ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet17c06 |
|---|---|
| Clone Library Name | barley_pub |
>ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger protein ISAP1| (Stress-associated protein 1) (OsISAP1) Length = 164 Score = 105 bits (263), Expect = 2e-23 Identities = 47/47 (100%), Positives = 47/47 (100%) Frame = -1 Query: 392 RCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVRF 252 RCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVRF Sbjct: 118 RCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVRF 164
>Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 68.2 bits (165), Expect = 5e-12 Identities = 29/45 (64%), Positives = 34/45 (75%) Frame = -1 Query: 389 CRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVR 255 CRCG+LFCG HRYSD+H C YDYK+ A I ++NPVV A KI R Sbjct: 168 CRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQR 212
>Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 68.2 bits (165), Expect = 5e-12 Identities = 29/45 (64%), Positives = 34/45 (75%) Frame = -1 Query: 389 CRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVR 255 CRCG+LFCG HRYSD+H C YDYK+ A I ++NPVV A KI R Sbjct: 168 CRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQR 212
>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein| At4g12040 Length = 175 Score = 67.0 bits (162), Expect = 1e-11 Identities = 25/46 (54%), Positives = 35/46 (76%) Frame = -1 Query: 392 RCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVR 255 +C+CG FCG HRY ++H CS+D+K RDAIA+ NP+V+A K+ R Sbjct: 129 KCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQR 174
>ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing protein| At1g12440 Length = 168 Score = 65.9 bits (159), Expect = 2e-11 Identities = 26/46 (56%), Positives = 34/46 (73%) Frame = -1 Query: 392 RCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVR 255 +CRCG FCG HRY + H C +D+K AR+AIA+ NPVV+A K+ R Sbjct: 122 KCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVDR 167
>ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing protein| At2g36320 Length = 161 Score = 65.5 bits (158), Expect = 3e-11 Identities = 26/43 (60%), Positives = 34/43 (79%) Frame = -1 Query: 389 CRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKI 261 CRCG FCG HRY + HGC++D+KSA R+ IA+ NP+V AAK+ Sbjct: 116 CRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKL 158
>ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog| Length = 226 Score = 38.5 bits (88), Expect = 0.004 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = -1 Query: 389 CRCGHLFCGEHRYSDRHGCSYDYKSAARD 303 CRCG++FC HR ++H C++D+ R+ Sbjct: 173 CRCGYVFCMLHRLPEQHDCTFDHMGRGRE 201
>ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 38.5 bits (88), Expect = 0.004 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = -1 Query: 389 CRCGHLFCGEHRYSDRHGCSYDYKSAARD 303 CRCG++FC HR ++H C++D+ R+ Sbjct: 174 CRCGYVFCMLHRLPEQHDCTFDHMGRGRE 202
>ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 38.5 bits (88), Expect = 0.004 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = -1 Query: 389 CRCGHLFCGEHRYSDRHGCSYDYKSAARD 303 CRCG++FC HR ++H C++D+ R+ Sbjct: 174 CRCGYVFCMLHRLPEQHDCTFDHMGRGRE 202
>ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 38.5 bits (88), Expect = 0.004 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = -1 Query: 389 CRCGHLFCGEHRYSDRHGCSYDYKSAARD 303 CRCG++FC HR ++H C++D+ R+ Sbjct: 174 CRCGYVFCMLHRLPEQHDCTFDHMGRGRE 202
>DHRS7_HUMAN (Q9Y394) Dehydrogenase/reductase SDR family member 7 precursor (EC| 1.1.-.-) (Retinal short-chain dehydrogenase/reductase 4) (retSDR4) Length = 339 Score = 33.1 bits (74), Expect = 0.16 Identities = 16/33 (48%), Positives = 23/33 (69%) Frame = -1 Query: 194 NWELKVWMLLLCCSLLAIVFPFLFFLIANGRIS 96 NWEL +W+L+LC LL +V L FL A+G ++ Sbjct: 2 NWELLLWLLVLCALLLLLV-QLLRFLRADGDLT 33
>ZFAN1_MOUSE (Q8BFR6) AN1-type zinc finger protein 1| Length = 268 Score = 30.8 bits (68), Expect = 0.82 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = -1 Query: 383 CGHLFCGEHRYSDRHGCS 330 C +FC EHR D HGCS Sbjct: 28 CSGIFCLEHRSKDSHGCS 45
>GERXB_BACAN (Q9ZFB5) Spore germination protein XB| Length = 355 Score = 28.5 bits (62), Expect = 4.1 Identities = 10/36 (27%), Positives = 21/36 (58%) Frame = +2 Query: 20 NPFVLRFFFPQPPHITIIVTLFLFHHLSSRLQLKRI 127 +P + +P + +I LFL HH+ S+++L ++ Sbjct: 175 DPVIKGMIYPAAGFVELIFILFLQHHIGSKIKLSQL 210
>SC6A8_RAT (P28570) Sodium- and chloride-dependent creatine transporter 1| (CT1) (Creatine transporter 1) (CHOT1) (Solute carrier family 6 member 8) Length = 635 Score = 28.5 bits (62), Expect = 4.1 Identities = 25/80 (31%), Positives = 38/80 (47%) Frame = -1 Query: 326 DYKSAARDAIARDNPVVRAAKIVRF*EANKIKKKSTVLARNGEKNWELKVWMLLLCCSLL 147 D +A+ + D R + ++ F E NK+ + ST L G NWE V + LL C +L Sbjct: 189 DCANASLANLTCDQLADRRSPVIEFWE-NKVLRLSTGLEVPGALNWE--VTLCLLACWVL 245 Query: 146 AIVFPFLFFLIANGRISGGK 87 ++F + G S GK Sbjct: 246 ------VYFCVWKGVKSTGK 259
>SC6A8_MOUSE (Q8VBW1) Sodium- and chloride-dependent creatine transporter 1| (CT1) (Creatine transporter 1) (Solute carrier family 6 member 8) Length = 640 Score = 28.5 bits (62), Expect = 4.1 Identities = 25/80 (31%), Positives = 38/80 (47%) Frame = -1 Query: 326 DYKSAARDAIARDNPVVRAAKIVRF*EANKIKKKSTVLARNGEKNWELKVWMLLLCCSLL 147 D +A+ + D R + ++ F E NK+ + ST L G NWE V + LL C +L Sbjct: 189 DCANASLANLTCDQLADRRSPVIEFWE-NKVLRLSTGLEVPGALNWE--VTLCLLACWVL 245 Query: 146 AIVFPFLFFLIANGRISGGK 87 ++F + G S GK Sbjct: 246 ------VYFCVWKGVKSTGK 259
>ZFN2B_RAT (Q4KLG9) AN1-type zinc finger protein 2B| Length = 257 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -1 Query: 386 RCGHLFCGEHRYSDRHGCSYDYKSAARDAIA 294 RCG FC +HR+ H CS + +R +A Sbjct: 117 RCGRNFCIKHRHPLDHDCSGEGHPTSRAGLA 147
>ZFN2B_MOUSE (Q91X58) AN1-type zinc finger protein 2B| Length = 257 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -1 Query: 386 RCGHLFCGEHRYSDRHGCSYDYKSAARDAIA 294 RCG FC +HR+ H CS + +R +A Sbjct: 117 RCGRNFCIKHRHPLDHECSGEGHQTSRAGLA 147
>Y1895_NEIMA (P67216) UPF0090 protein NMA1895| Length = 149 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 326 DYKSAARDAIARDNPVVRAAKIVRF*EANKIKKKSTVLARNGEKNWELKV 177 DYK+ + D P+ +AA VRF A + K T L +G+KN+ K+ Sbjct: 67 DYKNLEISSPGLDRPLKKAADFVRF--AGQNAKIKTRLPIDGQKNFIGKI 114
>Y1641_NEIMB (P67217) UPF0090 protein NMB1641| Length = 149 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 326 DYKSAARDAIARDNPVVRAAKIVRF*EANKIKKKSTVLARNGEKNWELKV 177 DYK+ + D P+ +AA VRF A + K T L +G+KN+ K+ Sbjct: 67 DYKNLEISSPGLDRPLKKAADFVRF--AGQNAKIKTRLPIDGQKNFIGKI 114
>NOV_HUMAN (P48745) Protein NOV homolog precursor (NovH) (Nephroblastoma| overexpressed gene protein homolog) Length = 357 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +2 Query: 272 RAPPGCPWRWRPSPPTC 322 R PP CP R +PPTC Sbjct: 34 RCPPQCPGRCPATPPTC 50
>ADK_CRIGR (P55262) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine| 5'-phosphotransferase) Length = 361 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 6/54 (11%) Frame = +1 Query: 142 IARREQHNNNIHTFN------SQFFSPFLAKTVDFFLILFASQNLTILAARTTG 285 +AR NN I T N SQFF L + + + ILF ++ AR G Sbjct: 198 VARYAAENNRIFTLNLSAPFISQFFKESLMEVMPYVDILFGNETEAATFAREQG 251
>UL108_HCMVA (P16829) Hypothetical protein UL108| Length = 123 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = -3 Query: 162 MLFSSRNCFSLFILFNCKREDKWWKRNSVTIMVM 61 +L SSR+CF F LF+ W +SV ++VM Sbjct: 51 VLLSSRSCFVFFFLFS------RWNFSSVRVLVM 78
>ZFAN1_HUMAN (Q8TCF1) AN1-type zinc finger protein 1| Length = 268 Score = 27.3 bits (59), Expect = 9.0 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -1 Query: 383 CGHLFCGEHRYSDRHGC 333 C +FC EHR + HGC Sbjct: 28 CSGIFCLEHRSRESHGC 44
>NOP12_GIBZE (Q4IQW0) Nucleolar protein 12| Length = 559 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = -3 Query: 312 GEGRHRQGQPGGARGQDR*VLRGKQ 238 GE R +GQP G +G ++ V G++ Sbjct: 495 GESREAEGQPAGIKGPEQFVFEGRR 519
>DHRS7_MOUSE (Q9CXR1) Dehydrogenase/reductase SDR family member 7 precursor (EC| 1.1.-.-) (Retinal short-chain dehydrogenase/reductase 4) Length = 338 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -1 Query: 194 NWELKVWMLLLCCSLLAIVFPFLFFLIANGRIS 96 +WEL +W+L LC +L +V L FL A+ ++ Sbjct: 2 SWELLLWLLALCALILPLV-QLLRFLRADADLT 33
>ADK_HUMAN (P55263) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine| 5'-phosphotransferase) Length = 362 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 6/54 (11%) Frame = +1 Query: 142 IARREQHNNNIHTFN------SQFFSPFLAKTVDFFLILFASQNLTILAARTTG 285 +A NN I T N SQF+ L K + + ILF ++ AR G Sbjct: 199 VAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQG 252 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,419,151 Number of Sequences: 219361 Number of extensions: 952233 Number of successful extensions: 2913 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 2815 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2911 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
