ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet18e04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein 660 0.0
2gb|BT018400.1| Zea mays clone EL01N0323H01.d mRNA sequence 111 2e-21
3gb|BT017668.1| Zea mays clone EL01N0441H09.c mRNA sequence 111 2e-21
4gb|DQ207683.1| Zea mays cultivar inbred line Mo17 IDP251 marker 111 2e-21
5gb|DQ207682.1| Zea mays cultivar B73 IDP251 marker 111 2e-21
6gb|AY243800.1| Zea mays plasma membrane intrinsic protein (PIP1-... 111 2e-21
7emb|X82633.1|ZMTRAPRO Z.mays mRNA for transmembrane protein 111 2e-21
8gb|AF326488.1|AF326488 Zea mays plasma membrane integral protein... 111 2e-21
9gb|AF326487.1|AF326487 Zea mays plasma membrane integral protein... 111 2e-21
10gb|AY103580.1| Zea mays PCO072544 mRNA sequence 111 2e-21
11gb|AF131201.1| Zea mays plasma membrane MIP protein (pip1-2) mRN... 103 4e-19
12emb|AJ310639.1|HVU310639 Hordeum vulgare partial pip1 gene for p... 96 9e-17
13gb|AY170841.1| Axonopus compressus plasma membrane MIP protein m... 88 2e-14
14gb|U87981.1|SBU87981 Sorghum bicolor membrane intrinsic protein ... 86 9e-14
15emb|AJ224327.1|OSAJ4327 Oryza sativa mRNA for aquaporin, complet... 82 1e-12
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
17dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
18dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
19dbj|AK104658.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 1e-12
20dbj|AK103807.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 1e-12
21dbj|AK061769.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 1e-12
22gb|AF022737.1|AF022737 Oryza sativa transmembrane protein mRNA, ... 82 1e-12
23dbj|AB009665.1| Oryza sativa (japonica cultivar-group) mRNA for ... 82 1e-12
24ref|XM_473480.1| Oryza sativa (japonica cultivar-group), predic... 80 6e-12
25emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4,... 80 6e-12
26dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 80 6e-12
27dbj|AK104736.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 6e-12
28dbj|AK098849.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 6e-12
29dbj|AK065188.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 6e-12
30dbj|AK058323.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 6e-12
31dbj|AB009309.2| Hordeum vulgare HvPIP1;5 mRNA, complete cds 68 2e-08
32dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds 64 3e-07
33ref|XM_468463.1| Oryza sativa (japonica cultivar-group), mRNA 56 8e-05
34dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic D... 56 8e-05
35dbj|AK102174.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 8e-05
36gb|AF366564.1| Triticum aestivum aquaporin PIP1 (Pip1) mRNA, com... 56 8e-05
37dbj|AB029325.1| Oryza sativa gene for water channel protein RWC3... 56 8e-05
38dbj|AB016623.1| Oryza sativa gene for RWC-3, complete cds 56 8e-05
39gb|AF141643.1|AF141643 Vitis berlandieri x Vitis rupestris putat... 54 3e-04
40emb|AJ314584.1|POC314584 Posidonia oceanica mRNA for putative pl... 52 0.001
41emb|AJ271796.1|ZMA271796 Zea mays mRNA for plasma membrane intri... 50 0.005
42gb|AF326489.1|AF326489 Zea mays plasma membrane integral protein... 50 0.005
43gb|AY107675.1| Zea mays PCO112712 mRNA sequence 50 0.005
44gb|AY547266.2| Ipomoea nil aquaporin-like protein (AQP1) mRNA, c... 48 0.020
45gb|AF188843.1|AF188843 Vitis vinifera cultivar Pinot Noir plasma... 48 0.020
46gb|AY611006.1| Xerophyta humilis isolate HC398 PIP1 aquaporin mR... 46 0.077
47gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 46 0.077
48emb|AJ843992.1| Plantago major partial mRNA for aquaporin 2 (aqp... 46 0.077
49gb|DQ149581.1| Xerophyta humilis PIP1 aquaporin mRNA, complete cds 46 0.077
50emb|AL772318.6| Mouse DNA sequence from clone RP23-77I17 on chro... 46 0.077
51emb|X95640.1|BOMIPBTCP B.oleracea mRNA for transmembrane channel... 44 0.31
52emb|AL031227.1|DMC66A1 Drosophila melanogaster cosmid 66A1 44 0.31
53emb|AJ001292.1|CPPIPA2 Craterostigma plantagineum mRNA for major... 44 0.31
54gb|AC023747.4| Drosophila melanogaster X BAC RP98-38L1 (Roswell ... 44 0.31
55ref|NM_131946.3| Drosophila melanogaster CG12184-RA (CG12184), mRNA 44 0.31
56gb|AY051507.1| Drosophila melanogaster GH15731 full length cDNA 44 0.31
57emb|AJ699398.2| Chenopodium rubrum mRNA for aquaporin PIP1 (PIP1... 44 0.31
58gb|AE003431.5| Drosophila melanogaster chromosome X, section 15 ... 44 0.31
59gb|AC153823.5| Mus musculus 10 BAC RP23-11M21 (Roswell Park Canc... 42 1.2
60gb|AC153943.3| Mus musculus 10 BAC RP24-408O23 (Roswell Park Can... 42 1.2
61dbj|AB002149.1| Nicotiana excelsior mRNA for water channel prote... 42 1.2
62gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 4.8
63ref|NM_130159.2| Arabidopsis thaliana PIP1B; water channel AT2G4... 40 4.8
64ref|XM_550604.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.8
65ref|XM_521983.1| PREDICTED: Pan troglodytes similar to expressed... 40 4.8
66ref|NM_001005210.1| Homo sapiens leucine rich repeat containing ... 40 4.8
67gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete se... 40 4.8
68gb|AF499725.1| Thellungiella halophila plasma membrane intrinsic... 40 4.8
69gb|AC007528.5| Homo sapiens 12 BAC RP11-473N11 (Roswell Park Can... 40 4.8
70emb|AL117377.18|HSJ1037B9 Human DNA sequence from clone RP5-1037... 40 4.8
71emb|Z17424.1|ATORFA Arabidopsis thaliana mRNA for PIP1b protein 40 4.8
72emb|X95639.1|BOMIPATCP B.oleracea mRNA for transmembrane channel... 40 4.8
73gb|AY091254.1| Arabidopsis thaliana putative aquaporin protein (... 40 4.8
74emb|X68293.1|ATRNATPR A.thaliana mRNA for transmembrane protein A 40 4.8
75gb|AY063931.1| Arabidopsis thaliana putative aquaporin, plasma m... 40 4.8
76gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 4.8
77emb|AJ849322.1| Populus tremula x Populus tremuloides mRNA for p... 40 4.8
78gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 4.8
79gb|AC182472.3| Pan troglodytes BAC clone CH251-394C9 from chromo... 40 4.8
80dbj|AK127591.1| Homo sapiens cDNA FLJ45686 fis, clone FCBBF3012443 40 4.8
81gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 4.8
82gb|AC004665.3| Arabidopsis thaliana chromosome 2 clone F4I18 map... 40 4.8
83gb|AC016493.14| Homo sapiens chromosome 18, clone RP11-58G13, co... 40 4.8
84gb|AF141898.1|AF141898 Vitis berlandieri x Vitis rupestris putat... 40 4.8
85gb|AC023577.6| Homo sapiens chromosome 18, clone RP11-645D5, com... 40 4.8
86dbj|AK222086.1| Arabidopsis thaliana mRNA for aquaporin, partial... 40 4.8
87gb|AY049238.1| Arabidopsis thaliana clone RAFL08-10-H13(R13205),... 40 4.8
88gb|AF299051.1|AF299051 Brassica oleracea aquaporin PIP1b2 mRNA, ... 40 4.8
89gb|AF299050.1|AF299050 Brassica oleracea aquaporin PIP1b1 mRNA, ... 40 4.8
90dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
91emb|BX820173.1|CNS0A8G3 Arabidopsis thaliana Full-length cDNA Co... 40 4.8
92emb|BX819664.1|CNS0A8JV Arabidopsis thaliana Full-length cDNA Co... 40 4.8
93emb|BX820969.1|CNS0A7WJ Arabidopsis thaliana Full-length cDNA Co... 40 4.8
94emb|BX819791.1|CNS0A7WA Arabidopsis thaliana Full-length cDNA Co... 40 4.8
95gb|AC011500.7| Homo sapiens chromosome 19 clone CTB-60E11, compl... 40 4.8
96gb|AY957387.1| Pseudomonas stutzeri DnrE (dnrE) gene, complete c... 40 4.8
97gb|AY048294.1| Arabidopsis thaliana At2g45960/F4I18.6 mRNA, comp... 40 4.8
98dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
99gb|AF139814.1|AF139814 Triticum aestivum plasma membrane intrins... 40 4.8
100emb|AJ243257.1|SNA243257 Streptomyces natalensis plasmid pSNA1 i... 40 4.8
101emb|Z17399.1|ATORFB Arabidopsis thaliana PIP1b gene 40 4.8
102dbj|AP001786.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 4.8
103gb|DQ151348.1| Petromyzon marinus clone T.D8 variable lymphocyte... 40 4.8
104gb|AF004293.1|AF004293 Brassica rapa aquaporin (MOD) mRNA, compl... 40 4.8
105dbj|AB030695.1| Raphanus sativus PAQ1b mRNA for plasma membrane ... 40 4.8 
>emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein
          Length = 1225

 Score =  660 bits (333), Expect = 0.0
 Identities = 345/349 (98%)
 Strand = Plus / Minus

                                                                        
Query: 7    aacaactttgctggatttgcacaacaacgagcagtactacacaacaactgagcactgatg 66
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 aacaactttgctggatttgcacaacaacgagcagtactacacaacaactgagcactgatg 1140

                                                                        
Query: 67   agattacatacaagtcctctgtctgggttcaggtgaatacagagcaagagcaagagtagc 126
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1139 agattacatacaagtcctctgtctgggttcaggtgaatacagagcaagagcaagagtagt 1080

                                                                        
Query: 127  acatcaaacttggaagacaaattggaattccacggtaacacggacgatgggaagagaggg 186
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1079 acatcaaacttggaagacaaattggaattccacggtaacagggacgatgggaagagaggg 1020

                                                                        
Query: 187  ccgcccccatcaaaaagaaattcactcagaacgcgcagtttgctcttcgggttgggatgg 246
            |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1019 ccgcccccatcagaaagaaattcactcagaacacgcagtttgctcttcgggttgggatgg 960

                                                                        
Query: 247  catctttctttgtagcagcagcttaggacttggtcttgaatgggatcgctctgatgacca 306
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959  catctttctttgtagcagcagcttaggacttggtcttgaatgggatcgctctgatgacca 900

                                                             
Query: 307  cctggtggtagatggcggccagcgcggcgccgatgaaggggccgaccca 355
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899  cctggtggtagatggcggccagcgcggcgccgatgaaggggccgaccca 851
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>gb|BT018400.1| Zea mays clone EL01N0323H01.d mRNA sequence
          Length = 1154

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 264 gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcg 323
           |||||||| ||| || ||||||| ||||| || ||||||| |||||||||||||||||| 
Sbjct: 834 gcagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggca 775

                                           
Query: 324 gccagcgcggcgccgatgaaggggccgaccca 355
           ||||| ||||||||||||||||||||||||||
Sbjct: 774 gccagggcggcgccgatgaaggggccgaccca 743
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>gb|BT017668.1| Zea mays clone EL01N0441H09.c mRNA sequence
          Length = 698

 Score =  111 bits (56), Expect = 2e-21
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
           ||||||| |||||||| ||||||| |||||||||||||||||| |||||||| |||||||
Sbjct: 425 tcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccga 366

                           
Query: 340 tgaaggggccgaccca 355
           ||||||||||||||||
Sbjct: 365 tgaaggggccgaccca 350
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>gb|DQ207683.1| Zea mays cultivar inbred line Mo17 IDP251 marker
          Length = 824

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                       
Query: 264 gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcg 323
           |||||||| ||| || ||||||| ||||| || ||||||| |||||||||||||||||| 
Sbjct: 244 gcagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggca 303

                                           
Query: 324 gccagcgcggcgccgatgaaggggccgaccca 355
           ||||| ||||||||||||||||||||||||||
Sbjct: 304 gccagggcggcgccgatgaaggggccgaccca 335
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>gb|DQ207682.1| Zea mays cultivar B73 IDP251 marker
          Length = 763

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 264 gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcg 323
           |||||||| ||| || ||||||| ||||| || ||||||| |||||||||||||||||| 
Sbjct: 533 gcagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggca 474

                                           
Query: 324 gccagcgcggcgccgatgaaggggccgaccca 355
           ||||| ||||||||||||||||||||||||||
Sbjct: 473 gccagggcggcgccgatgaaggggccgaccca 442
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>gb|AY243800.1| Zea mays plasma membrane intrinsic protein (PIP1-1) mRNA, complete
           cds
          Length = 1086

 Score =  111 bits (56), Expect = 2e-21
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
           ||||||| |||||||| ||||||| |||||||||||||||||| |||||||| |||||||
Sbjct: 856 tcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccga 797

                           
Query: 340 tgaaggggccgaccca 355
           ||||||||||||||||
Sbjct: 796 tgaaggggccgaccca 781
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>emb|X82633.1|ZMTRAPRO Z.mays mRNA for transmembrane protein
          Length = 1169

 Score =  111 bits (56), Expect = 2e-21
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
           ||||||| |||||||| ||||||| |||||||||||||||||| |||||||| |||||||
Sbjct: 913 tcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccga 854

                           
Query: 340 tgaaggggccgaccca 355
           ||||||||||||||||
Sbjct: 853 tgaaggggccgaccca 838
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>gb|AF326488.1|AF326488 Zea mays plasma membrane integral protein ZmPIP1-4 mRNA, complete
           cds
          Length = 1153

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 264 gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcg 323
           |||||||| ||| || ||||||| ||||| || ||||||| |||||||||||||||||| 
Sbjct: 984 gcagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggca 925

                                           
Query: 324 gccagcgcggcgccgatgaaggggccgaccca 355
           ||||| ||||||||||||||||||||||||||
Sbjct: 924 gccagggcggcgccgatgaaggggccgaccca 893
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>gb|AF326487.1|AF326487 Zea mays plasma membrane integral protein ZmPIP1-3 mRNA, complete
           cds
          Length = 1296

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                       
Query: 264 gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcg 323
           |||||||| ||| || ||||||| ||||| || ||||||| |||||||||||||||||| 
Sbjct: 979 gcagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggca 920

                                           
Query: 324 gccagcgcggcgccgatgaaggggccgaccca 355
           ||||| ||||||||||||||||||||||||||
Sbjct: 919 gccagggcggcgccgatgaaggggccgaccca 888
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>gb|AY103580.1| Zea mays PCO072544 mRNA sequence
          Length = 1633

 Score =  111 bits (56), Expect = 2e-21
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                        
Query: 264  gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcg 323
            |||||||| ||| || ||||||| ||||| || ||||||| |||||||||||||||||| 
Sbjct: 1308 gcagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggca 1249

                                            
Query: 324  gccagcgcggcgccgatgaaggggccgaccca 355
            ||||| ||||||||||||||||||||||||||
Sbjct: 1248 gccagggcggcgccgatgaaggggccgaccca 1217
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>gb|AF131201.1| Zea mays plasma membrane MIP protein (pip1-2) mRNA, complete cds
          Length = 1280

 Score =  103 bits (52), Expect = 4e-19
 Identities = 82/92 (89%)
 Strand = Plus / Minus

                                                                       
Query: 264 gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcg 323
           |||||||| ||| || ||||||| ||||| |||||||||| |||||||||||||||||| 
Sbjct: 935 gcagcttaagacctgctcttgaacgggatggctctgatgatcacctggtggtagatggca 876

                                           
Query: 324 gccagcgcggcgccgatgaaggggccgaccca 355
           ||||| || ||||| |||||||||||||||||
Sbjct: 875 gccagggcagcgccaatgaaggggccgaccca 844
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>emb|AJ310639.1|HVU310639 Hordeum vulgare partial pip1 gene for putative aquaporin
          Length = 1291

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 48/48 (100%)
 Strand = Plus / Minus

                                                            
Query: 308  ctggtggtagatggcggccagcgcggcgccgatgaaggggccgaccca 355
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1291 ctggtggtagatggcggccagcgcggcgccgatgaaggggccgaccca 1244
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>gb|AY170841.1| Axonopus compressus plasma membrane MIP protein mRNA, partial cds
          Length = 423

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
           ||||||| ||||| || ||||||| ||||||||||||||||||||| || || ||||| |
Sbjct: 412 tcttgaacgggatggccctgatgatcacctggtggtagatggcggctagggcagcgccaa 353

                           
Query: 340 tgaaggggccgaccca 355
           ||||||||||||||||
Sbjct: 352 tgaaggggccgaccca 337
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>gb|U87981.1|SBU87981 Sorghum bicolor membrane intrinsic protein (Mip1) mRNA, partial cds
          Length = 539

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                       
Query: 265 cagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcgg 324
           ||||||| ||| || ||||||| ||||| || ||||||| |||||||||||||||||| |
Sbjct: 359 cagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggcag 300

                                          
Query: 325 ccagcgcggcgccgatgaaggggccgaccca 355
           |||| || || || |||||||||||||||||
Sbjct: 299 ccagggcagcaccaatgaaggggccgaccca 269
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>emb|AJ224327.1|OSAJ4327 Oryza sativa mRNA for aquaporin, complete CDS
          Length = 1139

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                       
Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggcc 326
           ||||| ||| || |||||||||||||||| ||||||| |||||||||||||||||| |||
Sbjct: 896 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 837

                                        
Query: 327 agcgcggcgccgatgaaggggccgaccca 355
           || || ||||| | |||||| || |||||
Sbjct: 836 agggcagcgccaacgaagggaccaaccca 808
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                            
Query: 267      gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggcc 326
                ||||| ||| || |||||||||||||||| ||||||| |||||||||||||||||| |||
Sbjct: 27065653 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 27065594

                                             
Query: 327      agcgcggcgccgatgaaggggccgaccca 355
                || || ||||| | |||||| || |||||
Sbjct: 27065593 agggcagcgccaacgaagggaccaaccca 27065565



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 280      tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
                ||||||| ||||| |||||||| ||||||  |||||||||||| ||||| || || ||||
Sbjct: 35369403 tcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgctccga 35369344

                    
Query: 340      tgaa 343
                ||||
Sbjct: 35369343 tgaa 35369340
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>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1486_E07
          Length = 110494

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                         
Query: 267   gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggcc 326
             ||||| ||| || |||||||||||||||| ||||||| |||||||||||||||||| |||
Sbjct: 37302 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 37243

                                          
Query: 327   agcgcggcgccgatgaaggggccgaccca 355
             || || ||||| | |||||| || |||||
Sbjct: 37242 agggcagcgccaacgaagggaccaaccca 37214
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>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0461B08
          Length = 153743

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                          
Query: 267    gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggcc 326
              ||||| ||| || |||||||||||||||| ||||||| |||||||||||||||||| |||
Sbjct: 118855 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 118796

                                           
Query: 327    agcgcggcgccgatgaaggggccgaccca 355
              || || ||||| | |||||| || |||||
Sbjct: 118795 agggcagcgccaacgaagggaccaaccca 118767
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>dbj|AK104658.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D06, full
           insert sequence
          Length = 1128

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                       
Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggcc 326
           ||||| ||| || |||||||||||||||| ||||||| |||||||||||||||||| |||
Sbjct: 929 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 870

                                        
Query: 327 agcgcggcgccgatgaaggggccgaccca 355
           || || ||||| | |||||| || |||||
Sbjct: 869 agggcagcgccaacgaagggaccaaccca 841
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>dbj|AK103807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147A07, full
           insert sequence
          Length = 1205

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                       
Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggcc 326
           ||||| ||| || |||||||||||||||| ||||||| |||||||||||||||||| |||
Sbjct: 984 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 925

                                        
Query: 327 agcgcggcgccgatgaaggggccgaccca 355
           || || ||||| | |||||| || |||||
Sbjct: 924 agggcagcgccaacgaagggaccaaccca 896
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>dbj|AK061769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C05, full
           insert sequence
          Length = 1136

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                       
Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggcc 326
           ||||| ||| || |||||||||||||||| ||||||| |||||||||||||||||| |||
Sbjct: 929 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 870

                                        
Query: 327 agcgcggcgccgatgaaggggccgaccca 355
           || || ||||| | |||||| || |||||
Sbjct: 869 agggcagcgccaacgaagggaccaaccca 841
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>gb|AF022737.1|AF022737 Oryza sativa transmembrane protein mRNA, complete cds
          Length = 1140

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                       
Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggcc 326
           ||||| ||| || |||||||||||||||| ||||||| |||||||||||||||||| |||
Sbjct: 924 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 865

                                        
Query: 327 agcgcggcgccgatgaaggggccgaccca 355
           || || ||||| | |||||| || |||||
Sbjct: 864 agggcagcgccaacgaagggaccaaccca 836
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>dbj|AB009665.1| Oryza sativa (japonica cultivar-group) mRNA for water channel
           protein, complete cds
          Length = 1116

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                       
Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtagatggcggcc 326
           ||||| ||| || |||||||||||||||| ||||||| |||||||||||||||||| |||
Sbjct: 927 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 868

                                        
Query: 327 agcgcggcgccgatgaaggggccgaccca 355
           || || ||||| | |||||| || |||||
Sbjct: 867 agggcagcgccaacgaagggaccaaccca 839
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>ref|XM_473480.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 849

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
           |||||||||| || || |||||||||||||||||||||||||| || || || ||||| |
Sbjct: 838 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 779

                           
Query: 340 tgaaggggccgaccca 355
           |||||||||| |||||
Sbjct: 778 tgaaggggccaaccca 763
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>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11,
             complete sequence
          Length = 147806

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                         
Query: 280   tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
             |||||||||| || || |||||||||||||||||||||||||| || || || ||||| |
Sbjct: 28669 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 28610

                             
Query: 340   tgaaggggccgaccca 355
             |||||||||| |||||
Sbjct: 28609 tgaaggggccaaccca 28594
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                            
Query: 280      tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
                |||||||||| || || |||||||||||||||||||||||||| || || || ||||| |
Sbjct: 28021443 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 28021384

                                
Query: 340      tgaaggggccgaccca 355
                |||||||||| |||||
Sbjct: 28021383 tgaaggggccaaccca 28021368
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>dbj|AK104736.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D02, full
           insert sequence
          Length = 1163

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
           |||||||||| || || |||||||||||||||||||||||||| || || || ||||| |
Sbjct: 915 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 856

                           
Query: 340 tgaaggggccgaccca 355
           |||||||||| |||||
Sbjct: 855 tgaaggggccaaccca 840
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>dbj|AK098849.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E16, full
           insert sequence
          Length = 1164

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
           |||||||||| || || |||||||||||||||||||||||||| || || || ||||| |
Sbjct: 916 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 857

                           
Query: 340 tgaaggggccgaccca 355
           |||||||||| |||||
Sbjct: 856 tgaaggggccaaccca 841
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>dbj|AK065188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E02, full
           insert sequence
          Length = 1167

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
           |||||||||| || || |||||||||||||||||||||||||| || || || ||||| |
Sbjct: 918 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 859

                           
Query: 340 tgaaggggccgaccca 355
           |||||||||| |||||
Sbjct: 858 tgaaggggccaaccca 843
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>dbj|AK058323.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B07, full
            insert sequence
          Length = 1462

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                        
Query: 280  tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
            |||||||||| || || |||||||||||||||||||||||||| || || || ||||| |
Sbjct: 1214 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 1155

                            
Query: 340  tgaaggggccgaccca 355
            |||||||||| |||||
Sbjct: 1154 tgaaggggccaaccca 1139
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>dbj|AB009309.2| Hordeum vulgare HvPIP1;5 mRNA, complete cds
          Length = 1147

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 294 gctctgatgaccacctggtggtagatggcggccagcgcggcgccgatgaaggggccgacc 353
           |||||||||| |||||||||||||| ||| ||||| |||||||| | ||||||||| |||
Sbjct: 927 gctctgatgatcacctggtggtagacggctgccagggcggcgccaacgaaggggcccacc 868

             
Query: 354 ca 355
           ||
Sbjct: 867 ca 866
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>dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds
          Length = 1285

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
           ||||||| |||||||| ||||| ||||||  ||||||||| || |||||||| |||||||
Sbjct: 945 tcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccga 886

               
Query: 340 tgaa 343
           ||||
Sbjct: 885 tgaa 882
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>ref|XM_468463.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1319

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                        
Query: 280  tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
            ||||||| ||||| |||||||| ||||||  |||||||||||| ||||| || || ||||
Sbjct: 1008 tcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgctccga 949

                
Query: 340  tgaa 343
            ||||
Sbjct: 948  tgaa 945
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>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1136_C04
          Length = 103194

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                         
Query: 280   tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
             ||||||| ||||| |||||||| ||||||  |||||||||||| ||||| || || ||||
Sbjct: 29951 tcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgctccga 29892

                 
Query: 340   tgaa 343
             ||||
Sbjct: 29891 tgaa 29888
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>dbj|AK102174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086K14, full
            insert sequence
          Length = 1318

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                        
Query: 280  tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
            ||||||| ||||| |||||||| ||||||  |||||||||||| ||||| || || ||||
Sbjct: 1007 tcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgctccga 948

                
Query: 340  tgaa 343
            ||||
Sbjct: 947  tgaa 944
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>gb|AF366564.1| Triticum aestivum aquaporin PIP1 (Pip1) mRNA, complete cds
          Length = 1248

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
           ||||||| ||||| || ||||| ||||||  |||||||||||| |||||||| || ||||
Sbjct: 930 tcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcaccga 871

               
Query: 340 tgaa 343
           ||||
Sbjct: 870 tgaa 867
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>dbj|AB029325.1| Oryza sativa gene for water channel protein RWC3, promoter region and
            complete cds
          Length = 5325

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                        
Query: 280  tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
            ||||||| ||||| |||||||| ||||||  |||||||||||| ||||| || || ||||
Sbjct: 4906 tcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgctccga 4847

                
Query: 340  tgaa 343
            ||||
Sbjct: 4846 tgaa 4843
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>dbj|AB016623.1| Oryza sativa gene for RWC-3, complete cds
          Length = 1403

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
           ||||||| ||||| |||||||| ||||||  |||||||||||| ||||| || || ||||
Sbjct: 985 tcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgctccga 926

               
Query: 340 tgaa 343
           ||||
Sbjct: 925 tgaa 922
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>gb|AF141643.1|AF141643 Vitis berlandieri x Vitis rupestris putative aquaporin PIP1-1
           (PIP1-1) mRNA, complete cds
          Length = 1115

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 274 acttggtcttgaatgggatcgctctgatgaccacctggtggta 316
           |||||| |||||| || || |||||||||||||||||||||||
Sbjct: 887 acttggacttgaagggaatggctctgatgaccacctggtggta 845
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>emb|AJ314584.1|POC314584 Posidonia oceanica mRNA for putative plasma membrane intrinsic
           protein (pip1a gene)
          Length = 1139

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 278 ggtcttgaatgggatcgctctgatgaccacctggtggtagat 319
           |||||||||||| || ||||||||||| | ||||||||||||
Sbjct: 874 ggtcttgaatggaattgctctgatgactatctggtggtagat 833
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>emb|AJ271796.1|ZMA271796 Zea mays mRNA for plasma membrane intrinsic protein (pip4 gene)
          Length = 1364

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 311 gtggtagatggcggccagcgcggcgccgatgaaggggccgaccca 355
           ||||||||||||||| || || || |||||||||||||| |||||
Sbjct: 906 gtggtagatggcggcaagagcagcaccgatgaaggggccaaccca 862
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>gb|AF326489.1|AF326489 Zea mays plasma membrane integral protein ZmPIP1-5 mRNA, complete
           cds
          Length = 1338

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 311 gtggtagatggcggccagcgcggcgccgatgaaggggccgaccca 355
           ||||||||||||||| || || || |||||||||||||| |||||
Sbjct: 897 gtggtagatggcggcaagagcagcaccgatgaaggggccaaccca 853
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>gb|AY107675.1| Zea mays PCO112712 mRNA sequence
          Length = 791

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 311 gtggtagatggcggccagcgcggcgccgatgaaggggccgaccca 355
           ||||||||||||||| || || || |||||||||||||| |||||
Sbjct: 330 gtggtagatggcggcaagagcagcaccgatgaaggggccaaccca 286
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>gb|AY547266.2| Ipomoea nil aquaporin-like protein (AQP1) mRNA, complete cds
          Length = 1189

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 281 cttgaatgggatcgctctgatgaccacctggtggta 316
           |||||||||||| |||||||| || |||||||||||
Sbjct: 937 cttgaatgggatggctctgatcacaacctggtggta 902
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>gb|AF188843.1|AF188843 Vitis vinifera cultivar Pinot Noir plasma membrane aquaporin
           (PIP1a) mRNA, complete cds
          Length = 1129

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 277 tggtcttgaatgggatcgctctgatgaccacctggtggta 316
           |||||||||||||||| |||||||| || | |||||||||
Sbjct: 907 tggtcttgaatgggatggctctgattactatctggtggta 868
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>gb|AY611006.1| Xerophyta humilis isolate HC398 PIP1 aquaporin mRNA, partial cds
          Length = 502

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 282 ttgaatgggatcgctctgatgaccacctggtggta 316
           ||||| ||||| ||||||||||| |||||||||||
Sbjct: 176 ttgaaggggattgctctgatgacgacctggtggta 142
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 317    gatggcggccagcgcggcgccga 339
              |||||||||||||||||||||||
Sbjct: 310343 gatggcggccagcgcggcgccga 310365
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>emb|AJ843992.1| Plantago major partial mRNA for aquaporin 2 (aqp2 gene)
          Length = 1089

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 274 acttggtcttgaatgggatcgctctgatgaccacc 308
           ||||| ||||||||||||| |||||||| ||||||
Sbjct: 847 acttgttcttgaatgggatagctctgatcaccacc 813
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>gb|DQ149581.1| Xerophyta humilis PIP1 aquaporin mRNA, complete cds
          Length = 1262

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 282 ttgaatgggatcgctctgatgaccacctggtggta 316
           ||||| ||||| ||||||||||| |||||||||||
Sbjct: 936 ttgaaggggattgctctgatgacgacctggtggta 902
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>emb|AL772318.6| Mouse DNA sequence from clone RP23-77I17 on chromosome 4, complete
              sequence
          Length = 249534

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 84     tctgtctgggttcaggtgaatacagag 110
              ||||||||||| |||||||||||||||
Sbjct: 225070 tctgtctgggtacaggtgaatacagag 225044
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>emb|X95640.1|BOMIPBTCP B.oleracea mRNA for transmembrane channel protein (mipB)
          Length = 1114

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 64/78 (82%)
 Strand = Plus / Minus

                                                                       
Query: 281 cttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccgat 340
           |||||||||||| ||||||||||| | |  |||||| |  || || ||||| || |||||
Sbjct: 867 cttgaatgggatggctctgatgactatcacgtggtaaagagcagcaagcgcagcaccgat 808

                             
Query: 341 gaaggggccgacccaaaa 358
           ||| || |||||||||||
Sbjct: 807 gaatggtccgacccaaaa 790
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>emb|AL031227.1|DMC66A1 Drosophila melanogaster cosmid 66A1
          Length = 34127

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 301  tgaccacctggtggtagatggc 322
            ||||||||||||||||||||||
Sbjct: 9156 tgaccacctggtggtagatggc 9135



 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 301  tgaccacctggtggtagatggc 322
            ||||||||||||||||||||||
Sbjct: 5054 tgaccacctggtggtagatggc 5033
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>emb|AJ001292.1|CPPIPA2 Craterostigma plantagineum mRNA for major intrinsic protein PIPa2
          Length = 1189

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 321 gcggccagcgcggcgccgatgaaggggccgacccaaaa 358
           ||||| ||||| ||||||||||| || |||||||||||
Sbjct: 880 gcggcgagcgctgcgccgatgaatggtccgacccaaaa 843
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>gb|AC023747.4| Drosophila melanogaster X BAC RP98-38L1 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 167097

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 301   tgaccacctggtggtagatggc 322
             ||||||||||||||||||||||
Sbjct: 34675 tgaccacctggtggtagatggc 34654
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>ref|NM_131946.3| Drosophila melanogaster CG12184-RA (CG12184), mRNA
          Length = 3292

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 301  tgaccacctggtggtagatggc 322
            ||||||||||||||||||||||
Sbjct: 2313 tgaccacctggtggtagatggc 2292
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>gb|AY051507.1| Drosophila melanogaster GH15731 full length cDNA
          Length = 2897

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 301  tgaccacctggtggtagatggc 322
            ||||||||||||||||||||||
Sbjct: 1897 tgaccacctggtggtagatggc 1876
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>emb|AJ699398.2| Chenopodium rubrum mRNA for aquaporin PIP1 (PIP1 gene)
          Length = 1163

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 275 cttggtcttgaatgggatcgctctgatgaccacctggtggta 316
           ||||| |||||||||||| |||||||| || | |||||||||
Sbjct: 969 cttggacttgaatgggatggctctgataacaatctggtggta 928
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>gb|AE003431.5| Drosophila melanogaster chromosome X, section 15 of 74 of the complete
              sequence
          Length = 310993

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 301    tgaccacctggtggtagatggc 322
              ||||||||||||||||||||||
Sbjct: 239024 tgaccacctggtggtagatggc 239045
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>gb|AC153823.5| Mus musculus 10 BAC RP23-11M21 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 210101

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 127   acatcaaacttggaagacaaa 147
             |||||||||||||||||||||
Sbjct: 24157 acatcaaacttggaagacaaa 24177
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>gb|AC153943.3| Mus musculus 10 BAC RP24-408O23 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 171960

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 127    acatcaaacttggaagacaaa 147
              |||||||||||||||||||||
Sbjct: 121183 acatcaaacttggaagacaaa 121203
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>dbj|AB002149.1| Nicotiana excelsior mRNA for water channel protein, complete cds
          Length = 1064

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 276 ttggtcttgaatgggatcgctctgatgaccacctggtggta 316
           |||||||||||||| || ||||||||||  | |||||||||
Sbjct: 890 ttggtcttgaatggaatggctctgatgattatctggtggta 850
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 315     tagatggcggccagcgcggcgccgatga 342
               ||||| ||||||||| ||||||||||||
Sbjct: 3446908 tagatcgcggccagcccggcgccgatga 3446881
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>ref|NM_130159.2| Arabidopsis thaliana PIP1B; water channel AT2G45960 (PIP1B) mRNA,
           complete cds
          Length = 1259

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 988 cttgaatgggatggctctgatgac 965
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>ref|XM_550604.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1086

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 332 ggcgccgatgaaggggccga 351
           ||||||||||||||||||||
Sbjct: 987 ggcgccgatgaaggggccga 968
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>ref|XM_521983.1| PREDICTED: Pan troglodytes similar to expressed sequence AI841794
           (LOC466584), mRNA
          Length = 1269

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 15  tgctggatttgcacaacaac 34
           ||||||||||||||||||||
Sbjct: 407 tgctggatttgcacaacaac 426
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>ref|NM_001005210.1| Homo sapiens leucine rich repeat containing 55 (LRRC55), mRNA
          Length = 3797

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 15  tgctggatttgcacaacaac 34
           ||||||||||||||||||||
Sbjct: 554 tgctggatttgcacaacaac 573
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>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence
          Length = 136866

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 332   ggcgccgatgaaggggccga 351
             ||||||||||||||||||||
Sbjct: 82946 ggcgccgatgaaggggccga 82927
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>gb|AF499725.1| Thellungiella halophila plasma membrane intrinsic protein 1B-like
           protein mRNA, complete cds
          Length = 833

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 671 cttgaatgggattgctctgatgac 648
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>gb|AC007528.5| Homo sapiens 12 BAC RP11-473N11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188451

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    cagagcaagagcaagagtag 125
              ||||||||||||||||||||
Sbjct: 155822 cagagcaagagcaagagtag 155841
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>emb|AL117377.18|HSJ1037B9 Human DNA sequence from clone RP5-1037B9 on chromosome 20p12.1-13
             Contains STSs, GSSs and a putative CpG island, complete
             sequence
          Length = 82183

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   cacatcaaacttggaagaca 145
             ||||||||||||||||||||
Sbjct: 72891 cacatcaaacttggaagaca 72872
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>emb|Z17424.1|ATORFA Arabidopsis thaliana mRNA for PIP1b protein
          Length = 1064

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 908 cttgaatgggatggctctgatgac 885
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>emb|X95639.1|BOMIPATCP B.oleracea mRNA for transmembrane channel protein (mipA)
          Length = 1104

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 886 cttgaatgggatggctctgatgac 863
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>gb|AY091254.1| Arabidopsis thaliana putative aquaporin protein (At2g45960) mRNA,
           complete cds
          Length = 892

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 849 cttgaatgggatggctctgatgac 826
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>emb|X68293.1|ATRNATPR A.thaliana mRNA for transmembrane protein A
          Length = 1105

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 903 cttgaatgggatggctctgatgac 880
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>gb|AY063931.1| Arabidopsis thaliana putative aquaporin, plasma membrane intrinsic
           protein 1B (At2g45960) mRNA, complete cds
          Length = 1077

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 909 cttgaatgggatggctctgatgac 886
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 317    gatggcggccagcgcggcgc 336
              ||||||||||||||||||||
Sbjct: 539763 gatggcggccagcgcggcgc 539782
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>emb|AJ849322.1| Populus tremula x Populus tremuloides mRNA for putative plasma
           membrane intrinsic protein (pip1.2 gene)
          Length = 1124

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 339
           ||||||| || || ||||||||||| | |||||||||||  ||||| || || || || |
Sbjct: 931 tcttgaaaggaatggctctgatgactatctggtggtagacagcggcaagagcagctccaa 872

                           
Query: 340 tgaaggggccgaccca 355
           |||| ||||| |||||
Sbjct: 871 tgaaagggccaaccca 856
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 317     gatggcggccagcgcggcgccgat 340
               |||||| |||||||||||||||||
Sbjct: 1468545 gatggccgccagcgcggcgccgat 1468568
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>gb|AC182472.3| Pan troglodytes BAC clone CH251-394C9 from chromosome 19, complete
              sequence
          Length = 165954

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 247    catctttctttgtagcagcagctt 270
              |||||||| |||||||||||||||
Sbjct: 108793 catctttcattgtagcagcagctt 108770
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>dbj|AK127591.1| Homo sapiens cDNA FLJ45686 fis, clone FCBBF3012443
          Length = 3797

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 15  tgctggatttgcacaacaac 34
           ||||||||||||||||||||
Sbjct: 554 tgctggatttgcacaacaac 573
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 319     tggcggccagcgcggcgccg 338
               ||||||||||||||||||||
Sbjct: 4507898 tggcggccagcgcggcgccg 4507879
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>gb|AC004665.3| Arabidopsis thaliana chromosome 2 clone F4I18 map CIC02E07, complete
             sequence
          Length = 101647

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 281   cttgaatgggatcgctctgatgac 304
             |||||||||||| |||||||||||
Sbjct: 15226 cttgaatgggatggctctgatgac 15249
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>gb|AC016493.14| Homo sapiens chromosome 18, clone RP11-58G13, complete sequence
          Length = 163936

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    ttggaagacaaattggaatt 155
              ||||||||||||||||||||
Sbjct: 159892 ttggaagacaaattggaatt 159873
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>gb|AF141898.1|AF141898 Vitis berlandieri x Vitis rupestris putative aquaporin PIP1-2
           (PIP1-2) mRNA, complete cds
          Length = 1154

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 281 cttgaatgggatcgctctgatgaccacctggtggta 316
           |||||||||||| |||||||| || | |||||||||
Sbjct: 911 cttgaatgggatggctctgattactatctggtggta 876
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>gb|AC023577.6| Homo sapiens chromosome 18, clone RP11-645D5, complete sequence
          Length = 166503

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   ttggaagacaaattggaatt 155
             ||||||||||||||||||||
Sbjct: 50150 ttggaagacaaattggaatt 50131
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>dbj|AK222086.1| Arabidopsis thaliana mRNA for aquaporin, partial cds, clone:
           RAFL22-84-C08
          Length = 318

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 111 cttgaatgggatggctctgatgac 88
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>gb|AY049238.1| Arabidopsis thaliana clone RAFL08-10-H13(R13205), mRNA sequence
          Length = 1913

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 909 cttgaatgggatggctctgatgac 886
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>gb|AF299051.1|AF299051 Brassica oleracea aquaporin PIP1b2 mRNA, complete cds
          Length = 1101

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 868 cttgaatgggatggctctgatgac 845
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>gb|AF299050.1|AF299050 Brassica oleracea aquaporin PIP1b1 mRNA, complete cds
          Length = 1084

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 885 cttgaatgggatggctctgatgac 862
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 332     ggcgccgatgaaggggccga 351
               ||||||||||||||||||||
Sbjct: 1762730 ggcgccgatgaaggggccga 1762711
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>emb|BX820173.1|CNS0A8G3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS86ZH06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1084

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 889 cttgaatgggatggctctgatgac 866
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>emb|BX819664.1|CNS0A8JV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS13ZG09 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 679

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 522 cttgaatgggatggctctgatgac 499
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>emb|BX820969.1|CNS0A7WJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH87ZA07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1036

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 894 cttgaatgggatggctctgatgac 871
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>emb|BX819791.1|CNS0A7WA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS2ZA01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1060

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 881 cttgaatgggatggctctgatgac 858
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>gb|AC011500.7| Homo sapiens chromosome 19 clone CTB-60E11, complete sequence
          Length = 200430

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 247    catctttctttgtagcagcagctt 270
              |||||||| |||||||||||||||
Sbjct: 139931 catctttcattgtagcagcagctt 139908
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>gb|AY957387.1| Pseudomonas stutzeri DnrE (dnrE) gene, complete cds; NarL-like (narL)
            and NarX-like (narX) genes, complete sequence; NarK
            (narK), NarM (narM), NarG (narG), NarH (narH), NarJ
            (narJ), and NarI (narI) genes, complete cds; and unknown
            gene
          Length = 15150

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 332  ggcgccgatgaaggggccga 351
            ||||||||||||||||||||
Sbjct: 5753 ggcgccgatgaaggggccga 5734
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>gb|AY048294.1| Arabidopsis thaliana At2g45960/F4I18.6 mRNA, complete cds
          Length = 1052

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 909 cttgaatgggatggctctgatgac 886
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>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0679C08
          Length = 156266

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 332   ggcgccgatgaaggggccga 351
             ||||||||||||||||||||
Sbjct: 87879 ggcgccgatgaaggggccga 87860
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>gb|AF139814.1|AF139814 Triticum aestivum plasma membrane intrinsic protein 1 (PIP1) mRNA,
           complete cds
          Length = 1283

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 308 ctggtggtagatggcggccagcgcggcgccgatgaaggggccgaccca 355
           ||||||||||| ||| || | ||| |||||||| | ||||||||||||
Sbjct: 890 ctggtggtagaaggccgcgatcgccgcgccgatcatggggccgaccca 843
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>emb|AJ243257.1|SNA243257 Streptomyces natalensis plasmid pSNA1 including spda, kora, spdb2 and
            rep genes
          Length = 9367

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 319  tggcggccagcgcggcgccg 338
            ||||||||||||||||||||
Sbjct: 4015 tggcggccagcgcggcgccg 3996
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>emb|Z17399.1|ATORFB Arabidopsis thaliana PIP1b gene
          Length = 2773

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 281  cttgaatgggatcgctctgatgac 304
            |||||||||||| |||||||||||
Sbjct: 1547 cttgaatgggatggctctgatgac 1524
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>dbj|AP001786.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-176J24, complete
             sequences
          Length = 171744

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    tgctggatttgcacaacaac 34
             ||||||||||||||||||||
Sbjct: 92890 tgctggatttgcacaacaac 92909
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>gb|DQ151348.1| Petromyzon marinus clone T.D8 variable lymphocyte receptor
           diversity region (VLR) mRNA, partial cds
          Length = 534

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 15  tgctggatttgcacaacaac 34
           ||||||||||||||||||||
Sbjct: 263 tgctggatttgcacaacaac 282
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>gb|AF004293.1|AF004293 Brassica rapa aquaporin (MOD) mRNA, complete cds
          Length = 900

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 867 cttgaatgggatggctctgatgac 844
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>dbj|AB030695.1| Raphanus sativus PAQ1b mRNA for plasma membrane aquaporin 1b,
           complete cds
          Length = 1053

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 870 cttgaatgggatggctctgatgac 847


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,715,120
Number of Sequences: 3902068
Number of extensions: 3715120
Number of successful extensions: 72797
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72332
Number of HSP's gapped (non-prelim): 464
length of query: 359
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 337
effective length of database: 17,147,199,772
effective search space: 5778606323164
effective search space used: 5778606323164
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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