |||| |||||| | |   ||| | ||||||||| | || || ||||||||||| ||| ||
Sbjct: 1373 tccaacattcctctgaaaaacttaccaaacttctccgtatcgctcttcttggcgtcagca 1314

                                                     
Query: 301  aagttgtgcactgggccacctgcgaagaagaatccgaacat 341
            ||||||| ||| || ||  | ||||| ||||| ||||||||
Sbjct: 1313 aagttgtacaccggaccttcagcgaaaaagaaaccgaacat 1273



to top

>gb|U20260.1|GMU20260 Glycine max glutamate 1-semialdehyde aminotransferase (Gsa1) gene,
            complete cds
          Length = 1974

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 91/113 (80%)
 Strand = Plus / Minus

                                                                        
Query: 184  tgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttcttcc 243
            ||||||||||| || || || ||||| |||||||| ||||||| ||| || |||||  ||
Sbjct: 1731 tgtgccaagctggtgaagccagcctcaaactgggaaggtgccaaatagacaccttccgcc 1672

                                                                 
Query: 244  agcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 296
            |||||||| |    ||||||  ||||||| || || |||||||| ||||||||
Sbjct: 1671 agcattccccaaaagaacctagcaaacttggccgtatcactctttttggcatc 1619



to top

>gb|L12453.1|SOYGSA Soybean glutamate 1-semialdehyde aminotransferase mRNA, complete cds
          Length = 1822

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 91/113 (80%)
 Strand = Plus / Minus

                                                                        
Query: 184  tgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttcttcc 243
            ||||||||||| || || || ||||| |||||||| ||||||| ||| || |||||  ||
Sbjct: 1405 tgtgccaagctggtgaagccagcctcaaactgggaaggtgccaaatagacaccttccgcc 1346

                                                                 
Query: 244  agcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 296
            |||||||| |    ||||||  ||||||| || || |||||||| ||||||||
Sbjct: 1345 agcattccccaaaagaacctagcaaacttggccgtatcactctttttggcatc 1293



to top

>emb|AL627265.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
              complete chromosome; segment 1/20
          Length = 251050

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 217    gatggtgccagatacacgccttcttccagcat 248
              ||||| ||||||||||||||||| ||||||||
Sbjct: 234313 gatggcgccagatacacgccttcctccagcat 234344



to top

>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 217    gatggtgccagatacacgccttcttccagcat 248
              ||||| ||||||||||||||||| ||||||||
Sbjct: 234304 gatggcgccagatacacgccttcctccagcat 234335



to top

>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 334    ccgaacatgcctctgatgtgtcctccacacatctcgtg 371
              ||||||||||| |||||||| || ||||||| ||||||
Sbjct: 475747 ccgaacatgccactgatgtgcccaccacacacctcgtg 475710



to top

>gb|AE017128.1| Yersinia pestis biovar Medievalis str. 91001 section 2 of 16 of the
             complete genome
          Length = 290803

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 220   ggtgccagatacacgccttcttccagcat 248
             ||||||||||| || ||||||||||||||
Sbjct: 17522 ggtgccagatagaccccttcttccagcat 17550



to top

>gb|AF404302.1| Capra hircus sex-specific gonadal PISRT1 mRNA, complete sequence
          Length = 48420

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 32   aaaatacaatacaaaactaaa 52
            |||||||||||||||||||||
Sbjct: 6964 aaaatacaatacaaaactaaa 6944



to top

>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 220    ggtgccagatacacgccttcttccagcat 248
              ||||||||||| || ||||||||||||||
Sbjct: 894824 ggtgccagatagaccccttcttccagcat 894852



to top

>ref|XM_451426.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A09757g predicted mRNA
          Length = 594

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 6  gagacaagatactgctgctgc 26
          |||||||||||||||||||||
Sbjct: 60 gagacaagatactgctgctgc 80



to top

>gb|AC133099.3| Mus musculus BAC clone RP23-90K8 from chromosome 19, complete sequence
          Length = 224638

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 29     aacaaaatacaatacaaaactaaac 53
              |||||||||||||||||||| ||||
Sbjct: 136220 aacaaaatacaatacaaaacaaaac 136244



to top

>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1062590

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 6      gagacaagatactgctgctgc 26
              |||||||||||||||||||||
Sbjct: 855940 gagacaagatactgctgctgc 855920



to top

>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 220    ggtgccagatacacgccttcttccagcat 248
              ||||||||||| || ||||||||||||||
Sbjct: 892378 ggtgccagatagaccccttcttccagcat 892406



to top

>emb|AJ414156.1| Yersinia pestis strain CO92 complete genome; segment 16/20
          Length = 220050

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 220    ggtgccagatacacgccttcttccagcat 248
              ||||||||||| || ||||||||||||||
Sbjct: 203732 ggtgccagatagaccccttcttccagcat 203704



to top

>gb|AC092248.1|AC092248 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone
              BACR37K07, complete sequence
          Length = 157722

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 31     caaaatacaatacaaaactaa 51
              |||||||||||||||||||||
Sbjct: 144141 caaaatacaatacaaaactaa 144161



to top

>gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone
             BACR21J17, complete sequence
          Length = 174974

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 31    caaaatacaatacaaaactaa 51
             |||||||||||||||||||||
Sbjct: 23560 caaaatacaatacaaaactaa 23580



to top

>gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52 of 83 of the complete
              sequence
          Length = 236144

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 31     caaaatacaatacaaaactaa 51
              |||||||||||||||||||||
Sbjct: 151484 caaaatacaatacaaaactaa 151504



to top

>gb|AC111074.4| Mus musculus chromosome 1, clone RP24-390A1, complete sequence
          Length = 124758

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 72    aacagaatacaacagaaggaaaag 95
             |||||||||||||||| |||||||
Sbjct: 59231 aacagaatacaacagatggaaaag 59254



to top

>gb|AF337025.1| Aphidius ervi clone 76 microsatellite sequence
          Length = 752

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  caacaaaatacaatacaaaa 47
           ||||||||||||||||||||
Sbjct: 617 caacaaaatacaatacaaaa 598



to top

>gb|AF336994.1| Aphidius ervi clone 74 microsatellite sequence
          Length = 720

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  caacaaaatacaatacaaaa 47
           ||||||||||||||||||||
Sbjct: 614 caacaaaatacaatacaaaa 595



to top

>ref|XM_461671.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G03432g)
            partial mRNA
          Length = 6618

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 91   aaaagcttcaaaaggtttgc 110
            ||||||||||||||||||||
Sbjct: 2536 aaaagcttcaaaaggtttgc 2555



to top

>gb|AC134552.4| Mus musculus BAC clone RP24-279K10 from chromosome 8, complete sequence
          Length = 154774

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    actaacagaatacaacagaaggaa 92
             ||||||||||||||||||| ||||
Sbjct: 72819 actaacagaatacaacagatggaa 72842



to top

>gb|BT013916.1| Lycopersicon esculentum clone 132913F, mRNA sequence
          Length = 1637

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 92/116 (79%)
 Strand = Plus / Minus

                                                                        
Query: 181  gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 240
            |||||||| ||||| ||||| || ||||| ||||| |||||||| |  || || ||||| 
Sbjct: 1472 gtgtgtgctaagctagtaaatccagcctcaaactgtgatggtgcaaagtaaacaccttcc 1413

                                                                    
Query: 241  tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 296
            |||||||| || |  | ||| || ||||| ||  |||| ||||||||||| |||||
Sbjct: 1412 tccagcatccctctatagaatctgccaaatttttctgtatcactcttctttgcatc 1357



to top

>gb|AC009600.20| Homo sapiens 2 BAC RP11-436K12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 217304

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     tcagccacgtacaaactaac 74
              ||||||||||||||||||||
Sbjct: 132181 tcagccacgtacaaactaac 132162



to top

>gb|AC122905.3| Mus musculus BAC clone RP23-47A1 from 10, complete sequence
          Length = 152690

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    aaaatacaatacaaaactaa 51
             ||||||||||||||||||||
Sbjct: 36308 aaaatacaatacaaaactaa 36289



to top

>gb|AC151744.23| Medicago truncatula clone mth2-32k10, complete sequence
          Length = 110897

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    tgcacaacaaaatacaatac 43
             ||||||||||||||||||||
Sbjct: 22874 tgcacaacaaaatacaatac 22855



to top

>emb|AL162493.21| Human DNA sequence from clone RP11-120L14 on chromosome 13, complete
              sequence
          Length = 158083

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     caaaatacaatacaaaacta 50
              ||||||||||||||||||||
Sbjct: 120819 caaaatacaatacaaaacta 120800



to top

>emb|CR933103.10| Zebrafish DNA sequence from clone CH211-147G15 in linkage group 8,
              complete sequence
          Length = 147936

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     aacaaaatacaatacaaaac 48
              ||||||||||||||||||||
Sbjct: 118571 aacaaaatacaatacaaaac 118552



to top

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     ctgctgcacaacaaaataca 39
              ||||||||||||||||||||
Sbjct: 744838 ctgctgcacaacaaaataca 744857



to top

>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces
              hansenii
          Length = 2051428

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     aaaagcttcaaaaggtttgc 110
              ||||||||||||||||||||
Sbjct: 253805 aaaagcttcaaaaggtttgc 253824



to top

>emb|AL603793.4| Mouse DNA sequence from clone RP23-131A14 on chromosome 11, complete
             sequence
          Length = 201815

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 72    aacagaatacaacagaaggaaaag 95
             |||||||||||||||| |||||||
Sbjct: 51642 aacagaatacaacagatggaaaag 51619



to top

>emb|BX629343.11| Zebrafish DNA sequence from clone DKEY-66M17 in linkage group 13,
             complete sequence
          Length = 207677

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 20    ctgctgcacaacaaaatacaatacaaaa 47
             |||||||||||||||| ||||| |||||
Sbjct: 16971 ctgctgcacaacaaaacacaatgcaaaa 16998



to top

>gb|AF411807.1| Lycopersicon esculentum BAC clone Clemson_Id 127E11, complete sequence
          Length = 95845

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 92/116 (79%)
 Strand = Plus / Plus

                                                                         
Query: 181   gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 240
             |||||||| ||||| ||||| || ||||| ||||| |||||||| |  || || ||||| 
Sbjct: 87252 gtgtgtgctaagctagtaaatccagcctcaaactgtgatggtgcaaagtaaacaccttcc 87311

                                                                     
Query: 241   tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 296
             |||||||| || |  | ||| || ||||| ||  |||| ||||||||||| |||||
Sbjct: 87312 tccagcatccctctatagaatctgccaaatttttctgtatcactcttctttgcatc 87367



to top

>gb|AC093432.2| Homo sapiens chromosome 1 clone RP11-136D19, complete sequence
          Length = 174520

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 283    ctcttcttggcatcatcaaa 302
              ||||||||||||||||||||
Sbjct: 133510 ctcttcttggcatcatcaaa 133491



to top

>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 137     gaaccttctcggcagcctcc 156
               ||||||||||||||||||||
Sbjct: 1682005 gaaccttctcggcagcctcc 1681986



to top

>gb|AC025750.10| Homo sapiens BAC clone RP11-804P20 from 2, complete sequence
          Length = 151367

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   tcttcttggcatcatcaaag 303
             ||||||||||||||||||||
Sbjct: 76577 tcttcttggcatcatcaaag 76558



to top

>gb|AC138655.1| Homo sapiens BAC clone RP11-436K12 from 2, complete sequence
          Length = 139150

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    tcagccacgtacaaactaac 74
             ||||||||||||||||||||
Sbjct: 54028 tcagccacgtacaaactaac 54009



to top

>gb|AC093756.3| Homo sapiens BAC clone RP11-56A1 from 2, complete sequence
          Length = 158073

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 210    gaactgggatggtgccagat 229
              ||||||||||||||||||||
Sbjct: 133577 gaactgggatggtgccagat 133596



to top

>gb|AC148974.5| Mus musculus BAC clone RP24-165K23 from chromosome y, complete sequence
          Length = 200783

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 72     aacagaatacaacagaaggaaaag 95
              |||||||||||||||| |||||||
Sbjct: 116333 aacagaatacaacagatggaaaag 116310



to top

>emb|BX469897.6| Zebrafish DNA sequence from clone CH211-39F22 in linkage group 4,
              complete sequence
          Length = 186500

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     caacaaaatacaatacaaaa 47
              ||||||||||||||||||||
Sbjct: 174828 caacaaaatacaatacaaaa 174809



to top

>emb|CT573025.12| Mouse DNA sequence from clone RP23-36H17 on chromosome 14, complete
             sequence
          Length = 116550

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 72    aacagaatacaacagaaggaaaag 95
             |||||||||||| |||||||||||
Sbjct: 28082 aacagaatacaaaagaaggaaaag 28059



to top

>gb|AC154698.2| Mus musculus BAC clone RP23-137A20 from 14, complete sequence
          Length = 197874

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 72    aacagaatacaacagaaggaaaag 95
             |||||||||||| |||||||||||
Sbjct: 45302 aacagaatacaaaagaaggaaaag 45325



to top

>gb|AC117231.4| Mus musculus BAC clone RP23-394M5 from 8, complete sequence
          Length = 195936

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     ctagagacaagatactgctg 22
             ||||||||||||||||||||
Sbjct: 92460 ctagagacaagatactgctg 92479



to top

>emb|BX511192.4| Zebrafish DNA sequence from clone DKEYP-89C11 in linkage group 4,
             complete sequence
          Length = 154256

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    cacaacaaaatacaatacaaaact 49
             ||||| ||||||||||||||||||
Sbjct: 77522 cacaataaaatacaatacaaaact 77499



to top

>dbj|AP000757.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-728F11, complete
              sequences
          Length = 184926

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     ctgctgctgcacaacaaaat 36
              ||||||||||||||||||||
Sbjct: 129318 ctgctgctgcacaacaaaat 129299



to top

>gb|AC125369.4| Mus musculus BAC clone RP24-380D10 from 8, complete sequence
          Length = 169338

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 72     aacagaatacaacagaaggaaaag 95
              |||||||||||| |||||||||||
Sbjct: 126262 aacagaatacaagagaaggaaaag 126285



to top

>gb|AC134435.3| Mus musculus BAC clone RP24-423J19 from 1, complete sequence
          Length = 225687

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 72    aacagaatacaacagaaggaaaag 95
             |||||||||||||||| |||||||
Sbjct: 82888 aacagaatacaacagatggaaaag 82865



to top

>gb|AC131685.4| Mus musculus BAC clone RP23-372G24 from 1, complete sequence
          Length = 163474

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 72    aacagaatacaacagaaggaaaag 95
             |||||||||||||||| |||||||
Sbjct: 95298 aacagaatacaacagatggaaaag 95275



to top

>emb|AL844863.7| Mouse DNA sequence from clone RP23-273C23 on chromosome X, complete
             sequence
          Length = 143387

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    aacaaaatacaatacaaaactaaa 52
             |||||||||||| |||||||||||
Sbjct: 42533 aacaaaatacaaaacaaaactaaa 42510



to top

>emb|AL683881.12| Mouse DNA sequence from clone RP23-10M6 on chromosome 2, complete
              sequence
          Length = 155168

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     aacaaaatacaatacaaaac 48
              ||||||||||||||||||||
Sbjct: 154728 aacaaaatacaatacaaaac 154709



to top

>gb|L39279.1|TOMGSAAM Lycopersicon esculentum (clone GFPGSAAM) glutamate 1-semialdehyde
            2,1-aminomutase mRNA, complete cds
          Length = 1664

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 92/116 (79%)
 Strand = Plus / Minus

                                                                        
Query: 181  gtgtgtgccaagcttgtaaaacctgcctcgaactgggatggtgccagatacacgccttct 240
            |||||||| ||||| ||||| || ||||| ||||| |||||||| |  || || ||||| 
Sbjct: 1412 gtgtgtgctaagctagtaaatccagcctcaaactgtgatggtgcaaagtaaacaccttcc 1353

                                                                    
Query: 241  tccagcattccacggtggaacctcccaaacttcgctgtgtcactcttcttggcatc 296
            |||||||| || |  | ||| || ||||| ||  |||| ||||||||||| |||||
Sbjct: 1352 tccagcatccctctatagaatctgccaaatttttctgtatcactcttctttgcatc 1297



to top

>emb|AL713871.8| Mouse DNA sequence from clone RP23-40P1 on chromosome X, complete
             sequence
          Length = 230701

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 72    aacagaatacaacagaaggaaaag 95
             ||||||||||||||| ||||||||
Sbjct: 33948 aacagaatacaacaggaggaaaag 33925



to top

>emb|AL844493.6| Mouse DNA sequence from clone RP23-396G18 on chromosome 2, complete
            sequence
          Length = 166025

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   aacaaaatacaatacaaaac 48
            ||||||||||||||||||||
Sbjct: 1560 aacaaaatacaatacaaaac 1541



to top

>gb|U03632.1|CRU03632 Chlamydomonas reinhardtii NO- glutamate-1-semialdehyde
            aminotransferase (gsa) mRNA, complete cds
          Length = 2002

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 205  gcctcgaactgggatggtgccagatacacgccttcttccagcattccacggtggaa 260
            ||||||||||| || || ||||| || ||||| || |||||||| || ||||||||
Sbjct: 1329 gcctcgaactgcgagggagccaggtagacgccctcctccagcatgccgcggtggaa 1274


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,166,032
Number of Sequences: 3902068
Number of extensions: 4166032
Number of successful extensions: 82513
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 82284
Number of HSP's gapped (non-prelim): 228
length of query: 428
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 406
effective length of database: 17,147,199,772
effective search space: 6961763107432
effective search space used: 6961763107432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top