| Clone Name | rbaet20c08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 ccgagcacgatcgacggccgc 126 ||||||||||||||||||||| Sbjct: 619783 ccgagcacgatcgacggccgc 619763
>emb|AL160273.9| Human DNA sequence from clone RP11-366I5 on chromosome 9, complete sequence Length = 159934 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 taattaataatcacacaaaaa 38 ||||||||||||||||||||| Sbjct: 119166 taattaataatcacacaaaaa 119146
>gb|AY573073.1| Cyrtodiopsis dalmanni 12S ribosomal RNA gene, partial sequence; mitochondrial Length = 717 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 17 ttaattaataatcacacaaaaat 39 ||||||||||| ||||||||||| Sbjct: 29 ttaattaataaccacacaaaaat 7
>gb|AY532606.1| Rock bream iridovirus strain RBIV-KOR-TY1 from South Korea, complete genome Length = 112080 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 67 gtgcgacgttccaccgaca 85 ||||||||||||||||||| Sbjct: 77335 gtgcgacgttccaccgaca 77353
>emb|CR376860.38| Zebrafish DNA sequence from clone DKEY-111H22 in linkage group 8, complete sequence Length = 195545 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 attaataatcacacaaaaa 38 ||||||||||||||||||| Sbjct: 55266 attaataatcacacaaaaa 55284
>gb|AC005084.2| Homo sapiens BAC clone CTA-298G8 from 7, complete sequence Length = 177901 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 tcttaattaataatcacacaaaa 37 |||||||||||||||| |||||| Sbjct: 14043 tcttaattaataatcaaacaaaa 14065
>emb|AL121939.12|HSDJ223E3 Human DNA sequence from clone RP1-223E3 on chromosome 6q13-15 Contains the gene for a novel protein similar to serine protease 23 (PRSS23, ZSIG13), complete sequence Length = 59621 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 ttcttaattaataatcaca 32 ||||||||||||||||||| Sbjct: 45486 ttcttaattaataatcaca 45468
>emb|AL078584.17|HSJ245M18 Human DNA sequence from clone RP1-245M18 on chromosome 6p21.32-22.3 Contains the 5' end of the gene for chromosome 6 open reading frame 32 (PL48, DIFF40, DIFF48, KIAA0386), a cytochrome c oxidase polypeptide II pseudogene and a CpG island, complete sequence Length = 104770 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 24 ataatcacacaaaaatctc 42 ||||||||||||||||||| Sbjct: 42168 ataatcacacaaaaatctc 42150
>gb|AY894343.1| Orange-spotted grouper iridovirus, complete genome Length = 112636 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 67 gtgcgacgttccaccgaca 85 ||||||||||||||||||| Sbjct: 77710 gtgcgacgttccaccgaca 77728
>emb|AL662792.21| Mouse DNA sequence from clone RP23-52L14 on chromosome 11, complete sequence Length = 164120 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 21 ttaataatcacacaaaaatctct 43 |||||||||||| |||||||||| Sbjct: 72175 ttaataatcacaaaaaaatctct 72153
>emb|BX470231.8| Zebrafish DNA sequence from clone CH211-63H10 in linkage group 3, complete sequence Length = 180778 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 attaataatcacacaaaaa 38 ||||||||||||||||||| Sbjct: 98682 attaataatcacacaaaaa 98700
>emb|BX571833.6| Zebrafish DNA sequence from clone DKEY-287J13, complete sequence Length = 198050 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 attaataatcacacaaaaa 38 ||||||||||||||||||| Sbjct: 177479 attaataatcacacaaaaa 177497
>gb|AC012563.7|AC012563 Arabidopsis thaliana chromosome 1 BAC T23K23 genomic sequence, complete sequence Length = 101966 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 taattaataatcacacaaa 36 ||||||||||||||||||| Sbjct: 39023 taattaataatcacacaaa 39041
>emb|BX005050.6| Zebrafish DNA sequence from clone CH211-11A11, complete sequence Length = 166695 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gaacgtttcttaattaata 26 ||||||||||||||||||| Sbjct: 124123 gaacgtttcttaattaata 124141
>emb|AL837506.3| Mouse DNA sequence from clone RP23-353G2 on chromosome 2, complete sequence Length = 112171 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 aataatcacacaaaaatct 41 ||||||||||||||||||| Sbjct: 84792 aataatcacacaaaaatct 84810 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 954,778 Number of Sequences: 3902068 Number of extensions: 954778 Number of successful extensions: 63214 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63159 Number of HSP's gapped (non-prelim): 55 length of query: 133 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 112 effective length of database: 17,151,101,840 effective search space: 1920923406080 effective search space used: 1920923406080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)