| Clone Name | rbaet20c03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | GL33_ARATH (P94072) Germin-like protein subfamily 3 member 3 pre... | 32 | 0.41 | 2 | GLP1_SINAL (P45854) Germin-like protein 1 precursor | 30 | 1.6 | 3 | ABP20_PRUPE (O04011) Auxin-binding protein ABP20 precursor | 28 | 4.5 |
|---|
>GL33_ARATH (P94072) Germin-like protein subfamily 3 member 3 precursor| (AtGER3) (AtGLP2) Length = 211 Score = 32.0 bits (71), Expect = 0.41 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -2 Query: 301 LFANNLPSAVVEKVTFLDDAQ 239 LFAN+LPS +VE TFL DA+ Sbjct: 179 LFANDLPSELVEATTFLSDAE 199
>GLP1_SINAL (P45854) Germin-like protein 1 precursor| Length = 211 Score = 30.0 bits (66), Expect = 1.6 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -2 Query: 301 LFANNLPSAVVEKVTFLDDAQ 239 LFAN+LPS +VE TFL D + Sbjct: 179 LFANDLPSELVEATTFLSDEE 199
>ABP20_PRUPE (O04011) Auxin-binding protein ABP20 precursor| Length = 214 Score = 28.5 bits (62), Expect = 4.5 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -2 Query: 301 LFANNLPSAVVEKVTFLDDAQ 239 LF N+LP+ V+ + TFLD AQ Sbjct: 182 LFKNDLPTEVIAQTTFLDAAQ 202 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,310,838 Number of Sequences: 219361 Number of extensions: 407914 Number of successful extensions: 676 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 670 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 676 length of database: 80,573,946 effective HSP length: 76 effective length of database: 63,902,510 effective search space used: 1533660240 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)