>ref|XM_468939.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 981

 Score =  103 bits (52), Expect = 4e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                       
Query: 225 atttccataactcctccatcggaagcccacgctctgcagccacatctgagaactgtctca 284
           ||||||||| || |||||| |||||||| ||||||||||| |||||   |||||| ||||
Sbjct: 979 atttccatagctgctccattggaagcccgcgctctgcagcaacatccttgaactgcctca 920

                                                               
Query: 285 tcatctgcgtcgccttgacggtagcccttgcattgttgagaggattcttgct 336
           |||| || |||||||||| |||||| |||||||||||||| || ||||||||
Sbjct: 919 tcatttgggtcgccttgatggtagctcttgcattgttgagggggttcttgct 868

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  103 bits (52), Expect = 4e-19
 Identities = 97/112 (86%)
 Strand = Plus / Plus

                                                                            
Query: 225      atttccataactcctccatcggaagcccacgctctgcagccacatctgagaactgtctca 284
                ||||||||| || |||||| |||||||| ||||||||||| |||||   |||||| ||||
Sbjct: 19225001 atttccatagctgctccattggaagcccgcgctctgcagcaacatccttgaactgcctca 19225060

                                                                    
Query: 285      tcatctgcgtcgccttgacggtagcccttgcattgttgagaggattcttgct 336
                |||| || |||||||||| |||||| |||||||||||||| || ||||||||
Sbjct: 19225061 tcatttgggtcgccttgatggtagctcttgcattgttgagggggttcttgct 19225112

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  103 bits (52), Expect = 4e-19
 Identities = 97/112 (86%)
 Strand = Plus / Plus

                                                                            
Query: 225      atttccataactcctccatcggaagcccacgctctgcagccacatctgagaactgtctca 284
                ||||||||| || |||||| |||||||| ||||||||||| |||||   |||||| ||||
Sbjct: 19219042 atttccatagctgctccattggaagcccgcgctctgcagcaacatccttgaactgcctca 19219101

                                                                    
Query: 285      tcatctgcgtcgccttgacggtagcccttgcattgttgagaggattcttgct 336
                |||| || |||||||||| |||||| |||||||||||||| || ||||||||
Sbjct: 19219102 tcatttgggtcgccttgatggtagctcttgcattgttgagggggttcttgct 19219153

>gb|AC137925.2| Oryza sativa chromosome 3 BAC OSJNBb0047D08 genomic sequence,
            complete sequence
          Length = 140507

 Score =  103 bits (52), Expect = 4e-19
 Identities = 97/112 (86%)
 Strand = Plus / Plus

                                                                        
Query: 225  atttccataactcctccatcggaagcccacgctctgcagccacatctgagaactgtctca 284
            ||||||||| || |||||| |||||||| ||||||||||| |||||   |||||| ||||
Sbjct: 9162 atttccatagctgctccattggaagcccgcgctctgcagcaacatccttgaactgcctca 9221

                                                                
Query: 285  tcatctgcgtcgccttgacggtagcccttgcattgttgagaggattcttgct 336
            |||| || |||||||||| |||||| |||||||||||||| || ||||||||
Sbjct: 9222 tcatttgggtcgccttgatggtagctcttgcattgttgagggggttcttgct 9273

>gb|AC135226.4| Oryza sativa chromosome 3 BAC OSJNBa0037J17 genomic sequence, complete
             sequence
          Length = 150137

 Score =  103 bits (52), Expect = 4e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                         
Query: 225   atttccataactcctccatcggaagcccacgctctgcagccacatctgagaactgtctca 284
             ||||||||| || |||||| |||||||| ||||||||||| |||||   |||||| ||||
Sbjct: 18461 atttccatagctgctccattggaagcccgcgctctgcagcaacatccttgaactgcctca 18402

                                                                 
Query: 285   tcatctgcgtcgccttgacggtagcccttgcattgttgagaggattcttgct 336
             |||| || |||||||||| |||||| |||||||||||||| || ||||||||
Sbjct: 18401 tcatttgggtcgccttgatggtagctcttgcattgttgagggggttcttgct 18350

>dbj|AK119178.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-G07, full
            insert sequence
          Length = 1281

 Score =  103 bits (52), Expect = 4e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                        
Query: 225  atttccataactcctccatcggaagcccacgctctgcagccacatctgagaactgtctca 284
            ||||||||| || |||||| |||||||| ||||||||||| |||||   |||||| ||||
Sbjct: 1028 atttccatagctgctccattggaagcccgcgctctgcagcaacatccttgaactgcctca 969

                                                                
Query: 285  tcatctgcgtcgccttgacggtagcccttgcattgttgagaggattcttgct 336
            |||| || |||||||||| |||||| |||||||||||||| || ||||||||
Sbjct: 968  tcatttgggtcgccttgatggtagctcttgcattgttgagggggttcttgct 917

>dbj|AK065820.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042D13, full
            insert sequence
          Length = 1296

 Score =  103 bits (52), Expect = 4e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                        
Query: 225  atttccataactcctccatcggaagcccacgctctgcagccacatctgagaactgtctca 284
            ||||||||| || |||||| |||||||| ||||||||||| |||||   |||||| ||||
Sbjct: 1034 atttccatagctgctccattggaagcccgcgctctgcagcaacatccttgaactgcctca 975

                                                                
Query: 285  tcatctgcgtcgccttgacggtagcccttgcattgttgagaggattcttgct 336
            |||| || |||||||||| |||||| |||||||||||||| || ||||||||
Sbjct: 974  tcatttgggtcgccttgatggtagctcttgcattgttgagggggttcttgct 923

>dbj|AK060924.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-H10, full
            insert sequence
          Length = 1201

 Score =  103 bits (52), Expect = 4e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                        
Query: 225  atttccataactcctccatcggaagcccacgctctgcagccacatctgagaactgtctca 284
            ||||||||| || |||||| |||||||| ||||||||||| |||||   |||||| ||||
Sbjct: 1038 atttccatagctgctccattggaagcccgcgctctgcagcaacatccttgaactgcctca 979

                                                                
Query: 285  tcatctgcgtcgccttgacggtagcccttgcattgttgagaggattcttgct 336
            |||| || |||||||||| |||||| |||||||||||||| || ||||||||
Sbjct: 978  tcatttgggtcgccttgatggtagctcttgcattgttgagggggttcttgct 927

>gb|BT019227.1| Zea mays clone Contig900.F mRNA sequence
          Length = 584

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                       
Query: 222 atcatttccataactcctccatcggaagcccacgctctgcagccacatctgagaactgtc 281
           |||||||||| | ||||||||| ||||  ||||||||  |||| |||||   ||||||  
Sbjct: 272 atcatttccacagctcctccattggaataccacgctcctcagcgacatccttgaactgct 331

                                
Query: 282 tcatcatctgcgtcgccttga 302
           |||||||||||||||||||||
Sbjct: 332 tcatcatctgcgtcgccttga 352

>gb|AY107457.1| Zea mays PCO103582 mRNA sequence
          Length = 840

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                       
Query: 222 atcatttccataactcctccatcggaagcccacgctctgcagccacatctgagaactgtc 281
           |||||||||| | ||||||||| ||||  ||||||||  |||| |||||   ||||||  
Sbjct: 576 atcatttccacagctcctccattggaataccacgctcctcagcgacatccttgaactgct 517

                                
Query: 282 tcatcatctgcgtcgccttga 302
           |||||||||||||||||||||
Sbjct: 516 tcatcatctgcgtcgccttga 496

>emb|CR391913.7| Zebrafish DNA sequence from clone DKEY-118P6 in linkage group 5,
             complete sequence
          Length = 190731

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 225   atttccataactcctccatcggaa 248
             ||||||||||||||||||||||||
Sbjct: 57705 atttccataactcctccatcggaa 57682

>ref|XM_736739.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000305.01.0)
            partial mRNA
          Length = 2391

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 210  tgattttgtttcatcatttcca 231
            ||||||||||||||||||||||
Sbjct: 1296 tgattttgtttcatcatttcca 1275

>ref|XM_481975.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1143

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 231 ataactcctccatcggaagcc 251
           |||||||||||||||||||||
Sbjct: 23  ataactcctccatcggaagcc 3

>gb|AC107065.5| Bos taurus clone rp42-513g13, complete sequence
          Length = 175949

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 257   tctgcagccacatctgagaac 277
             |||||||||||||||||||||
Sbjct: 66674 tctgcagccacatctgagaac 66694

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 231      ataactcctccatcggaagcc 251
                |||||||||||||||||||||
Sbjct: 16845630 ataactcctccatcggaagcc 16845650

>dbj|AP005817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_F01
          Length = 119248

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 231   ataactcctccatcggaagcc 251
             |||||||||||||||||||||
Sbjct: 58995 ataactcctccatcggaagcc 59015

>emb|CR974592.5| Mouse DNA sequence from clone RP23-56C15 on chromosome 12, complete
             sequence
          Length = 201549

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 208   aatgattttgtttcatcattt 228
             |||||||||||||||||||||
Sbjct: 34394 aatgattttgtttcatcattt 34374

>gb|AF246683.1| Pemphigus spyrothecae microsatellite 98PS12 sequence
          Length = 650

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 134 aatatatagatacaacagga 153
           ||||||||||||||||||||
Sbjct: 543 aatatatagatacaacagga 524

>gb|AC146500.2| Danio rerio clone CH211-130P22, complete sequence
          Length = 165269

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 202   cagtttaatgattttgtttcatcatttc 229
             ||||||| |||||||| |||||||||||
Sbjct: 88282 cagtttagtgattttgcttcatcatttc 88309

>emb|CR392003.9| Zebrafish DNA sequence from clone DKEY-242N9 in linkage group 3,
             complete sequence
          Length = 182043

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 202   cagtttaatgattttgtttcatcatttc 229
             ||||||| |||||||| |||||||||||
Sbjct: 99499 cagtttagtgattttgcttcatcatttc 99472

>emb|Z68338.1|CET24B8 Caenorhabditis elegans Cosmid T24B8, complete sequence
          Length = 38779

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   agtttaatgattttgtttca 222
             ||||||||||||||||||||
Sbjct: 15035 agtttaatgattttgtttca 15054

>ref|XM_948126.1| Theileria annulata strain Ankara hypothetical protein (TA09090)
            partial mRNA
          Length = 1365

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 209  atgattttgtttcatcatttccat 232
            |||| |||||||||||||||||||
Sbjct: 1115 atgaatttgtttcatcatttccat 1138

>emb|BX537121.4| Zebrafish DNA sequence from clone CH211-196P24 in linkage group 3,
              complete sequence
          Length = 184845

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 202    cagtttaatgattttgtttcatcatttc 229
              ||||||| |||||||| |||||||||||
Sbjct: 168995 cagtttagtgattttgcttcatcatttc 168968

>emb|AL928727.8| Zebrafish DNA sequence from clone CH211-130P8 in linkage group 5,
              complete sequence
          Length = 172861

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 225    atttccataactcctccatcggaa 248
              ||||||||| ||||||||||||||
Sbjct: 129015 atttccatatctcctccatcggaa 129038

>gb|AC140192.3| Mus musculus BAC clone RP24-377O11 from 6, complete sequence
          Length = 160574

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 210   tgattttgtttcatcatttccata 233
             |||||||||||||| |||||||||
Sbjct: 67725 tgattttgtttcataatttccata 67702

>gb|AC140466.3| Mus musculus BAC clone RP24-392F9 from 6, complete sequence
          Length = 148392

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 210    tgattttgtttcatcatttccata 233
              |||||||||||||| |||||||||
Sbjct: 143508 tgattttgtttcataatttccata 143485

>emb|AL844193.6| Zebrafish DNA sequence from clone DKEY-28J3, complete sequence
          Length = 210900

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   aatgattttgtttcatcatt 227
             ||||||||||||||||||||
Sbjct: 54435 aatgattttgtttcatcatt 54454


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,188,323
Number of Sequences: 3902068
Number of extensions: 3188323
Number of successful extensions: 54706
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54604
Number of HSP's gapped (non-prelim): 102
length of query: 344
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 322
effective length of database: 17,147,199,772
effective search space: 5521398326584
effective search space used: 5521398326584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)