>TCB1_RABIT (P06333) T-cell receptor beta chain ANA 11|
          Length = 319

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
 Frame = +2

Query: 71  TRDHARSLQV*CHV-PHIHTYWRSRASAGPKRL*ERVTFTALIILLSITSEEKLHCGSTA 247
           T  H+  L    HV  H HT   +   A         TFT L I  ++T    L C  T 
Sbjct: 50  THRHSYLLHPHTHVCTHTHTCTHTHIHASTHVCIHTHTFTHLCIH-TLTHALTLTCAPTR 108

Query: 248 AWATSRKGQLNYPHRPGP 301
            +A +R     +PH+P P
Sbjct: 109 TYAHTRAPTHVHPHKPRP 126

>LRP_CAEEL (Q04833) Low-density lipoprotein receptor-related protein precursor|
            (LRP)
          Length = 4753

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 15/49 (30%), Positives = 20/49 (40%)
 Frame = +1

Query: 118  HPHVLEESCKCRAKKVVGKSHIHSSNYSPFHYFRRKTSLRQYCSVGHQQ 264
            HP+ LE  C CR   ++ K + HS    P         + Q CS    Q
Sbjct: 1018 HPNELEAKCACRQGFMINKENNHSCQKDP------AEKIEQLCSSNSTQ 1060

>ARGC1_DEIRA (Q9RVQ9) N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-|
           aminoadipyl-phosphate reductase (EC 1.2.1.38) (EC
           1.2.1.-) (AGPR) (N-acetyl-glutamate
           semialdehyde/N-acetyl-aminoadipate semialdehyde
           dehydrogenase) (NAGSA dehydrogenase)
          Length = 348

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +1

Query: 154 AKKVVGKSHIHSSNYSPFHYFRRKTSLRQYCSVGHQQKGAAQLPTP 291
           A  +VG S   +S     H+  R  SLR Y  VGH+    AQ   P
Sbjct: 176 ATGLVGSSAAGASASESSHHPERAGSLRVYKPVGHRHTAEAQQELP 221

>HNRPL_MOUSE (Q8R081) Heterogeneous nuclear ribonucleoprotein L (hnRNP L)|
          Length = 555

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +2

Query: 287 HRPGPTRQGT*RFFYCYYGKNPPRPPP 367
           HR GP+R G        YG  PP PPP
Sbjct: 318 HRRGPSRYGP------QYGHPPPPPPP 338

>CCD39_HUMAN (Q9UFE4) Coiled-coil domain-containing protein 39|
          Length = 755

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 228 FTAAVLQRGPPAERGSSTTHT 290
           FT++ L RGPPA  G  + HT
Sbjct: 27  FTSSQLPRGPPASSGGHSFHT 47

>ATG2_MAGGR (Q51ZN8) Autophagy-related protein 2|
          Length = 2077

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -2

Query: 184 ECDSFLQPFWPCTCTTPPVRVDVGNM 107
           E  SFLQ F P T  TP + +D   M
Sbjct: 383 ESSSFLQGFTPYTAATPGIHLDADQM 408

>GGLO_MOUSE (P58710) L-gulonolactone oxidase (EC 1.1.3.8) (LGO)|
           (L-gulono-gamma-lactone oxidase) (GLO)
          Length = 439

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +1

Query: 88  LFTSLMSCSPHPHVLEESCKCRAKKVVGK--SHIHSSNYSPFHYF 216
           + T  + C P  H+LE S     K+V+    SH+  S Y  F +F
Sbjct: 176 ILTVTLQCVPQFHLLETSFPSTLKEVLDNLDSHLKKSEYFRFLWF 220

>C13B1_CAEEL (O17624) Putative cytochrome P450 cyp-13B1 (EC 1.14.-.-)|
          Length = 527

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 119 IHTYWRSRASAGPKRL 166
           IHTYWR R  +GP+ L
Sbjct: 21  IHTYWRRRGISGPEGL 36

>PVG4_SCHPO (Q9HGP0) MADS-box transcription factor pvg4 (Pyruvylated|
           Gal-beta-1,3-epitope synthesis protein 4) (PvGal
           synthesis protein 4) (MADS-box transcription factor 2)
          Length = 372

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = +1

Query: 70  YTRPRTLFTS-LMSCSPHPHVLEESCKCRAKKVVGKSHIHSSNYSPFHYFRRKTS 231
           Y RP  L ++ + SC P P         R        H H++NY P + F+   S
Sbjct: 146 YCRPEPLSSNHVRSCPPFPPTQHHHPHTRPPHHPPHPHFHNNNYPPPYCFQSPVS 200

>HNRPL_HUMAN (P14866) Heterogeneous nuclear ribonucleoprotein L (hnRNP L)|
          Length = 558

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +2

Query: 287 HRPGPTRQGT*RFFYCYYGKNPPRPPP 367
           HR GP+R G        YG  PP PPP
Sbjct: 321 HRRGPSRYGP------QYGHPPPPPPP 341


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,937,642
Number of Sequences: 219361
Number of extensions: 1090454
Number of successful extensions: 2951
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2951
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)