>gb|AC122208.4| Mus musculus BAC clone RP23-95H7 from chromosome 13, complete sequence
          Length = 155854

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 55    gcaacaccaaccaatgcacag 75
             |||||||||||||||||||||
Sbjct: 17672 gcaacaccaaccaatgcacag 17692

>gb|AF195527.1|AF195527 Bos taurus IP3 receptor associated cGMP kinase substrate B (IRAGb)
            mRNA, complete cds
          Length = 6048

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 72   acagcaaaacaaatgcaacgacaccacca 100
            ||||||||||||| |||| ||||||||||
Sbjct: 4130 acagcaaaacaaaagcaaagacaccacca 4102

>gb|AF195526.1|AF195526 Bos taurus IP3 receptor associated cGMP kinase substrate A (IRAGa)
            mRNA, complete cds
          Length = 6338

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 72   acagcaaaacaaatgcaacgacaccacca 100
            ||||||||||||| |||| ||||||||||
Sbjct: 4420 acagcaaaacaaaagcaaagacaccacca 4392

>ref|NM_174392.1| Bos taurus murine retrovirus integration site 1 homolog (MRVI1),
            transcript variant 1, mRNA
          Length = 6338

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 72   acagcaaaacaaatgcaacgacaccacca 100
            ||||||||||||| |||| ||||||||||
Sbjct: 4420 acagcaaaacaaaagcaaagacaccacca 4392

>ref|NM_194465.1| Bos taurus murine retrovirus integration site 1 homolog (MRVI1),
            transcript variant 2, mRNA
          Length = 6048

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 72   acagcaaaacaaatgcaacgacaccacca 100
            ||||||||||||| |||| ||||||||||
Sbjct: 4130 acagcaaaacaaaagcaaagacaccacca 4102

>emb|CT025597.13| Mouse DNA sequence from clone RP23-265N2 on chromosome 13, complete
             sequence
          Length = 230327

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 55    gcaacaccaaccaatgcacag 75
             |||||||||||||||||||||
Sbjct: 92136 gcaacaccaaccaatgcacag 92156

>gb|AC102457.11| Mus musculus chromosome 19, clone RP24-312C18, complete sequence
          Length = 147128

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   caaaccacaggaccaggaac 211
             ||||||||||||||||||||
Sbjct: 66599 caaaccacaggaccaggaac 66580

>gb|AC168149.7| Medicago truncatula clone mth2-84g4, complete sequence
          Length = 122726

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 93     caccaccaaaaaccaccaca 112
              ||||||||||||||||||||
Sbjct: 113256 caccaccaaaaaccaccaca 113275

>gb|AY687729.1| HIV-1 isolate E060BB from USA envelope glycoprotein (env) gene,
           partial cds
          Length = 586

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 86  gcaacgacaccaccaaaaac 105
           ||||||||||||||||||||
Sbjct: 510 gcaacgacaccaccaaaaac 529

>emb|CT025837.1| Medicago truncatula chromosome 5 clone mth2-28f11, COMPLETE SEQUENCE
          Length = 99258

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    caccaccaaaaaccaccaca 112
             ||||||||||||||||||||
Sbjct: 65987 caccaccaaaaaccaccaca 65968

>gb|AC133182.3| Mus musculus BAC clone RP24-181H19 from chromosome 18, complete
             sequence
          Length = 163378

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    caccaccaaaaaccaccaca 112
             ||||||||||||||||||||
Sbjct: 40283 caccaccaaaaaccaccaca 40302

>gb|AC098735.4| Mus musculus BAC clone RP23-121P5 from 16, complete sequence
          Length = 189844

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    gagatacttgttcacacaaa 41
             ||||||||||||||||||||
Sbjct: 46883 gagatacttgttcacacaaa 46864

>gb|AC146748.16| Medicago truncatula clone mth2-65k8, complete sequence
          Length = 113744

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    caccaccaaaaaccaccaca 112
             ||||||||||||||||||||
Sbjct: 45762 caccaccaaaaaccaccaca 45781

>emb|AL035425.13|HS24A23 Human DNA sequence from clone RP6-24A23 on chromosome Xq22.2-23
             Contains the 3' end of the COL4A5 gene for type IV alpha 5
             collagen (Alport syndrome), the IRS4 gene for insulin
             receptor substrate 4, a novel gene and a CpG island,
             complete sequence
          Length = 137100

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    caccaccaaaaaccaccaca 112
             ||||||||||||||||||||
Sbjct: 90566 caccaccaaaaaccaccaca 90547

>emb|CR931811.1| Medicago truncatula chromosome 5 clone mte1-56a16, COMPLETE SEQUENCE
          Length = 88536

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    caccaccaaaaaccaccaca 112
             ||||||||||||||||||||
Sbjct: 86445 caccaccaaaaaccaccaca 86464

>gb|AC160132.2| Mus musculus BAC clone RP23-197I12 from chromosome 9, complete sequence
          Length = 202786

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    acaccaaccaatgcacagca 77
             ||||||||||||||||||||
Sbjct: 92567 acaccaaccaatgcacagca 92548

>gb|AC149127.6| Medicago truncatula clone mth2-108o17, complete sequence
          Length = 92727

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    caccaccaaaaaccaccaca 112
             ||||||||||||||||||||
Sbjct: 45195 caccaccaaaaaccaccaca 45176

>gb|AC010665.6| Drosophila melanogaster 3L BAC RP98-23H9 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 156526

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    atgcacagcaaaacaaatgc 87
             ||||||||||||||||||||
Sbjct: 68425 atgcacagcaaaacaaatgc 68444

>gb|AC157586.2| Mus musculus BAC clone RP24-406D13 from chromosome 9, complete sequence
          Length = 218664

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     acaccaaccaatgcacagca 77
              ||||||||||||||||||||
Sbjct: 178794 acaccaaccaatgcacagca 178775

>gb|AC154770.2| Mus musculus BAC clone RP24-448C20 from chromosome 16, complete sequence
          Length = 196851

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     gagatacttgttcacacaaa 41
              ||||||||||||||||||||
Sbjct: 143196 gagatacttgttcacacaaa 143177

>gb|AE003482.4| Drosophila melanogaster chromosome 3L, section 16 of 83 of the complete
             sequence
          Length = 302417

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    atgcacagcaaaacaaatgc 87
             ||||||||||||||||||||
Sbjct: 15279 atgcacagcaaaacaaatgc 15298

>gb|AC111031.8| Mus musculus chromosome 18, clone RP23-447L21, complete sequence
          Length = 177570

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    caccaccaaaaaccaccaca 112
             ||||||||||||||||||||
Sbjct: 63245 caccaccaaaaaccaccaca 63226


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,848,337
Number of Sequences: 3902068
Number of extensions: 1848337
Number of successful extensions: 138154
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 138093
Number of HSP's gapped (non-prelim): 61
length of query: 223
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 201
effective length of database: 17,147,199,772
effective search space: 3446587154172
effective search space used: 3446587154172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)