ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet20c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY857762.1| Triticum monococcum peroxidase 8 (POX8) mRNA, com... 218 6e-54
2ref|NM_183816.1| Oryza sativa (japonica cultivar-group), predic... 50 0.003
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.003
4dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.003
5dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic D... 50 0.003
6dbj|AK099187.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.003
7dbj|AK070715.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.003
8dbj|AK059977.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.003
9tpe|BN000544.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 50 0.003
10gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.19
11gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.19
12dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.19
13dbj|AK102154.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.19
14dbj|AK067416.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.19
15tpe|BN000601.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 44 0.19
16gb|AC111122.13| Mus musculus chromosome 7, clone RP23-230L8, com... 42 0.77
17gb|AC129908.4| Homo sapiens chromosome 18, clone RP11-1147P1, co... 42 0.77
18gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 0.77
19gb|AC117715.10| Mus musculus chromosome 7, clone RP23-62M19, com... 42 0.77
20ref|XM_476366.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.0
21gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.0
22gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 3.0
23gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 3.0
24dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
25dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
26gb|AC016894.11| Homo sapiens BAC clone RP11-17D23 from 2, comple... 40 3.0
27dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
28dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
29dbj|AK106109.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.0
30dbj|AK104573.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.0
31dbj|AK104508.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.0
32dbj|AK104644.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.0
33dbj|AK104494.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.0
34dbj|AK104487.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.0
35dbj|AK104470.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.0
36dbj|AK104395.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.0
37dbj|AK104156.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.0
38dbj|AK067107.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.0
39dbj|AK061545.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.0
40tpe|BN000623.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 3.0
41tpe|BN000570.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 3.0 
>gb|AY857762.1| Triticum monococcum peroxidase 8 (POX8) mRNA, complete cds
          Length = 1282

 Score =  218 bits (110), Expect = 6e-54
 Identities = 178/200 (89%), Gaps = 3/200 (1%)
 Strand = Plus / Minus

                                                                        
Query: 38   agtataggcgcgaacggacaccgactagccagcacgcccgtgcattggcattcaagcacg 97
            |||||| | |||||||||||||||| |||||||||||||||||||| ||||||||| |||
Sbjct: 1201 agtatacgtgcgaacggacaccgaccagccagcacgcccgtgcattcgcattcaaggacg 1142

                                                                        
Query: 98   cacacatcaggccatggcgaccttgtcgtgcgagcccgggcggcggagcatctcgatcgc 157
            || ||||||| || |||||||||| ||||  |||||||| |||||||||||||||||| |
Sbjct: 1141 catacatcagcccttggcgaccttatcgtcggagcccggtcggcggagcatctcgatcac 1082

                                                                        
Query: 158  cccagcgtaagaagcggacaaagaggaggaggacgggttgacgaggctgcagttgaggcg 217
            ||||||||   | |||||| |||| ||||||| |||||||||||||||||||||||||||
Sbjct: 1081 cccagcgt---aggcggacgaagaagaggaggccgggttgacgaggctgcagttgaggcg 1025

                                
Query: 218  gatctggccctgcgtgccgg 237
            |||||  |||||||||||||
Sbjct: 1024 gatctccccctgcgtgccgg 1005
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>ref|NM_183816.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1062

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 186 gaggacgggttgacgaggctgcagttgaggcggatct 222
           |||||||||||||||  |||||||||||| |||||||
Sbjct: 983 gaggacgggttgacggcgctgcagttgagccggatct 947
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 186      gaggacgggttgacgaggctgcagttgaggcggatct 222
                |||||||||||||||  |||||||||||| |||||||
Sbjct: 12552477 gaggacgggttgacggcgctgcagttgagccggatct 12552441
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>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0537A05
          Length = 152396

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 186   gaggacgggttgacgaggctgcagttgaggcggatct 222
             |||||||||||||||  |||||||||||| |||||||
Sbjct: 64087 gaggacgggttgacggcgctgcagttgagccggatct 64051
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>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1135C02
          Length = 152306

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 186    gaggacgggttgacgaggctgcagttgaggcggatct 222
              |||||||||||||||  |||||||||||| |||||||
Sbjct: 138092 gaggacgggttgacggcgctgcagttgagccggatct 138056
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>dbj|AK099187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107P11, full
            insert sequence
          Length = 1271

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 186  gaggacgggttgacgaggctgcagttgaggcggatct 222
            |||||||||||||||  |||||||||||| |||||||
Sbjct: 1053 gaggacgggttgacggcgctgcagttgagccggatct 1017
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>dbj|AK070715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058L02, full
            insert sequence
          Length = 1492

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 186  gaggacgggttgacgaggctgcagttgaggcggatct 222
            |||||||||||||||  |||||||||||| |||||||
Sbjct: 1058 gaggacgggttgacggcgctgcagttgagccggatct 1022
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>dbj|AK059977.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B01, full
           insert sequence
          Length = 1015

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 186 gaggacgggttgacgaggctgcagttgaggcggatct 222
           |||||||||||||||  |||||||||||| |||||||
Sbjct: 747 gaggacgggttgacggcgctgcagttgagccggatct 711
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>tpe|BN000544.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx15 gene for
            class III peroxidase 15 precursor, exons 1-3
          Length = 5322

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 186  gaggacgggttgacgaggctgcagttgaggcggatct 222
            |||||||||||||||  |||||||||||| |||||||
Sbjct: 5243 gaggacgggttgacggcgctgcagttgagccggatct 5207
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>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12,
              complete sequence
          Length = 156263

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                            
Query: 192    gggttgacgaggctgcagttgaggcggatctggccctgcgtgccgg 237
              ||||||||||  ||||||||||| | ||||| ||||||||| ||||
Sbjct: 151518 gggttgacgaccctgcagttgagcctgatctcgccctgcgtcccgg 151563
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>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBb0099P06, complete sequence
          Length = 135117

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                          
Query: 192  gggttgacgaggctgcagttgaggcggatctggccctgcgtgccgg 237
            ||||||||||  ||||||||||| | ||||| ||||||||| ||||
Sbjct: 8234 gggttgacgaccctgcagttgagcctgatctcgccctgcgtcccgg 8279
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                             
Query: 192     gggttgacgaggctgcagttgaggcggatctggccctgcgtgccgg 237
               ||||||||||  ||||||||||| | ||||| ||||||||| ||||
Sbjct: 3585887 gggttgacgaccctgcagttgagcctgatctcgccctgcgtcccgg 3585932



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 173     ggacaaagaggaggaggacg 192
               ||||||||||||||||||||
Sbjct: 4203545 ggacaaagaggaggaggacg 4203526
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>dbj|AK102154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086E17, full
            insert sequence
          Length = 1344

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 192  gggttgacgaggctgcagttgaggcggatctggccctgcgtgccgg 237
            ||||||||||  ||||||||||| | ||||| ||||||||| ||||
Sbjct: 1037 gggttgacgaccctgcagttgagcctgatctcgccctgcgtcccgg 992
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>dbj|AK067416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102I07, full
            insert sequence
          Length = 1358

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 192  gggttgacgaggctgcagttgaggcggatctggccctgcgtgccgg 237
            ||||||||||  ||||||||||| | ||||| ||||||||| ||||
Sbjct: 1036 gggttgacgaccctgcagttgagcctgatctcgccctgcgtcccgg 991
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>tpe|BN000601.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx72 gene for
            class III peroxidase 72 precursor, exons 1-3
          Length = 1816

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 192  gggttgacgaggctgcagttgaggcggatctggccctgcgtgccgg 237
            ||||||||||  ||||||||||| | ||||| ||||||||| ||||
Sbjct: 1731 gggttgacgaccctgcagttgagcctgatctcgccctgcgtcccgg 1686
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>gb|AC111122.13| Mus musculus chromosome 7, clone RP23-230L8, complete sequence
          Length = 175772

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 168    gaagcggacaaagaggaggaggacg 192
              |||| ||||||||||||||||||||
Sbjct: 163887 gaagaggacaaagaggaggaggacg 163863
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>gb|AC129908.4| Homo sapiens chromosome 18, clone RP11-1147P1, complete sequence
          Length = 190809

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 166   aagaagcggacaaagaggaggagga 190
             |||||| ||||||||||||||||||
Sbjct: 69828 aagaagaggacaaagaggaggagga 69804
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 91      aagcacgcacacatcaggcca 111
               |||||||||||||||||||||
Sbjct: 3726479 aagcacgcacacatcaggcca 3726459
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>gb|AC117715.10| Mus musculus chromosome 7, clone RP23-62M19, complete sequence
          Length = 234594

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 168    gaagcggacaaagaggaggaggacg 192
              |||| ||||||||||||||||||||
Sbjct: 166151 gaagaggacaaagaggaggaggacg 166175
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>ref|XM_476366.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1050

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 194  gttgacgaggctgcagttgaggcggatctggccctg 229
            |||||||| | |||| ||||||||||||| ||||||
Sbjct: 1041 gttgacgacgttgcacttgaggcggatctcgccctg 1006
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>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10,
             complete sequence
          Length = 156772

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   ggacaaagaggaggaggacg 192
             ||||||||||||||||||||
Sbjct: 90024 ggacaaagaggaggaggacg 90005
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 206      gcagttgaggcggatctggccctgcgtgccgg 237
                ||||||||| | ||||| ||||||||||||||
Sbjct: 12591370 gcagttgagcctgatctcgccctgcgtgccgg 12591339
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>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0030D15, from chromosome 3, complete sequence
          Length = 151972

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 206   gcagttgaggcggatctggccctgcgtgccgg 237
             ||||||||| | ||||| ||||||||||||||
Sbjct: 85619 gcagttgagcctgatctcgccctgcgtgccgg 85650
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 194    gttgacgaggctgcagttgaggcggatctggccctg 229
              |||||||| | |||| ||||||||||||| ||||||
Sbjct: 252858 gttgacgacgttgcacttgaggcggatctcgccctg 252823
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 206      gcagttgaggcggatctggccctgcgtgccgg 237
                ||||||||| | ||||| ||||||||||||||
Sbjct: 12588133 gcagttgagcctgatctcgccctgcgtgccgg 12588102
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>gb|AC016894.11| Homo sapiens BAC clone RP11-17D23 from 2, complete sequence
          Length = 135160

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 168   gaagcggacaaagaggaggaggac 191
             |||| |||||||||||||||||||
Sbjct: 54758 gaagaggacaaagaggaggaggac 54781
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>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0446F04
          Length = 175390

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 194   gttgacgaggctgcagttgaggcggatctggccctg 229
             |||||||| | |||| ||||||||||||| ||||||
Sbjct: 87722 gttgacgacgttgcacttgaggcggatctcgccctg 87687
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>dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0617C02
          Length = 135605

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 194  gttgacgaggctgcagttgaggcggatctggccctg 229
            |||||||| | |||| ||||||||||||| ||||||
Sbjct: 4857 gttgacgacgttgcacttgaggcggatctcgccctg 4822
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>dbj|AK106109.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D07, full
            insert sequence
          Length = 1270

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 206  gcagttgaggcggatctggccctgcgtgccgg 237
            ||||||||| | ||||| ||||||||||||||
Sbjct: 1039 gcagttgagcctgatctcgccctgcgtgccgg 1008
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>dbj|AK104573.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H05, full
            insert sequence
          Length = 1265

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 206  gcagttgaggcggatctggccctgcgtgccgg 237
            ||||||||| | ||||| ||||||||||||||
Sbjct: 1039 gcagttgagcctgatctcgccctgcgtgccgg 1008
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>dbj|AK104508.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G09, full
            insert sequence
          Length = 1270

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 206  gcagttgaggcggatctggccctgcgtgccgg 237
            ||||||||| | ||||| ||||||||||||||
Sbjct: 1039 gcagttgagcctgatctcgccctgcgtgccgg 1008
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>dbj|AK104644.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G05, full
            insert sequence
          Length = 1270

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 206  gcagttgaggcggatctggccctgcgtgccgg 237
            ||||||||| | ||||| ||||||||||||||
Sbjct: 1039 gcagttgagcctgatctcgccctgcgtgccgg 1008
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>dbj|AK104494.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C02, full
            insert sequence
          Length = 1252

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 206  gcagttgaggcggatctggccctgcgtgccgg 237
            ||||||||| | ||||| ||||||||||||||
Sbjct: 1039 gcagttgagcctgatctcgccctgcgtgccgg 1008
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>dbj|AK104487.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B03, full
            insert sequence
          Length = 1215

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 206  gcagttgaggcggatctggccctgcgtgccgg 237
            ||||||||| | ||||| ||||||||||||||
Sbjct: 1039 gcagttgagcctgatctcgccctgcgtgccgg 1008
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>dbj|AK104470.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D07, full
            insert sequence
          Length = 1270

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 206  gcagttgaggcggatctggccctgcgtgccgg 237
            ||||||||| | ||||| ||||||||||||||
Sbjct: 1039 gcagttgagcctgatctcgccctgcgtgccgg 1008
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>dbj|AK104395.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C06, full
            insert sequence
          Length = 1270

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 206  gcagttgaggcggatctggccctgcgtgccgg 237
            ||||||||| | ||||| ||||||||||||||
Sbjct: 1039 gcagttgagcctgatctcgccctgcgtgccgg 1008
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>dbj|AK104156.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-C01, full
            insert sequence
          Length = 1264

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 206  gcagttgaggcggatctggccctgcgtgccgg 237
            ||||||||| | ||||| ||||||||||||||
Sbjct: 1036 gcagttgagcctgatctcgccctgcgtgccgg 1005
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>dbj|AK067107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094O18, full
            insert sequence
          Length = 1263

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 206  gcagttgaggcggatctggccctgcgtgccgg 237
            ||||||||| | ||||| ||||||||||||||
Sbjct: 1035 gcagttgagcctgatctcgccctgcgtgccgg 1004
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>dbj|AK061545.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-A04, full
           insert sequence
          Length = 1031

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 206 gcagttgaggcggatctggccctgcgtgccgg 237
           ||||||||| | ||||| ||||||||||||||
Sbjct: 803 gcagttgagcctgatctcgccctgcgtgccgg 772
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>tpe|BN000623.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx94 gene for
            class III peroxidase 94 precursor, exon 1
          Length = 1050

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 194  gttgacgaggctgcagttgaggcggatctggccctg 229
            |||||||| | |||| ||||||||||||| ||||||
Sbjct: 1041 gttgacgacgttgcacttgaggcggatctcgccctg 1006
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>tpe|BN000570.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx41 gene for
            class III peroxidase 41 precursor, exons 1-4
          Length = 5018

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 206  gcagttgaggcggatctggccctgcgtgccgg 237
            ||||||||| | ||||| ||||||||||||||
Sbjct: 5003 gcagttgagcctgatctcgccctgcgtgccgg 4972


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,145,513
Number of Sequences: 3902068
Number of extensions: 2145513
Number of successful extensions: 38652
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38466
Number of HSP's gapped (non-prelim): 185
length of query: 237
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 215
effective length of database: 17,147,199,772
effective search space: 3686647950980
effective search space used: 3686647950980
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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