ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaet21c10 |
|---|---|
| Clone Library Name | barley_pub |
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 162 bits (409), Expect = 4e-40 Identities = 79/79 (100%), Positives = 79/79 (100%) Frame = -3 Query: 411 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSE 232 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSE Sbjct: 347 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSE 406 Query: 231 AALGQANDDAMKTGAFYGK 175 AALGQANDDAMKTGAFYGK Sbjct: 407 AALGQANDDAMKTGAFYGK 425
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 137 bits (346), Expect = 7e-33 Identities = 63/79 (79%), Positives = 72/79 (91%) Frame = -3 Query: 411 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSE 232 WVG G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+ Sbjct: 350 WVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQ 409 Query: 231 AALGQANDDAMKTGAFYGK 175 AALG AN DAMKTG+FYGK Sbjct: 410 AALGDANQDAMKTGSFYGK 428
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 135 bits (341), Expect = 3e-32 Identities = 62/77 (80%), Positives = 74/77 (96%) Frame = -3 Query: 411 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSE 232 WV E GVENI+++LVNS+EGPPTF+QPK+TIEKL+EYGHMLV EQENVKRVQLADKYL+E Sbjct: 356 WVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNE 415 Query: 231 AALGQANDDAMKTGAFY 181 AALG+AN+DAMKTG+F+ Sbjct: 416 AALGEANEDAMKTGSFF 432
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 135 bits (340), Expect = 4e-32 Identities = 64/78 (82%), Positives = 72/78 (92%) Frame = -3 Query: 411 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSE 232 WV + GVENI KRLVNSREGPP F+QPKMTIEKL+EYG+MLV+EQENVKRVQLA++YLSE Sbjct: 350 WVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSE 409 Query: 231 AALGQANDDAMKTGAFYG 178 AALG AN DAMKTG+FYG Sbjct: 410 AALGDANSDAMKTGSFYG 427
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 133 bits (335), Expect = 1e-31 Identities = 62/78 (79%), Positives = 71/78 (91%) Frame = -3 Query: 411 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSE 232 W+ +GV++I K+LVNS+EGPPTF+QPKMTIEKL+EYG+MLVQEQENVKRVQLADKYLSE Sbjct: 360 WITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSE 419 Query: 231 AALGQANDDAMKTGAFYG 178 AALG AN DAM TG FYG Sbjct: 420 AALGDANSDAMNTGTFYG 437
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 128 bits (321), Expect = 6e-30 Identities = 59/78 (75%), Positives = 70/78 (89%) Frame = -3 Query: 411 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSE 232 WV E+GV+ I K+LVNS+EGPP+F+QPKMTI+KL+ YG MLVQEQENVKRVQLADKY+SE Sbjct: 360 WVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSE 419 Query: 231 AALGQANDDAMKTGAFYG 178 AALG AN+DA+K G FYG Sbjct: 420 AALGDANNDAIKRGTFYG 437
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 125 bits (315), Expect = 3e-29 Identities = 57/76 (75%), Positives = 69/76 (90%) Frame = -3 Query: 411 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSE 232 WV E+GV+ I K+LVNS+EGPPTF+QPKMTI+KL++YG+MLV+EQENVKRVQLADKY+SE Sbjct: 360 WVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSE 419 Query: 231 AALGQANDDAMKTGAF 184 AALG AN DA+K G F Sbjct: 420 AALGDANQDAIKRGTF 435
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 123 bits (308), Expect = 2e-28 Identities = 54/77 (70%), Positives = 71/77 (92%) Frame = -3 Query: 411 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSE 232 W+ +GV+ K+LVNS+EGPPTFDQPKM+++KL++YG+MLVQEQENVKRVQLADKYL+E Sbjct: 362 WISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNE 421 Query: 231 AALGQANDDAMKTGAFY 181 AALG AN+DA+K+G+F+ Sbjct: 422 AALGNANEDAIKSGSFF 438
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 123 bits (308), Expect = 2e-28 Identities = 54/79 (68%), Positives = 69/79 (87%) Frame = -3 Query: 411 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSE 232 WV +GV+N+ K+LVNS++GPP F+QP+MT++KLMEYG+MLVQEQENVKRVQLAD+Y+S Sbjct: 358 WVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSS 417 Query: 231 AALGQANDDAMKTGAFYGK 175 AALG AN DA+ G F+GK Sbjct: 418 AALGDANKDAIDRGTFFGK 436
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 120 bits (302), Expect = 9e-28 Identities = 53/77 (68%), Positives = 70/77 (90%) Frame = -3 Query: 411 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSE 232 W+ +GV+++ K+LVNS+EGPPTFDQPKMT++KL+ Y MLVQEQENVKRVQLAD+YL+E Sbjct: 364 WISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNE 423 Query: 231 AALGQANDDAMKTGAFY 181 AALG AN+DA+K+G+F+ Sbjct: 424 AALGNANEDAIKSGSFF 440
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 119 bits (297), Expect = 4e-27 Identities = 58/79 (73%), Positives = 66/79 (83%) Frame = -3 Query: 411 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSE 232 +V +GVE I KRLVNSREGPP F+QP+MT EKLMEYG+MLV EQENVKRVQLA+ YLS+ Sbjct: 360 FVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQ 419 Query: 231 AALGQANDDAMKTGAFYGK 175 AALG AN DA+ G FYGK Sbjct: 420 AALGDANADAIGRGTFYGK 438
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 117 bits (294), Expect = 8e-27 Identities = 55/77 (71%), Positives = 65/77 (84%) Frame = -3 Query: 411 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSE 232 WV G+E I +L+NS +GPPTF+QPKMTIEKL+EYG+MLVQEQENVKRVQLADKYL E Sbjct: 364 WVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKE 423 Query: 231 AALGQANDDAMKTGAFY 181 AALG AN DA+ G+F+ Sbjct: 424 AALGDANADAINNGSFF 440
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 114 bits (284), Expect = 1e-25 Identities = 53/74 (71%), Positives = 64/74 (86%) Frame = -3 Query: 411 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSE 232 WV G+E I ++L+NSR+GPPTF+QPKMT+EKL+EYG+MLVQEQENVKRVQLA+ YL E Sbjct: 359 WVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKE 418 Query: 231 AALGQANDDAMKTG 190 AALG AN DA+ TG Sbjct: 419 AALGDANADAINTG 432
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 112 bits (280), Expect = 3e-25 Identities = 53/76 (69%), Positives = 63/76 (82%) Frame = -3 Query: 411 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSE 232 WV G+E I +L+NS +GPPTF+QPKMT+EKL+EYG+MLVQEQENVKRVQLA+ YL E Sbjct: 364 WVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKE 423 Query: 231 AALGQANDDAMKTGAF 184 AALG AN DA+ TG F Sbjct: 424 AALGDANADAINTGNF 439
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 85.1 bits (209), Expect = 6e-17 Identities = 39/53 (73%), Positives = 45/53 (84%) Frame = -3 Query: 411 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQL 253 W +GVE I + LVNS+E PPTFDQPKMTIEKL+EYG+MLV EQENVKRV+L Sbjct: 357 WAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 59.3 bits (142), Expect = 3e-09 Identities = 31/63 (49%), Positives = 42/63 (66%) Frame = -3 Query: 411 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSE 232 W+ + GV+ I ++LVN+R+ + M + L++YG LV EQENVKRVQLAD YLS Sbjct: 333 WITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSG 391 Query: 231 AAL 223 A L Sbjct: 392 AEL 394
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 57.8 bits (138), Expect = 1e-08 Identities = 24/57 (42%), Positives = 39/57 (68%) Frame = -3 Query: 411 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKY 241 ++ ++G EN+S R+VNS EGPP F +P T+ L+E + +V EQ+ ++ QL D+Y Sbjct: 233 FIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 52.4 bits (124), Expect = 4e-07 Identities = 23/57 (40%), Positives = 38/57 (66%) Frame = -3 Query: 411 WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKY 241 ++ ++G E IS R+VNS E PP F +P ++ L+E G++++ EQ+ V QL D+Y Sbjct: 233 FIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast (RuBisCO activase) (RA) (Fragments) Length = 32 Score = 34.7 bits (78), Expect = 0.089 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = -3 Query: 360 REGPPTFDQPKMTIEK 313 REGPPTF+QP MTIEK Sbjct: 17 REGPPTFEQPAMTIEK 32
>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell| protein 0) Length = 532 Score = 32.0 bits (71), Expect = 0.58 Identities = 18/48 (37%), Positives = 22/48 (45%) Frame = -2 Query: 379 QAPRQLQGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQ 236 QAPRQ A RP G RP A PG R++ RR+ P+ Sbjct: 250 QAPRQEDSRPARARPGPPTRGRRRGRRP-AAPGPASRRSARLRRRQPR 296
>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0| Length = 532 Score = 32.0 bits (71), Expect = 0.58 Identities = 18/48 (37%), Positives = 22/48 (45%) Frame = -2 Query: 379 QAPRQLQGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQ 236 QAPRQ A RP G RP A PG R++ RR+ P+ Sbjct: 250 QAPRQEDSRPARARPGPPTRGRRRGRRP-AAPGPASRRSARLRRRQPR 296
>IF2_COREF (Q8FPA7) Translation initiation factor IF-2| Length = 964 Score = 31.6 bits (70), Expect = 0.76 Identities = 24/63 (38%), Positives = 27/63 (42%) Frame = -2 Query: 403 RDRRGEHLQAPRQLQGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQRGGA 224 R + G+ APR QGG RP + G RP G AG A Q Q GG Sbjct: 221 RPQGGQRSGAPRDGQGGPRGQRPGPG----SGGPRPQGGNAAG------AASQERQGGGR 270 Query: 223 RPS 215 RPS Sbjct: 271 RPS 273
>ZDHC1_HUMAN (Q8WTX9) Probable palmitoyltransferase ZDHHC1 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 1) (DHHC-1) (Zinc finger protein 377) (DHHC-domain-containing cysteine-rich protein 1) Length = 485 Score = 31.6 bits (70), Expect = 0.76 Identities = 16/27 (59%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Frame = +3 Query: 330 WAGRTWAAPPWS*RGAWRCSPR-RSRR 407 W R WAAP W RGA SPR R RR Sbjct: 453 WRRRAWAAPLWPPRGAGADSPRWRGRR 479
>DNAA_STRAW (Q82FD8) Chromosomal replication initiator protein dnaA| Length = 653 Score = 29.3 bits (64), Expect = 3.7 Identities = 18/59 (30%), Positives = 24/59 (40%) Frame = -2 Query: 370 RQLQGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQRGGARPSQRRRHED 194 R +G + R DDHR+ H R GPG + P RG P+ R + D Sbjct: 125 RGREGYEGYGRHRADDHRQGHNDRHQGGPG---------DQLPPSRGDQLPTARPAYPD 174
>H1X_HUMAN (Q92522) Histone H1x| Length = 213 Score = 28.5 bits (62), Expect = 6.4 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = +1 Query: 85 ESKSLSGFRVQNSPTYI*CMHAS*VE*DLLLAVEGTGLHG 204 E+K + F QN TY+ + V+ D LL V+GTG +G Sbjct: 73 EAKKVPWFDQQNGRTYLKYSIKALVQNDTLLQVKGTGANG 112
>41_CANFA (Q6Q7P4) Protein 4.1 (Band 4.1) (P4.1) (4.1R)| Length = 810 Score = 28.5 bits (62), Expect = 6.4 Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 21/107 (19%) Frame = -2 Query: 352 AAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQRGGAR---PSQR--RRHED-- 194 +A +PAQ++HRE G G E + + P+ R SQ+ RRH + Sbjct: 153 SAETQPAQEEHREDPDFETKEGGGLEECSKIEVKEESPESKAERELKASQKSIRRHRNMH 212 Query: 193 -----------RCLL-RQVEGPTLLKMHACTIYML--DYFGPEIHSN 95 C++ + +G LLK + +L DYFG I N Sbjct: 213 CKVSLLDDTVYECVVEKHAKGQDLLKRVCEHLNLLEEDYFGLAIWDN 259
>ODO1_STAS1 (Q49XM5) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 933 Score = 28.5 bits (62), Expect = 6.4 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 7/68 (10%) Frame = -3 Query: 405 GEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQ-------EQENVKRVQLAD 247 GE + ++ N +G T + I+ + +YGH+L ++ENV ++ + D Sbjct: 49 GEANIATNTEGQSNVTKGDSTIKRVMRLIDNIRQYGHLLADIYPVNRPQRENVPKLNMED 108 Query: 246 KYLSEAAL 223 L + L Sbjct: 109 FNLDQETL 116
>CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) (Homeobox protein Clox) (Clox-1) (Fragment) Length = 975 Score = 28.5 bits (62), Expect = 6.4 Identities = 28/91 (30%), Positives = 32/91 (35%), Gaps = 18/91 (19%) Frame = -2 Query: 409 GRRDRRGEHLQAPRQLQGGAAHVRPAQDDHREA------HGVRPHA-GPGAGERQA---- 263 G D A + QGG A A ++ EA RP GPG G R Sbjct: 788 GAADAEESAPAAAAKSQGGPAEAAVAPEEREEAPRPAEKRSRRPRGPGPGPGRRGGGGPA 847 Query: 262 -------CAARRQVPQRGGARPSQRRRHEDR 191 AA R +R GAR RRR R Sbjct: 848 PGAPAAPAAAARGPSRRPGARAKPRRRRRRR 878
>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2| Length = 964 Score = 28.1 bits (61), Expect = 8.3 Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 4/76 (5%) Frame = -2 Query: 406 RRDRRGEHLQAPRQLQGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAA----RRQVP 239 R R G + PR G RP D+ G RP G R A AA + P Sbjct: 261 RGPRPGGDNRGPRPAGAGDRGPRPGGDNR----GPRPAGAGDRGPRPAPAAAAPSQPPAP 316 Query: 238 QRGGARPSQRRRHEDR 191 GG+RP + ++ +R Sbjct: 317 APGGSRPGKGKKGGER 332
>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) Length = 699 Score = 28.1 bits (61), Expect = 8.3 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = -2 Query: 307 GVRPHAGPGAGERQACAARRQVPQRGGARPSQRRRHEDRCLLRQVEGP 164 G +P GPG G A + P RGG P R+H + +GP Sbjct: 207 GPKPGGGPGMG---APGGHPKPPHRGGGEPRGGRQHHAPYHQQHHQGP 251
>MYOB_DICDI (P34092) Myosin IB heavy chain| Length = 1111 Score = 28.1 bits (61), Expect = 8.3 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Frame = -2 Query: 373 PRQLQGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVP---QRGGA 224 P+ QGG A P ++ G RP P G A RQ+P Q+GGA Sbjct: 969 PQPQQGGGARPMPQP---QQGGGARPMGAPQQGGAPQQGAGRQLPQPTQQGGA 1018
>RNF31_MOUSE (Q924T7) RING finger protein 31| Length = 1066 Score = 28.1 bits (61), Expect = 8.3 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 Query: 337 VERGRPLPGVDEALGDVLHADLADP 411 +E+GRP PG + LG L A DP Sbjct: 446 LEKGRPKPGSSQHLGSSLPASCGDP 470 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,327,162 Number of Sequences: 219361 Number of extensions: 1086893 Number of successful extensions: 3454 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 3289 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3443 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
