ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet21a04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ006296.1|HVU6296 Hordeum vulgare partial mRNA for chlorophyll a/b-binding protein Length = 470 Score = 781 bits (394), Expect = 0.0 Identities = 418/424 (98%), Gaps = 4/424 (0%) Strand = Plus / Minus Query: 1 gatgtacaagtggatgcatt-gagtcaccattggttcatattttacaaatcaccaagtcc 59 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 456 gatgtacaagtggatccatttgagtcaccattggttcatattttacaaatcaccaagtcc 397 Query: 60 cagcagctctcctatgtgatcggaccagcattataatcaacaaaggatctttgcgatacc 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 cagcagctctcctatgtgatcggaccagcattataatcaacaaaggatctttgcgatacc 337 Query: 120 ctctcatccatcactcgtcatacaaaaccaaagcacgttcgttacacggacgcgcgttcg 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 336 ctctcatccatcactcgtcatacaaaaccaaagcacgttcgttacacggacgcgcgttcg 277 Query: 180 tccattttgcagctgagctgacagaaactgctcgaccaccgaccacttaagaggagccga 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 tccattttgcagctgagctgacagaaactgctcgaccaccgaccacttaagaggagccga 217 Query: 240 aggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgagcg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 aggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgagcg 157 Query: 300 gacccttgccggt---ggcggcctgcacggcgaagccgaggaaggcgaccatggcgaggc 356 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 156 gacccttgccggtggcggcggcctgcaccgcgaagccgaggaaggcgaccatggcgaggc 97 Query: 357 gggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgagtc 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 gggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgcgagtc 37 Query: 417 ccag 420 |||| Sbjct: 36 ccag 33
>ref|XM_507368.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1156 Score = 268 bits (135), Expect = 1e-68 Identities = 164/173 (94%), Gaps = 3/173 (1%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 902 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 843 Query: 298 cggacccttgccggtggcggc---ctgcacggcgaagccgaggaaggcgaccatggcgag 354 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 842 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 783 Query: 355 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccg 407 |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 782 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccg 730 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gatgtacaagtggatgcatt 20 |||||||||||||||||||| Sbjct: 1156 gatgtacaagtggatgcatt 1137
>ref|XM_478692.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1152 Score = 268 bits (135), Expect = 1e-68 Identities = 164/173 (94%), Gaps = 3/173 (1%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 897 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 838 Query: 298 cggacccttgccggtggcggc---ctgcacggcgaagccgaggaaggcgaccatggcgag 354 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 837 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 778 Query: 355 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccg 407 |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 777 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccg 725 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gatgtacaagtggatgcatt 20 |||||||||||||||||||| Sbjct: 1151 gatgtacaagtggatgcatt 1132
>ref|XM_507367.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1162 Score = 268 bits (135), Expect = 1e-68 Identities = 164/173 (94%), Gaps = 3/173 (1%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 904 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 845 Query: 298 cggacccttgccggtggcggc---ctgcacggcgaagccgaggaaggcgaccatggcgag 354 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 844 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 785 Query: 355 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccg 407 |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 784 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccg 732 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gatgtacaagtggatgcatt 20 |||||||||||||||||||| Sbjct: 1158 gatgtacaagtggatgcatt 1139
>ref|XM_507366.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1183 Score = 268 bits (135), Expect = 1e-68 Identities = 164/173 (94%), Gaps = 3/173 (1%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 904 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 845 Query: 298 cggacccttgccggtggcggc---ctgcacggcgaagccgaggaaggcgaccatggcgag 354 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 844 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 785 Query: 355 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccg 407 |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 784 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccg 732 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gatgtacaagtggatgcatt 20 |||||||||||||||||||| Sbjct: 1158 gatgtacaagtggatgcatt 1139
>ref|XM_506405.2| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1221 Score = 268 bits (135), Expect = 1e-68 Identities = 164/173 (94%), Gaps = 3/173 (1%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 918 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 859 Query: 298 cggacccttgccggtggcggc---ctgcacggcgaagccgaggaaggcgaccatggcgag 354 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 858 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 799 Query: 355 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccg 407 |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 798 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccg 746 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gatgtacaagtggatgcatt 20 |||||||||||||||||||| Sbjct: 1172 gatgtacaagtggatgcatt 1153
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 268 bits (135), Expect = 1e-68 Identities = 164/173 (94%), Gaps = 3/173 (1%) Strand = Plus / Plus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 22263067 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 22263126 Query: 298 cggacccttgccggtggcggc---ctgcacggcgaagccgaggaaggcgaccatggcgag 354 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 22263127 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 22263186 Query: 355 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccg 407 |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 22263187 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccg 22263239 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gatgtacaagtggatgcatt 20 |||||||||||||||||||| Sbjct: 22262813 gatgtacaagtggatgcatt 22262832 Score = 40.1 bits (20), Expect = 5.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 157 ttcgttacacggacgcgcgttcgtccat 184 ||||||||||||||| |||||||||||| Sbjct: 7208546 ttcgttacacggacg-gcgttcgtccat 7208572
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 268 bits (135), Expect = 1e-68 Identities = 164/173 (94%), Gaps = 3/173 (1%) Strand = Plus / Plus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 68313 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 68372 Query: 298 cggacccttgccggtggcggc---ctgcacggcgaagccgaggaaggcgaccatggcgag 354 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 68373 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 68432 Query: 355 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccg 407 |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 68433 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccg 68485 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gatgtacaagtggatgcatt 20 |||||||||||||||||||| Sbjct: 68059 gatgtacaagtggatgcatt 68078
>dbj|AK119534.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B02, full insert sequence Length = 1234 Score = 268 bits (135), Expect = 1e-68 Identities = 164/173 (94%), Gaps = 3/173 (1%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 904 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 845 Query: 298 cggacccttgccggtggcggc---ctgcacggcgaagccgaggaaggcgaccatggcgag 354 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 844 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 785 Query: 355 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccg 407 |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 784 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccg 732 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gatgtacaagtggatgcatt 20 |||||||||||||||||||| Sbjct: 1158 gatgtacaagtggatgcatt 1139
>dbj|AK104619.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F11, full insert sequence Length = 1152 Score = 268 bits (135), Expect = 1e-68 Identities = 164/173 (94%), Gaps = 3/173 (1%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 897 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 838 Query: 298 cggacccttgccggtggcggc---ctgcacggcgaagccgaggaaggcgaccatggcgag 354 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 837 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 778 Query: 355 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccg 407 |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 777 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccg 725 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gatgtacaagtggatgcatt 20 |||||||||||||||||||| Sbjct: 1151 gatgtacaagtggatgcatt 1132
>dbj|AK104309.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D03, full insert sequence Length = 1169 Score = 268 bits (135), Expect = 1e-68 Identities = 164/173 (94%), Gaps = 3/173 (1%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 911 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 852 Query: 298 cggacccttgccggtggcggc---ctgcacggcgaagccgaggaaggcgaccatggcgag 354 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 851 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 792 Query: 355 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccg 407 |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 791 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccg 739 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gatgtacaagtggatgcatt 20 |||||||||||||||||||| Sbjct: 1165 gatgtacaagtggatgcatt 1146
>dbj|AK103924.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-C12, full insert sequence Length = 1183 Score = 268 bits (135), Expect = 1e-68 Identities = 164/173 (94%), Gaps = 3/173 (1%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 904 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 845 Query: 298 cggacccttgccggtggcggc---ctgcacggcgaagccgaggaaggcgaccatggcgag 354 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 844 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 785 Query: 355 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccg 407 |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 784 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccg 732 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gatgtacaagtggatgcatt 20 |||||||||||||||||||| Sbjct: 1158 gatgtacaagtggatgcatt 1139
>dbj|AK098992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098H13, full insert sequence Length = 1156 Score = 268 bits (135), Expect = 1e-68 Identities = 164/173 (94%), Gaps = 3/173 (1%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 902 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 843 Query: 298 cggacccttgccggtggcggc---ctgcacggcgaagccgaggaaggcgaccatggcgag 354 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 842 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 783 Query: 355 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccg 407 |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 782 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccg 730
>dbj|AK058293.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F01, full insert sequence Length = 1221 Score = 268 bits (135), Expect = 1e-68 Identities = 164/173 (94%), Gaps = 3/173 (1%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 918 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 859 Query: 298 cggacccttgccggtggcggc---ctgcacggcgaagccgaggaaggcgaccatggcgag 354 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 858 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 799 Query: 355 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccg 407 |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 798 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccg 746 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gatgtacaagtggatgcatt 20 |||||||||||||||||||| Sbjct: 1172 gatgtacaagtggatgcatt 1153
>gb|AF058796.1|AF058796 Oryza sativa chlorophyll a/b-binding protein (RCABP69) mRNA, complete cds Length = 1178 Score = 268 bits (135), Expect = 1e-68 Identities = 164/173 (94%), Gaps = 3/173 (1%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 902 gaaggtgtcgaagatggtggtgtggagcgggtcgctgaggtgggtggcccagttgttgag 843 Query: 298 cggacccttgccggtggcggc---ctgcacggcgaagccgaggaaggcgaccatggcgag 354 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 842 gggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcgag 783 Query: 355 gcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccg 407 |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 782 gcgggcgtgcttgatctccgccagctgcagccgctccttcttctccgggtccg 730 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gatgtacaagtggatgcatt 20 |||||||||||||||||||| Sbjct: 1156 gatgtacaagtggatgcatt 1137
>gb|AY103995.1| Zea mays PCO102677 mRNA sequence Length = 1225 Score = 248 bits (125), Expect = 1e-62 Identities = 166/179 (92%), Gaps = 3/179 (1%) Strand = Plus / Minus Query: 236 ccgaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttg 295 ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 918 ccgaacgtgtcgaagatggtggtgtggagcgggtcgctcaggtgggtggcccagttgttg 859 Query: 296 agcggacccttgccggtggcggc---ctgcacggcgaagccgaggaaggcgaccatggcg 352 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 858 agcggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcg 799 Query: 353 aggcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgc 411 ||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||| Sbjct: 798 aggcgcgcgtgcttgatctccgccagctgcagccgctccttcttctcagggtcggccgc 740 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 30 ttggttcatattttacaaatcaccaagtcccagc 63 |||| |||||| ||||||| |||||||||||||| Sbjct: 1153 ttggatcatatattacaaaccaccaagtcccagc 1120
>emb|Z50801.1|ZMCABCP29 Z.mays mRNA for chlorophyll a/b-binding protein CP29 Length = 1162 Score = 240 bits (121), Expect = 3e-60 Identities = 165/179 (92%), Gaps = 3/179 (1%) Strand = Plus / Minus Query: 236 ccgaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttg 295 ||||| |||||||||||||| ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 873 ccgaacgtgtcgaagatggtagtgtggagcgggtcgctcaggtgggtggcccagttgttg 814 Query: 296 agcggacccttgccggtggcggc---ctgcacggcgaagccgaggaaggcgaccatggcg 352 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 813 agcggccccttgccggtggcggcggcctgcacggcgaagccgaggaaggcgaccatggcg 754 Query: 353 aggcgggcgtgcttgatctccgccagctgcagagtctccttcttctccgggtccgccgc 411 ||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||| Sbjct: 753 aggcgcgcgtgcttgatctccgccagctgcagccgctccttcttctcagggtcggccgc 695 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 30 ttggttcatattttacaaatcaccaagtcccagc 63 |||| |||||| ||||||| |||||||||||||| Sbjct: 1104 ttggatcatatattacaaaccaccaagtcccagc 1071
>gb|AF139466.2|AF139466 Vigna radiata chlorophyll a/b binding protein CP29 (CipCp29) mRNA, complete cds; nuclear gene for chloroplast product Length = 1118 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 ||||||||| | |||||| ||||| || ||||| || | ||||||||||||||||||||| Sbjct: 918 gaaggtgtcaatgatggttgtgtgaagtgggtcactcaagtgggtggcccagttgttgag 859 Query: 298 cggacccttgccggtggc 315 || |||||||| ||||| Sbjct: 858 tgggcccttgccagtggc 841
>emb|BX822730.1|CNS0A5TB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZH12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 971 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| ||||||||||| || ||||| || ||||| ||||||||||||||||| Sbjct: 863 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtggcccagttgttgag 804 Query: 298 cgg 300 ||| Sbjct: 803 cgg 801
>ref|XM_472726.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 696 ggcgagcatggcgaggcgggcgtgcttgatctc 664
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 19722 ggcgagcatggcgaggcgggcgtgcttgatctc 19754
>gb|DQ427744.1| Sorghum propinquum locus HHU11 genomic sequence Length = 757 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 748 ggcgagcatggcgaggcgggcgtgcttgatctc 716
>gb|DQ427743.1| Sorghum bicolor voucher PI585454 locus HHU11 genomic sequence Length = 755 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 746 ggcgagcatggcgaggcgggcgtgcttgatctc 714
>gb|DQ427742.1| Sorghum bicolor voucher PI267539 locus HHU11 genomic sequence Length = 755 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 746 ggcgagcatggcgaggcgggcgtgcttgatctc 714
>gb|DQ427741.1| Sorghum bicolor voucher PI267408 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427740.1| Sorghum bicolor voucher PI221607 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427739.1| Sorghum bicolor voucher PI152702 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427738.1| Sorghum bicolor voucher NSL92371 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427737.1| Sorghum bicolor voucher NSL87902b locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427736.1| Sorghum bicolor voucher NSL87902a locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427735.1| Sorghum bicolor voucher NSL87666 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427734.1| Sorghum bicolor voucher NSL77217 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427733.1| Sorghum bicolor voucher NSL77034 locus HHU11 genomic sequence Length = 755 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 746 ggcgagcatggcgaggcgggcgtgcttgatctc 714
>gb|DQ427732.1| Sorghum bicolor voucher NSL56174 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427731.1| Sorghum bicolor voucher NSL55243 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427730.1| Sorghum bicolor voucher NSL51365 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427729.1| Sorghum bicolor voucher NSL51030 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>gb|DQ427728.1| Sorghum bicolor voucher NSL50875 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 752 ggcgagcatggcgaggcgggcgtgcttgatctc 720
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 22810947 ggcgagcatggcgaggcgggcgtgcttgatctc 22810979
>dbj|AK108672.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-H08, full insert sequence Length = 1377 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 102 ggcgagcatggcgaggcgggcgtgcttgatctc 134
>dbj|AK104811.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G02, full insert sequence Length = 1138 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 758 ggcgagcatggcgaggcgggcgtgcttgatctc 726
>dbj|AK066070.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055K10, full insert sequence Length = 1144 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 340 ggcgaccatggcgaggcgggcgtgcttgatctc 372 ||||| ||||||||||||||||||||||||||| Sbjct: 759 ggcgagcatggcgaggcgggcgtgcttgatctc 727
>gb|AY171230.1| Chlamydomonas reinhardtii CP29-like protein (Lhcb4) mRNA, complete cds; nuclear gene for chloroplast product Length = 1382 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgaggcgggcgtgcttgatctc 372 |||||||| || |||||| ||||| |||||| || |||||||||||||||||||| Sbjct: 782 gcctgcacaccgtagccgaagaaggagaccatcgccaggcgggcgtgcttgatctc 727
>dbj|AB051211.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein Lhcb4, complete cds Length = 1411 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgaggcgggcgtgcttgatctc 372 |||||||| || |||||| ||||| |||||| || |||||||||||||||||||| Sbjct: 820 gcctgcacaccgtagccgaagaaggagaccatcgccaggcgggcgtgcttgatctc 765
>dbj|AB051207.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein Lhcb4, complete cds Length = 1607 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgaggcgggcgtgcttgatctc 372 |||||||| || |||||| ||||| |||||| || |||||||||||||||||||| Sbjct: 1366 gcctgcacaccgtagccgaagaaggagaccatcgccaggcgggcgtgcttgatctc 1311
>ref|NM_111728.2| Arabidopsis thaliana LHCB4.2 AT3G08940 (LHCB4.2) transcript variant AT3G08940.2 mRNA, complete cds Length = 1109 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 893 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 834 Query: 298 cgg 300 ||| Sbjct: 833 cgg 831
>ref|NM_180214.1| Arabidopsis thaliana LHCB4.2; chlorophyll binding AT3G08940 (LHCB4.2) transcript variant AT3G08940.1 mRNA, complete cds Length = 1194 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 978 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 919 Query: 298 cgg 300 ||| Sbjct: 918 cgg 916
>gb|AC010871.7|ATAC010871 Arabidopsis thaliana chromosome III BAC T16O11 genomic sequence, complete sequence Length = 80381 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 37892 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 37951 Query: 298 cgg 300 ||| Sbjct: 37952 cgg 37954
>gb|AY081608.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein (At3g08940) mRNA, complete cds Length = 881 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 852 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 793 Query: 298 cgg 300 ||| Sbjct: 792 cgg 790
>gb|AY065140.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein (At3g08940; T16O11.12) mRNA, complete cds Length = 1023 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 893 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 834 Query: 298 cgg 300 ||| Sbjct: 833 cgg 831
>emb|BX822436.1|CNS0A619 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB38ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1004 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 874 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 815 Query: 298 cgg 300 ||| Sbjct: 814 cgg 812
>emb|BX823814.1|CNS0A5CT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZG07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 688 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 555 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 496 Query: 298 cgg 300 ||| Sbjct: 495 cgg 493
>emb|BX823751.1|CNS0A5AT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS72ZB02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 981 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 873 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 814 Query: 298 cgg 300 ||| Sbjct: 813 cgg 811
>emb|BX823498.1|CNS0A5AS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS44ZD12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 990 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 883 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 824 Query: 298 cgg 300 ||| Sbjct: 823 cgg 821
>emb|BX823817.1|CNS0A4NR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS7ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 691 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 558 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 499 Query: 298 cgg 300 ||| Sbjct: 498 cgg 496
>emb|BX823629.1|CNS0A4ND Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS5ZA12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 992 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 877 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 818 Query: 298 cgg 300 ||| Sbjct: 817 cgg 815
>gb|AF134127.1| Arabidopsis thaliana Lhcb4.2 protein (Lhcb4.2) mRNA, complete cds Length = 1040 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| ||||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 896 gaaggtatcgataatggtggtgtgaagtgggtcactaaggtgagtcgcccagttgttgag 837 Query: 298 cgg 300 ||| Sbjct: 836 cgg 834
>gb|AY103838.1| Zea mays PCO113775 mRNA sequence Length = 958 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctccgccagct 380 |||||||| |||||||||||||||||| ||||||| Sbjct: 744 catggcgatgcgggcgtgcttgatctcggccagct 710
>gb|U23190.1|ZMU23190 Zea mays chlorophyll a/b-binding apoprotein CP24 (Lhcb6-1) mRNA, complete cds Length = 1040 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctccgccagct 380 |||||||| |||||||||||||||||| ||||||| Sbjct: 707 catggcgatgcgggcgtgcttgatctcggccagct 673
>ref|NM_120231.3| Arabidopsis thaliana chlorophyll binding AT5G01530 mRNA, complete cds Length = 1222 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 1008 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 949 Query: 298 cggacc 303 ||||| Sbjct: 948 tggacc 943
>ref|XM_464479.1| Oryza sativa (japonica cultivar-group), mRNA Length = 675 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 636 gcctggacggagaagccgaggaaggcgagcatggcgag 599
>ref|XM_464478.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>ref|XM_507457.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1078 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>ref|XM_507456.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1121 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>ref|XM_507455.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1112 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 767 gcctggacggagaagccgaggaaggcgagcatggcgag 730
>ref|XM_507454.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1121 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 776 gcctggacggagaagccgaggaaggcgagcatggcgag 739
>ref|XM_507453.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1127 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 782 gcctggacggagaagccgaggaaggcgagcatggcgag 745
>ref|XM_507452.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1127 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 782 gcctggacggagaagccgaggaaggcgagcatggcgag 745
>ref|XM_507451.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>ref|XM_507450.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>ref|XM_507449.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>ref|XM_507448.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>ref|XM_464480.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 672 gcctggacggagaagccgaggaaggcgagcatggcgag 635
>ref|XM_507447.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1145 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 800 gcctggacggagaagccgaggaaggcgagcatggcgag 763
>ref|XM_507446.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1145 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 800 gcctggacggagaagccgaggaaggcgagcatggcgag 763
>ref|XM_507445.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1148 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 803 gcctggacggagaagccgaggaaggcgagcatggcgag 766
>ref|XM_507444.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1148 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 803 gcctggacggagaagccgaggaaggcgagcatggcgag 766
>ref|XM_507443.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1151 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 806 gcctggacggagaagccgaggaaggcgagcatggcgag 769
>ref|XM_507442.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1168 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 823 gcctggacggagaagccgaggaaggcgagcatggcgag 786
>ref|XM_507441.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1198 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 853 gcctggacggagaagccgaggaaggcgagcatggcgag 816
>ref|XM_506748.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 783 gcctggacggagaagccgaggaaggcgagcatggcgag 746
>gb|BT000363.1| Arabidopsis thaliana chlorophyll a/b-binding protein CP29 (At5g01530) mRNA, complete cds Length = 966 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 861 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 802 Query: 298 cggacc 303 ||||| Sbjct: 801 tggacc 796
>emb|AL161946.1|ATF7A7 Arabidopsis thaliana DNA chromosome 5, BAC clone F7A7 (ESSA project) Length = 86690 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 17890 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 17831 Query: 298 cggacc 303 ||||| Sbjct: 17830 tggacc 17825
>gb|AY133566.1| Arabidopsis thaliana At5g01530/F7A7_50 mRNA, complete cds Length = 873 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 861 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 802 Query: 298 cggacc 303 ||||| Sbjct: 801 tggacc 796
>gb|AY092980.1| Arabidopsis thaliana chlorophyll a/b-binding protein CP29 (At5g01530) mRNA, complete cds Length = 1094 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 896 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 837 Query: 298 cggacc 303 ||||| Sbjct: 836 tggacc 831
>gb|AY081680.1| Arabidopsis thaliana chlorophyll a/b-binding protein CP29 (At5g01530) mRNA, complete cds Length = 947 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 861 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 802 Query: 298 cggacc 303 ||||| Sbjct: 801 tggacc 796
>gb|AY059861.1| Arabidopsis thaliana chlorophyll a/b-binding protein CP29 (At5g01530; F7A7_50) mRNA, complete cds Length = 1023 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 897 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 838 Query: 298 cggacc 303 ||||| Sbjct: 837 tggacc 832
>gb|AY057641.1| Arabidopsis thaliana AT5g01530/F7A7_50 mRNA, complete cds Length = 1113 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 896 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 837 Query: 298 cggacc 303 ||||| Sbjct: 836 tggacc 831
>dbj|AK221043.1| Arabidopsis thaliana mRNA for Lhcb4- protein, partial cds, clone: RAFL22-74-I16 Length = 212 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 107 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 48 Query: 298 cggacc 303 ||||| Sbjct: 47 tggacc 42
>gb|AY048300.1| Arabidopsis thaliana AT5g01530/F7A7_50 mRNA, complete cds Length = 1074 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 898 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 839 Query: 298 cggacc 303 ||||| Sbjct: 838 tggacc 833
>gb|AF370474.1|AF370474 Arabidopsis thaliana chlorophyll a/b-binding protein CP29 (F7A7_50) mRNA, complete cds Length = 1064 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 921 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 862 Query: 298 cggacc 303 ||||| Sbjct: 861 tggacc 856
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 5468993 gcctggacggagaagccgaggaaggcgagcatggcgag 5469030
>emb|BX833597.1|CNS0A1R6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL65ZB03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 970 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 882 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 823 Query: 298 cggacc 303 ||||| Sbjct: 822 tggacc 817
>emb|BX831442.1|CNS0A1WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 954 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 866 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 807 Query: 298 cggacc 303 ||||| Sbjct: 806 tggacc 801
>emb|BX830127.1|CNS0A1XL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZD03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 963 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 859 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 800 Query: 298 cggacc 303 ||||| Sbjct: 799 tggacc 794
>emb|BX830573.1|CNS0A06T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB90ZH03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1043 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 985 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 926 Query: 298 cggacc 303 ||||| Sbjct: 925 tggacc 920
>emb|BX831299.1|CNS09ZIA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS77ZA02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 946 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 883 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 824 Query: 298 cggacc 303 ||||| Sbjct: 823 tggacc 818
>emb|BX831064.1|CNS09ZJ3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS54ZH08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1077 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 882 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 823 Query: 298 cggacc 303 ||||| Sbjct: 822 tggacc 817
>emb|BX830905.1|CNS09ZE8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS38ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 941 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 882 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 823 Query: 298 cggacc 303 ||||| Sbjct: 822 tggacc 817
>emb|BX830685.1|CNS09ZE5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS14ZD06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 940 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 882 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 823 Query: 298 cggacc 303 ||||| Sbjct: 822 tggacc 817
>gb|AF110787.1|AF110787 Volvox carteri f. nagariensis clone G12 light harvesting complex a protein (lhca) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1162 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Minus Query: 316 ggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgggcgtgcttgatctcc 373 |||||||||||||||||| | |||||| ||||| || |||||| ||| ||||| |||| Sbjct: 548 ggcctgcacggcgaagccaacgaaggcaaccatagcaaggcggccgttcttgacctcc 491
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 122574 gcctggacggagaagccgaggaaggcgagcatggcgag 122611
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 13728 gcctggacggagaagccgaggaaggcgagcatggcgag 13765
>dbj|AK109398.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A11, full insert sequence Length = 1128 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 783 gcctggacggagaagccgaggaaggcgagcatggcgag 746
>dbj|AK119554.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E06, full insert sequence Length = 1129 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>emb|X71878.1|ATLHCB4 A.thaliana Lhcb4 gene Length = 2100 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 1991 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgagtagcccaattgttgag 1932 Query: 298 cggacc 303 ||||| Sbjct: 1931 tggacc 1926
>dbj|AK106085.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B02, full insert sequence Length = 1198 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 853 gcctggacggagaagccgaggaaggcgagcatggcgag 816
>dbj|AK104557.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-G04, full insert sequence Length = 1112 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 767 gcctggacggagaagccgaggaaggcgagcatggcgag 730
>dbj|AK104535.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-E04, full insert sequence Length = 1148 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 803 gcctggacggagaagccgaggaaggcgagcatggcgag 766
>dbj|AK104522.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E10, full insert sequence Length = 1078 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>dbj|AK104734.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C11, full insert sequence Length = 1121 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 776 gcctggacggagaagccgaggaaggcgagcatggcgag 739
>dbj|AK104646.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H01, full insert sequence Length = 1127 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 782 gcctggacggagaagccgaggaaggcgagcatggcgag 745
>dbj|AK104636.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D09, full insert sequence Length = 1126 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 781 gcctggacggagaagccgaggaaggcgagcatggcgag 744
>dbj|AK104469.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D06, full insert sequence Length = 1145 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 800 gcctggacggagaagccgaggaaggcgagcatggcgag 763
>dbj|AK104458.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B05, full insert sequence Length = 1129 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>dbj|AK104446.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B11, full insert sequence Length = 1148 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 803 gcctggacggagaagccgaggaaggcgagcatggcgag 766
>dbj|AK104392.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-H10, full insert sequence Length = 1151 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 806 gcctggacggagaagccgaggaaggcgagcatggcgag 769
>dbj|AK104385.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-E04, full insert sequence Length = 1121 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>dbj|AK104348.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F11, full insert sequence Length = 1145 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 800 gcctggacggagaagccgaggaaggcgagcatggcgag 763
>dbj|AK104215.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H02, full insert sequence Length = 1129 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>dbj|AK104096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-B04, full insert sequence Length = 1129 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>dbj|AK068102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130I24, full insert sequence Length = 1017 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 672 gcctggacggagaagccgaggaaggcgagcatggcgag 635
>dbj|AK060970.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D07, full insert sequence Length = 1168 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 823 gcctggacggagaagccgaggaaggcgagcatggcgag 786
>dbj|AK060143.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A02, full insert sequence Length = 988 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgag 354 ||||| |||| ||||||||||||||||| ||||||||| Sbjct: 784 gcctggacggagaagccgaggaaggcgagcatggcgag 747
>gb|AY106149.1| Zea mays PCO102434 mRNA sequence Length = 1081 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 328 gaagccgaggaaggcgaccatggcgaggcgggcgtgcttgatctcc 373 |||||||| |||||| | ||||||||||||| ||| |||||||||| Sbjct: 682 gaagccgacgaaggccagcatggcgaggcggccgttcttgatctcc 637
>gb|AF104633.2| Chlamydomonas reinhardtii light harvesting complex I protein precursor (Lhca1) mRNA, complete cds Length = 1129 Score = 50.1 bits (25), Expect = 0.006 Identities = 63/75 (84%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 302 cccttgccggtggcggcctgcacgg---cgaagccgaggaaggcgaccatggcgaggcgg 358 ||||||||||||||||| ||| || ||||||| ||||| || |||||||| |||||| Sbjct: 648 cccttgccggtggcggcgtgctgggcaacgaagcccaggaaagcaaccatggccaggcgg 589 Query: 359 gcgtgcttgatctcc 373 ||| |||||||||| Sbjct: 588 ccgttcttgatctcc 574
>dbj|AB122119.1| Chlamydomonas reinhardtii LhcI-6 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1664 Score = 50.1 bits (25), Expect = 0.006 Identities = 63/75 (84%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 302 cccttgccggtggcggcctgcacgg---cgaagccgaggaaggcgaccatggcgaggcgg 358 ||||||||||||||||| ||| || ||||||| ||||| || |||||||| |||||| Sbjct: 1395 cccttgccggtggcggcgtgctgggcaacgaagcccaggaaagcaaccatggccaggcgg 1336 Query: 359 gcgtgcttgatctcc 373 ||| |||||||||| Sbjct: 1335 ccgttcttgatctcc 1321
>emb|X65119.1|CRCABI1MR C.reinhardtii cabI-1 mRNA for light harvesting complex protein I-20 (LHCPI-20) Length = 1073 Score = 50.1 bits (25), Expect = 0.006 Identities = 63/75 (84%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 302 cccttgccggtggcggcctgcacgg---cgaagccgaggaaggcgaccatggcgaggcgg 358 ||||||||||||||||| ||| || ||||||| ||||| || |||||||| |||||| Sbjct: 597 cccttgccggtggcggcgtgctgggcaacgaagcccaggaaagcaaccatggccaggcgg 538 Query: 359 gcgtgcttgatctcc 373 ||| |||||||||| Sbjct: 537 ccgttcttgatctcc 523
>gb|AF268324.1|AF268324 Guillardia theta light-harvesting complex protein LHCC13 mRNA, complete cds Length = 787 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Minus Query: 337 gaaggcgaccatggcgaggcgggcgtgcttgatctc 372 |||||||| ||||||||||||| ||| ||||||||| Sbjct: 548 gaaggcgatcatggcgaggcggccgttcttgatctc 513
>gb|AY826900.1| Heterocapsa triquetra clone HTLHC3261 chloroplast light harvesting complex protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1235 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 341 gcgaccatggcgaggcgggcgtgcttgatctc 372 |||||||||||||||||| |||||||||||| Sbjct: 884 gcgaccatggcgaggcggcagtgcttgatctc 853
>emb|AJ308530.2|RSP308530 Rhodomonas sp. CS24 lhcc1 gene (partial), lhcc2 gene, ORF1, lhcc3 gene and lhcc4 gene Length = 12446 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Minus Query: 337 gaaggcgaccatggcgaggcgggcgtgcttgatctc 372 |||||||| ||||||||||||| ||| ||||||||| Sbjct: 9125 gaaggcgatcatggcgaggcggccgttcttgatctc 9090
>ref|NM_129568.2| Arabidopsis thaliana LHCB4.3; chlorophyll binding AT2G40100 (LHCB4.3) mRNA, complete cds Length = 1122 Score = 46.1 bits (23), Expect = 0.091 Identities = 65/79 (82%) Strand = Plus / Minus Query: 341 gcgaccatggcgaggcgggcgtgcttgatctccgccagctgcagagtctccttcttctcc 400 |||||||| ||||| || | |||||| ||||| ||||||| || ||| ||| |||||| Sbjct: 836 gcgaccatagcgagacgagagtgctttatctcagccagcttcaaagtatccaacttctct 777 Query: 401 gggtccgccgcgagtccca 419 || || ||||||||||||| Sbjct: 776 ggatcagccgcgagtccca 758
>gb|AY096735.1| Arabidopsis thaliana putative chlorophyll a/b binding protein (At2g40100) mRNA, complete cds Length = 862 Score = 46.1 bits (23), Expect = 0.091 Identities = 65/79 (82%) Strand = Plus / Minus Query: 341 gcgaccatggcgaggcgggcgtgcttgatctccgccagctgcagagtctccttcttctcc 400 |||||||| ||||| || | |||||| ||||| ||||||| || ||| ||| |||||| Sbjct: 755 gcgaccatagcgagacgagagtgctttatctcagccagcttcaaagtatccaacttctct 696 Query: 401 gggtccgccgcgagtccca 419 || || ||||||||||||| Sbjct: 695 ggatcagccgcgagtccca 677
>gb|AY070392.1| Arabidopsis thaliana putative chlorophyll a/b binding protein (At2g40100) mRNA, complete cds Length = 1025 Score = 46.1 bits (23), Expect = 0.091 Identities = 65/79 (82%) Strand = Plus / Minus Query: 341 gcgaccatggcgaggcgggcgtgcttgatctccgccagctgcagagtctccttcttctcc 400 |||||||| ||||| || | |||||| ||||| ||||||| || ||| ||| |||||| Sbjct: 836 gcgaccatagcgagacgagagtgctttatctcagccagcttcaaagtatccaacttctct 777 Query: 401 gggtccgccgcgagtccca 419 || || ||||||||||||| Sbjct: 776 ggatcagccgcgagtccca 758
>emb|BX823387.1|CNS0A5AY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS31ZA02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 918 Score = 46.1 bits (23), Expect = 0.091 Identities = 53/63 (84%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 878 gaaggtatcgataatggtggtgttaagtgggtcactaaggtgagtcgcccagttgttgag 819 Query: 298 cgg 300 ||| Sbjct: 818 cgg 816
>emb|BX842453.1|CNS0A903 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 586 Score = 46.1 bits (23), Expect = 0.091 Identities = 65/79 (82%) Strand = Plus / Minus Query: 341 gcgaccatggcgaggcgggcgtgcttgatctccgccagctgcagagtctccttcttctcc 400 |||||||| ||||| || | |||||| ||||| ||||||| || ||| ||| |||||| Sbjct: 413 gcgaccatagcgagacgagagtgctttatctcagccagcttcaaagtatccaacttctct 354 Query: 401 gggtccgccgcgagtccca 419 || || ||||||||||||| Sbjct: 353 ggatcagccgcgagtccca 335
>gb|AY088398.1| Arabidopsis thaliana clone 6454 mRNA, complete sequence Length = 991 Score = 46.1 bits (23), Expect = 0.091 Identities = 65/79 (82%) Strand = Plus / Minus Query: 341 gcgaccatggcgaggcgggcgtgcttgatctccgccagctgcagagtctccttcttctcc 400 |||||||| ||||| || | |||||| ||||| ||||||| || ||| ||| |||||| Sbjct: 818 gcgaccatagcgagacgagagtgctttatctcagccagcttcaaagtatccaacttctct 759 Query: 401 gggtccgccgcgagtccca 419 || || ||||||||||||| Sbjct: 758 ggatcagccgcgagtccca 740
>gb|AF134128.1| Arabidopsis thaliana Lhcb4:3 protein (Lhcb4.3) mRNA, complete cds Length = 966 Score = 46.1 bits (23), Expect = 0.091 Identities = 65/79 (82%) Strand = Plus / Minus Query: 341 gcgaccatggcgaggcgggcgtgcttgatctccgccagctgcagagtctccttcttctcc 400 |||||||| ||||| || | |||||| ||||| ||||||| || ||| ||| |||||| Sbjct: 775 gcgaccatagcgagacgagagtgctttatctcagccagcttcaaagtatccaacttctct 716 Query: 401 gggtccgccgcgagtccca 419 || || ||||||||||||| Sbjct: 715 ggatcagccgcgagtccca 697
>gb|AC007658.2|AC007658 Arabidopsis thaliana chromosome II section 216 of 255 of the complete sequence. Sequence from clones F27I1 Length = 12237 Score = 46.1 bits (23), Expect = 0.091 Identities = 65/79 (82%) Strand = Plus / Minus Query: 341 gcgaccatggcgaggcgggcgtgcttgatctccgccagctgcagagtctccttcttctcc 400 |||||||| ||||| || | |||||| ||||| ||||||| || ||| ||| |||||| Sbjct: 6928 gcgaccatagcgagacgagagtgctttatctcagccagcttcaaagtatccaacttctct 6869 Query: 401 gggtccgccgcgagtccca 419 || || ||||||||||||| Sbjct: 6868 ggatcagccgcgagtccca 6850
>dbj|AB050007.2| Chlamydomonas reinhardtii lhcb5 mRNA for CP26, complete cds Length = 952 Score = 46.1 bits (23), Expect = 0.091 Identities = 44/51 (86%) Strand = Plus / Minus Query: 323 acggcgaagccgaggaaggcgaccatggcgaggcgggcgtgcttgatctcc 373 ||||||||||| || | || ||||||||| |||||| ||| |||||||||| Sbjct: 798 acggcgaagcccagcacggagaccatggccaggcggccgttcttgatctcc 748
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 44.1 bits (22), Expect = 0.36 Identities = 49/58 (84%) Strand = Plus / Minus Query: 316 ggcctgcacggcgaagccgaggaaggcgaccatggcgaggcgggcgtgcttgatctcc 373 |||||||||| |||||||| | || || ||||||||||||| ||| |||||||||| Sbjct: 759 ggcctgcacgaagaagccgaacatggagaacatggcgaggcggccgttcttgatctcc 702
>emb|BX841630.1|CNS09YKO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB55ZH10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1015 Score = 44.1 bits (22), Expect = 0.36 Identities = 55/66 (83%) Strand = Plus / Minus Query: 238 gaaggtgtcgaagatggtggtgtgcagcgggtcgctgaggtgggtggcccagttgttgag 297 |||||| |||| |||||||||||| || || || |||||||| | ||||| |||||||| Sbjct: 882 gaaggtatcgatgatggtggtgtggagtggatcactgaggtgaggagcccaattgttgag 823 Query: 298 cggacc 303 ||||| Sbjct: 822 tggacc 817
>gb|AF110786.1|AF110786 Volvox carteri f. nagariensis clone G18 light harvesting complex a protein (lhca) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1047 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Minus Query: 328 gaagccgaggaaggcgaccatggcgaggcgggcgtgcttgatctcc 373 |||||||||||| || |||||||| || ||| ||| |||||||||| Sbjct: 670 gaagccgaggaaagcaaccatggccagacggccgttcttgatctcc 625
>dbj|AP006620.1| Nocardia farcinica IFM 10152 plasmid pNF2 DNA, complete sequence Length = 87093 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 303 ccttgccggtggcggcctgcac 324 |||||||||||||||||||||| Sbjct: 37832 ccttgccggtggcggcctgcac 37811 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 303 ccttgccggtggcggcctgcac 324 |||||||||||||||||||||| Sbjct: 10664 ccttgccggtggcggcctgcac 10643
>gb|AY245372.1| Iris fulva clone LFR3-3 IRRE retrotransposon, partial sequence Length = 3850 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 ggtcgctgaggtgggtggccc 287 ||||||||||||||||||||| Sbjct: 2333 ggtcgctgaggtgggtggccc 2353
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 gcgaagccgaggaaggcgacc 346 ||||||||||||||||||||| Sbjct: 254108 gcgaagccgaggaaggcgacc 254088
>gb|DQ118587.1| Isochrysis galbana isolate 53 chloroplast light harvesting protein isoform 15 mRNA, complete cds; nuclear gene for chloroplast product Length = 697 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 333 cgaggaaggcgaccatggcgaggcgggcgtgct 365 |||||||||| | ||||||||||||| |||||| Sbjct: 517 cgaggaaggcaatcatggcgaggcggccgtgct 485
>gb|AC003680.3| Arabidopsis thaliana chromosome 2 BAC F17K2 genomic sequence, complete sequence Length = 91854 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 cattggttcatattttacaaa 48 ||||||||||||||||||||| Sbjct: 52509 cattggttcatattttacaaa 52489
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 gcgaagccgaggaaggcgacc 346 ||||||||||||||||||||| Sbjct: 4606821 gcgaagccgaggaaggcgacc 4606841
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 42.1 bits (21), Expect = 1.4 Identities = 48/57 (84%) Strand = Plus / Minus Query: 317 gcctgcacggcgaagccgaggaaggcgaccatggcgaggcgggcgtgcttgatctcc 373 ||||||||| |||||||| | || || ||||||||||||| ||| |||||||||| Sbjct: 2615 gcctgcacgaagaagccgaacatggagaacatggcgaggcggccgttcttgatctcc 2559
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 663 catggcgaggcggccgttcttgatctcc 636
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 651 catggcgaggcggccgttcttgatctcc 624
>ref|XM_477163.1| Oryza sativa (japonica cultivar-group), mRNA Length = 267 Score = 40.1 bits (20), Expect = 5.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 157 ttcgttacacggacgcgcgttcgtccat 184 ||||||||||||||| |||||||||||| Sbjct: 27 ttcgttacacggacg-gcgttcgtccat 1
>gb|AY954735.1| Ostreococcus tauri chloroplast light-harvesting complex I protein precursor Lhca3 gene, complete cds; nuclear gene for chloroplast product Length = 1113 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 972 catggcgaggcggccgttcttgatctcc 945
>gb|AC135596.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032D10 map E20933S, complete sequence Length = 146118 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 gcgaagccgaggaaggcgac 345 |||||||||||||||||||| Sbjct: 47913 gcgaagccgaggaaggcgac 47894
>gb|AC129553.10| Mus musculus chromosome 5, clone RP24-351J24, complete sequence Length = 152414 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 gctgaggtgggtggcccagttgtt 294 ||||||||||||||||||| |||| Sbjct: 23315 gctgaggtgggtggcccagatgtt 23292
>gb|AY313897.1| Danio rerio ion channel NompC (nompc) mRNA, complete cds Length = 5533 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 199 gacagaaactgctcgaccaccgac 222 ||||||||||||| |||||||||| Sbjct: 4952 gacagaaactgctggaccaccgac 4929
>ref|XM_765286.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_70_11537_9429) partial mRNA Length = 2109 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 ccagctgcagagtctccttc 394 |||||||||||||||||||| Sbjct: 1993 ccagctgcagagtctccttc 1974
>emb|BX842653.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 8/11 Length = 347636 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 aaaccaaagcacgttcgtta 163 |||||||||||||||||||| Sbjct: 227818 aaaccaaagcacgttcgtta 227837
>gb|AC026101.24| Homo sapiens 3 BAC RP11-441D23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164728 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ttcatattttacaaatcacc 53 |||||||||||||||||||| Sbjct: 147265 ttcatattttacaaatcacc 147246
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 gaggaaggcgaccatggcga 353 |||||||||||||||||||| Sbjct: 1512096 gaggaaggcgaccatggcga 1512115
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 14011 catggcgaggcggccgttcttgatctcc 14038
>gb|AE012276.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 184 of 460 of the complete genome Length = 11910 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 cttgccggtggcggcctgcacggc 327 ||||||||||||||||||| |||| Sbjct: 10642 cttgccggtggcggcctgcgcggc 10619
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 cgaccatggcgaggcgggcg 361 |||||||||||||||||||| Sbjct: 2838327 cgaccatggcgaggcgggcg 2838346
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 cttgccggtggcggcctgcacggc 327 ||||||||||||||||||| |||| Sbjct: 3006502 cttgccggtggcggcctgcgcggc 3006525
>gb|AF268322.1|AF268322 Guillardia theta light-harvesting complex protein LHCC4 mRNA, partial cds Length = 715 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 337 gaaggcgaccatggcgaggcgggcgtgcttgatctc 372 |||||||| |||||||| ||| ||||||||||||| Sbjct: 301 gaaggcgagcatggcgatacggccgtgcttgatctc 266
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 tggcgaggcgggcgtgcttg 367 |||||||||||||||||||| Sbjct: 23588915 tggcgaggcgggcgtgcttg 23588934
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 gcgaagccgaggaaggcgac 345 |||||||||||||||||||| Sbjct: 10424067 gcgaagccgaggaaggcgac 10424048
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 10793647 catggcgaggcggccgttcttgatctcc 10793620
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 30025000 catggcgaggcggccgttcttgatctcc 30024973 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 23604194 catggcgaggcggccgttcttgatctcc 23604167
>gb|AF195794.1|AF195794 Chlamydomonas reinhardtii chlorophyll A-B binding protein of LHCI (CAB6A) mRNA, complete cds Length = 1136 Score = 40.1 bits (20), Expect = 5.6 Identities = 61/74 (82%), Gaps = 3/74 (4%) Strand = Plus / Minus Query: 303 ccttgccggtggcggcctgcacgg---cgaagccgaggaaggcgaccatggcgaggcggg 359 |||||||||||||||| ||| || ||||||| ||||| || |||||||| ||||| Sbjct: 642 ccttgccggtggcggcgtgctgggcaacgaagcccaggaaagcaaccatggccaggcgcc 583 Query: 360 cgtgcttgatctcc 373 ||| |||||||||| Sbjct: 582 cgttcttgatctcc 569
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 20990 catggcgaggcggccgttcttgatctcc 20963
>ref|NM_204787.1| Gallus gallus proteoglycan (PG-M), mRNA Length = 12307 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 tgcagctgagctgacagaaactgc 210 |||||| ||||||||||||||||| Sbjct: 7500 tgcagcagagctgacagaaactgc 7523
>gb|AC016673.5| Homo sapiens BAC clone RP11-17N4 from 2, complete sequence Length = 185332 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gccggtggcggcctgcacgg 326 |||||||||||||||||||| Sbjct: 129281 gccggtggcggcctgcacgg 129300
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 17370 catggcgaggcggccgttcttgatctcc 17343
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 66893 catggcgaggcggccgttcttgatctcc 66866
>dbj|AB163432.1| Bifidobacterium animalis oxc gene for oxalyl-CoA decarboxylase, complete cds Length = 3060 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 gcacggcgaagccgaggaag 340 |||||||||||||||||||| Sbjct: 3046 gcacggcgaagccgaggaag 3027
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 130265 catggcgaggcggccgttcttgatctcc 130238
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 40.1 bits (20), Expect = 5.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 157 ttcgttacacggacgcgcgttcgtccat 184 ||||||||||||||| |||||||||||| Sbjct: 49030 ttcgttacacggacg-gcgttcgtccat 49056
>gb|AE005126.1| Halobacterium sp. NRC-1 section 157 of 170 of the complete genome Length = 10575 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 ccttgccggtggcggcctgc 322 |||||||||||||||||||| Sbjct: 6994 ccttgccggtggcggcctgc 7013
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 722 catggcgaggcggccgttcttgatctcc 695
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 721 catggcgaggcggccgttcttgatctcc 694
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 1151 catggcgaggcggccgttcttgatctcc 1124
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 715 catggcgaggcggccgttcttgatctcc 688
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 720 catggcgaggcggccgttcttgatctcc 693
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 722 catggcgaggcggccgttcttgatctcc 695
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 744 catggcgaggcggccgttcttgatctcc 717
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 744 catggcgaggcggccgttcttgatctcc 717
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 746 catggcgaggcggccgttcttgatctcc 719
>dbj|AK061619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E02, full insert sequence Length = 650 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 251 catggcgaggcggccgttcttgatctcc 224
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 720 catggcgaggcggccgttcttgatctcc 693
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 720 catggcgaggcggccgttcttgatctcc 693
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 746 catggcgaggcggccgttcttgatctcc 719
>dbj|AP000805.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-698L23, complete sequence Length = 180996 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 caccaagtcccagcagctct 69 |||||||||||||||||||| Sbjct: 38344 caccaagtcccagcagctct 38325
>ref|NM_183349.1| Danio rerio transient receptor potential cation channel, subfamily N, member 1 (trpn1), mRNA Length = 5533 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 199 gacagaaactgctcgaccaccgac 222 ||||||||||||| |||||||||| Sbjct: 4952 gacagaaactgctggaccaccgac 4929
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 gcgaagccgaggaaggcgac 345 |||||||||||||||||||| Sbjct: 10495611 gcgaagccgaggaaggcgac 10495592
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 tggcgaggcgggcgtgcttg 367 |||||||||||||||||||| Sbjct: 23517106 tggcgaggcgggcgtgcttg 23517125
>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157690 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 tggcgaggcgggcgtgcttg 367 |||||||||||||||||||| Sbjct: 117495 tggcgaggcgggcgtgcttg 117476
>gb|AC126939.5| Mus musculus BAC clone RP23-62M8 from 13, complete sequence Length = 236514 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tgcagagtctccttcttctc 399 |||||||||||||||||||| Sbjct: 154683 tgcagagtctccttcttctc 154702
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 catggcgaggcgggcgtgcttgatctcc 373 ||||||||||||| ||| |||||||||| Sbjct: 705 catggcgaggcggccgttcttgatctcc 678
>gb|L42623.1|HRSHMCI Equus caballus (clone pcDNACG2) MHC class I mRNA, complete cds Length = 1516 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 371 tccgccagctgcagagtctccttc 394 ||||| |||||||||||||||||| Sbjct: 624 tccgcgagctgcagagtctccttc 601
>gb|AC133110.2| Homo sapiens BAC clone RP11-761N10 from 4, complete sequence Length = 59902 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 tgaggtgggtggcccagttg 292 |||||||||||||||||||| Sbjct: 9918 tgaggtgggtggcccagttg 9899
>dbj|D13542.1|CHKPRGL Chicken mRNA for proteoglycan, complete cds Length = 12307 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 tgcagctgagctgacagaaactgc 210 |||||| ||||||||||||||||| Sbjct: 7500 tgcagcagagctgacagaaactgc 7523
>dbj|AB071600.1| Oryza sativa (japonica cultivar-group) gene for transcription factor OsRS2, complete cds, cultivar:Nipponbare Length = 6510 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 tggcgaggcgggcgtgcttg 367 |||||||||||||||||||| Sbjct: 5715 tggcgaggcgggcgtgcttg 5696
>dbj|AB064519.1| Oryza sativa (japonica cultivar-group) OsRS2 mRNA for transcription factor rough sheath 2 like protein, complete cds Length = 1512 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 tggcgaggcgggcgtgcttg 367 |||||||||||||||||||| Sbjct: 1195 tggcgaggcgggcgtgcttg 1176 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,648,942 Number of Sequences: 3902068 Number of extensions: 3648942 Number of successful extensions: 104049 Number of sequences better than 10.0: 205 Number of HSP's better than 10.0 without gapping: 200 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 103144 Number of HSP's gapped (non-prelim): 896 length of query: 420 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 398 effective length of database: 17,147,199,772 effective search space: 6824585509256 effective search space used: 6824585509256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
