>ATM_NEUCR (Q7RZT9) Serine/threonine-protein kinase tel-1 (EC 2.7.11.1)|
           (DNA-damage checkpoint kinase tel-1) (Telomere length
           regulation protein 1) (ATM homolog)
          Length = 2953

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +3

Query: 231 AMHRSTRLIRSETITYCML-EEYCSGEDDRRRLFLDSPQRWKLESPSARSSHSGK 392
           A  R+ +  R   + Y +L E+    ED  +    D P+R ++ +  + SSHS K
Sbjct: 671 AQFRAVQKQRHAMLRYLLLLEDEAPPEDSHKATSTDQPKREEIRAADSSSSHSAK 725

>BEDC2_PSEPU (Q07945) Benzene 1,2-dioxygenase beta subunit (EC 1.14.12.3)|
          Length = 187

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
 Frame = +3

Query: 240 RSTRLIRSETITYCMLEEYCSGEDDR-----RRLFLDSPQRWKLESPSARSSH 383
           R+TR++R   + Y  L +Y   +DD      R   + S   W  E+P++R+ H
Sbjct: 60  RTTRIMRDSRLEYSGLRDYAHFDDDATMMKGRLRKITSDVSWS-ENPASRTRH 111

>PHR_BUCAI (P57386) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA|
           photolyase) (Photoreactivating enzyme)
          Length = 483

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 88  LHPPHEKSAERRF*LDFPN 144
           +H PHE S ++ F +D+PN
Sbjct: 434 IHQPHEWSKQKNFKIDYPN 452


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,094,759
Number of Sequences: 219361
Number of extensions: 1000524
Number of successful extensions: 2317
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2317
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)