ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet18h07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ADA1B_MOUSE (P97717) Alpha-1B adrenergic receptor (Alpha 1B-adre... 28 6.4
2ADA1B_RAT (P15823) Alpha-1B adrenergic receptor (Alpha 1B-adreno... 28 6.4
3ADA1B_MESAU (P18841) Alpha-1B adrenergic receptor (Alpha 1B-adre... 28 6.4
4ADA1B_HUMAN (P35368) Alpha-1B adrenergic receptor (Alpha 1B-adre... 28 8.4
5ADA1B_CANFA (P11615) Alpha-1B adrenergic receptor (Alpha 1B-adre... 28 8.4

>ADA1B_MOUSE (P97717) Alpha-1B adrenergic receptor (Alpha 1B-adrenoceptor)|
           (Alpha 1B-adrenoreceptor)
          Length = 514

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -3

Query: 145 YFNVCLYTSVYSFLVKTFKRLIFRNRGSNC 56
           YFN CL   +Y    K FKR   R  G  C
Sbjct: 337 YFNSCLNPIIYPCSSKEFKRAFMRILGCQC 366



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>ADA1B_RAT (P15823) Alpha-1B adrenergic receptor (Alpha 1B-adrenoceptor)|
           (Alpha 1B-adrenoreceptor)
          Length = 515

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -3

Query: 145 YFNVCLYTSVYSFLVKTFKRLIFRNRGSNC 56
           YFN CL   +Y    K FKR   R  G  C
Sbjct: 338 YFNSCLNPIIYPCSSKEFKRAFMRILGCQC 367



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>ADA1B_MESAU (P18841) Alpha-1B adrenergic receptor (Alpha 1B-adrenoceptor)|
           (Alpha 1B-adrenoreceptor)
          Length = 515

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -3

Query: 145 YFNVCLYTSVYSFLVKTFKRLIFRNRGSNC 56
           YFN CL   +Y    K FKR   R  G  C
Sbjct: 338 YFNSCLNPIIYPCSSKEFKRAFMRILGCQC 367



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>ADA1B_HUMAN (P35368) Alpha-1B adrenergic receptor (Alpha 1B-adrenoceptor)|
           (Alpha 1B-adrenoreceptor)
          Length = 519

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -3

Query: 145 YFNVCLYTSVYSFLVKTFKRLIFRNRGSNC 56
           YFN CL   +Y    K FKR   R  G  C
Sbjct: 338 YFNSCLNPIIYPCSSKEFKRAFVRILGCQC 367



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>ADA1B_CANFA (P11615) Alpha-1B adrenergic receptor (Alpha 1B-adrenoceptor)|
           (Alpha 1B-adrenoreceptor) (Fragment)
          Length = 417

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -3

Query: 145 YFNVCLYTSVYSFLVKTFKRLIFRNRGSNC 56
           YFN CL   +Y    K FKR   R  G  C
Sbjct: 241 YFNSCLNPIIYPCSSKEFKRAFVRILGCQC 270


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,577,252
Number of Sequences: 219361
Number of extensions: 497948
Number of successful extensions: 1145
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 80,573,946
effective HSP length: 49
effective length of database: 69,825,257
effective search space used: 1675806168
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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