ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet17b07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1 204 4e-50
2gb|AC018509.6| Homo sapiens chromosome 10 clone RP11-307B23, com... 46 0.021
3gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.084
4gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete se... 44 0.084
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.084
6gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome... 44 0.084
7gb|AC122011.3| Mus musculus chromosome 10 clone RP24-352E6, comp... 40 1.3
8gb|AC146316.3| Microcebus murinus clone CH257-437M14, complete s... 40 1.3
9gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, comp... 40 1.3
10ref|XM_598627.2| PREDICTED: Bos taurus similar to CG6454-PB, iso... 40 1.3
11gb|AC141846.3| Homo sapiens chromosome 16 clone CTB-55P19, compl... 40 1.3
12gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome... 40 1.3
13gb|AC100120.9| Mus musculus chromosome 10, clone RP23-40I1, comp... 40 1.3
14gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, com... 40 1.3
15gb|AC137836.25| Medicago truncatula clone mth2-10f14, complete s... 40 1.3
16emb|AL590225.4| Human DNA sequence from clone RP11-358H7 on chro... 40 1.3
17emb|AL161440.9| Human DNA sequence from clone RP1-210G8 on chrom... 40 1.3
18gb|AC161185.5| Mus musculus chromosome 5, clone RP23-297D16, com... 40 1.3
19emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 40 1.3
20gb|AC158753.8| Mus musculus chromosome 5, clone RP23-301E24, com... 40 1.3
21gb|AC068304.33| Homo sapiens 12 BAC RP11-515A6 (Roswell Park Can... 40 1.3
22gb|AC092721.2| Homo sapiens chromosome 16 clone RP11-514P19, com... 40 1.3
23gb|AC140831.3| Homo sapiens chromosome 16 clone RP11-907K12, com... 40 1.3
24gb|AC092374.4| Homo sapiens chromosome 16 clone RP11-637I8, comp... 40 1.3
25dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 40 1.3
26gb|AC007446.8|AC007446 Homo sapiens, clone hRPK.67_A_1, complete... 40 1.3
27gb|DP000022.1| Microcebus murinus target 1 genomic scaffold 40 1.3
28gb|AC152494.1| Zea mays BAC clone Z418K17, complete sequence 38 5.2
29ref|XM_628995.1| Dictyostelium discoideum hypothetical protein (... 38 5.2
30gb|DP000017.1| Sus scrofa target 1 genomic scaffold 38 5.2
31gb|AC133880.7| Mus musculus chromosome 15, clone RP24-142B13, co... 38 5.2
32gb|AC159310.3| Mus musculus BAC clone RP23-158N20 from chromosom... 38 5.2
33gb|AY136628.2| Petunia integrifolia subsp. inflata S2 self-incom... 38 5.2
34gb|AC092497.2| Sus scrofa clone RP44-30C22, complete sequence 38 5.2
35gb|AC135239.3| Mus musculus BAC clone RP23-324D2 from chromosome... 38 5.2
36gb|AC132581.4| Mus musculus BAC clone RP24-390D8 from chromosome... 38 5.2
37gb|AC146144.2| Pan troglodytes BAC clone RP43-37J17 from 7, comp... 38 5.2
38gb|AC146041.2| Pan troglodytes BAC clone RP43-98A7 from 7, compl... 38 5.2
39emb|CR956364.13| Pig DNA sequence from clone PigI-52G3 on chromo... 38 5.2
40gb|BC100635.1| Rattus norvegicus transmembrane protein 45b, mRNA... 38 5.2
41gb|AC132227.3| Mus musculus BAC clone RP24-573O22 from chromosom... 38 5.2
42gb|AC144508.3| Mus musculus BAC clone RP24-152C23 from chromosom... 38 5.2
43gb|AC025448.6| Homo sapiens chromosome 5 clone CTD-2113L7, compl... 38 5.2
44gb|AC126032.4| Mus musculus BAC clone RP24-94B12 from chromosome... 38 5.2
45ref|NM_001033067.1| Rattus norvegicus transmembrane protein 45b ... 38 5.2
46gb|AC146378.2| Pan troglodytes BAC clone RP43-93I8 from 7, compl... 38 5.2
47ref|XM_724036.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 38 5.2
48ref|XM_724139.1| Plasmodium yoelii yoelii str. 17XNL mature para... 38 5.2
49gb|AC007384.3| Homo sapiens BAC clone RP11-325F22 from 7, comple... 38 5.2
50gb|AC092099.4| Homo sapiens BAC clone RP11-616A20 from 7, comple... 38 5.2
51ref|XM_675135.1| Plasmodium berghei strain ANKA hypothetical pro... 38 5.2
52gb|AC137831.27| Medicago truncatula clone mth2-34o21, complete s... 38 5.2
53gb|AC127168.17| Medicago truncatula clone mth2-15m13, complete s... 38 5.2
54emb|AL136146.10| Human DNA sequence from clone RP5-916O11 on chr... 38 5.2
55emb|AL035691.17|HS249F5 Human DNA sequence from clone RP1-249F5 ... 38 5.2
56gb|AC157986.4| Mus musculus chromosome 19, clone RP23-160F18, co... 38 5.2
57emb|AL022160.1|HS33F8 Human DNA sequence from clone RP6-33F8 on ... 38 5.2
58gb|AC163212.3| Mus musculus chromosome 3, clone RP24-102O2, comp... 38 5.2
59gb|AY293855.1| Homo sapiens insulin-like growth factor 2 recepto... 38 5.2
60emb|BX664732.7| Mouse DNA sequence from clone RP23-452F17 on chr... 38 5.2
61gb|AC092421.2| Homo sapiens chromosome 3 clone RP11-476A24, comp... 38 5.2
62gb|AC008871.5| Homo sapiens chromosome 5 clone CTD-2197I11, comp... 38 5.2
63gb|AF069333.2|AF069333 Homo sapiens insulin-like growth factor I... 38 5.2
64gb|AF348209.1|AF348209 Homo sapiens IGF2R gene, complete cds 38 5.2
65dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.2
66gb|AC084520.1|CBRG18K16 Caenorhabditis briggsae cosmid G18K16, c... 38 5.2
67emb|BX322651.3| Zebrafish DNA sequence from clone DKEYP-32G10, c... 38 5.2
68gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete... 38 5.2
69dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic D... 38 5.2
70emb|BX005357.10| Zebrafish DNA sequence from clone CH211-120C8, ... 38 5.2
71emb|BX682540.5| Mouse DNA sequence from clone RP23-383O14 on chr... 38 5.2
72dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic D... 38 5.2
73emb|AL954129.11| Zebrafish DNA sequence from clone CH211-200P22 ... 38 5.2
74emb|AL671630.10| Mouse DNA sequence from clone RP23-327E13 on ch... 38 5.2
75gb|AC002430.1|AC002430 Human BAC clone CTB-66D11 from 7q22, comp... 38 5.2
76gb|U58761.2| Caenorhabditis elegans cosmid C01F1, complete sequence 38 5.2
77emb|CR318631.5| Zebrafish DNA sequence from clone DKEY-207D5 in ... 38 5.2
78emb|BX649507.3| Zebrafish DNA sequence from clone CH211-154H20 i... 38 5.2
79emb|BX000347.7| Zebrafish DNA sequence from clone DKEY-66C4 in l... 38 5.2
80emb|Z70308.1|CEF49E11 Caenorhabditis elegans Cosmid F49E11, comp... 38 5.2
81gb|AC106833.10| Mus musculus chromosome 19, clone RP24-503K22, c... 38 5.2
82emb|AL671782.5| Mouse DNA sequence from clone RP23-102I3 on chro... 38 5.2
83gb|AC026911.15| Mus musculus chromosome 1, clone RP23-190F21, co... 38 5.2
84gb|AC090692.9| Homo sapiens chromosome 11, clone RP11-698N11, co... 38 5.2 
>emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1
          Length = 833

 Score =  204 bits (103), Expect = 4e-50
 Identities = 113/115 (98%), Gaps = 1/115 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   catcaaatgaaattgatatgaaaaattaaacacaacttgaaa-cagactcggagttgacc 59
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 806 catcaaatgaaattgatatgaaaaattaaacacaacttgaaatcagactcggagttgacc 747

                                                                  
Query: 60  tcacaagcgcacgaacacatgcataaaattaaaccgacacgctgacaccacgacg 114
           |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 746 tcacaagcgcacgaacacatgcatcaaattaaaccgacacgctgacaccacgacg 692
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>gb|AC018509.6| Homo sapiens chromosome 10 clone RP11-307B23, complete sequence
          Length = 162877

 Score = 46.1 bits (23), Expect = 0.021
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 4      caaatgaaattgatatgaaaaat 26
              |||||||||||||||||||||||
Sbjct: 144794 caaatgaaattgatatgaaaaat 144816
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>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0035I01, complete sequence
          Length = 147813

 Score = 44.1 bits (22), Expect = 0.084
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 9    gaaattgatatgaaaaattaaa 30
            ||||||||||||||||||||||
Sbjct: 3137 gaaattgatatgaaaaattaaa 3158
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>gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete sequence
          Length = 158384

 Score = 44.1 bits (22), Expect = 0.084
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 9     gaaattgatatgaaaaattaaa 30
             ||||||||||||||||||||||
Sbjct: 58531 gaaattgatatgaaaaattaaa 58552
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.084
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 9        gaaattgatatgaaaaattaaa 30
                ||||||||||||||||||||||
Sbjct: 29518635 gaaattgatatgaaaaattaaa 29518656
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>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17,
              complete sequence
          Length = 134631

 Score = 44.1 bits (22), Expect = 0.084
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 9      gaaattgatatgaaaaattaaa 30
              ||||||||||||||||||||||
Sbjct: 102905 gaaattgatatgaaaaattaaa 102926
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>gb|AC122011.3| Mus musculus chromosome 10 clone RP24-352E6, complete sequence
          Length = 181468

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     gaaattgatatgaaaaatta 28
             ||||||||||||||||||||
Sbjct: 13285 gaaattgatatgaaaaatta 13266
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>gb|AC146316.3| Microcebus murinus clone CH257-437M14, complete sequence
          Length = 274705

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    ttgatatgaaaaattaaaca 32
             ||||||||||||||||||||
Sbjct: 59774 ttgatatgaaaaattaaaca 59793
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>gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, complete sequence
          Length = 210751

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 1     catcaaatgaaattgatatgaaaa 24
             |||||| |||||||||||||||||
Sbjct: 57747 catcaattgaaattgatatgaaaa 57770
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>ref|XM_598627.2| PREDICTED: Bos taurus similar to CG6454-PB, isoform B (LOC520387),
            mRNA
          Length = 3625

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 20   gaaaaattaaacacaacttgaaac 43
            |||||||||||||||| |||||||
Sbjct: 3157 gaaaaattaaacacaaattgaaac 3134
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>gb|AC141846.3| Homo sapiens chromosome 16 clone CTB-55P19, complete sequence
          Length = 261450

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 8      tgaaattgatatgaaaaattaaacacaa 35
              ||||| |||| |||||||||||||||||
Sbjct: 232770 tgaaagtgatctgaaaaattaaacacaa 232743
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>gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome 10, complete sequence
          Length = 245623

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 19     tgaaaaattaaacacaacttgaaa 42
              ||||||||||||||||| ||||||
Sbjct: 225998 tgaaaaattaaacacaaattgaaa 226021
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>gb|AC100120.9| Mus musculus chromosome 10, clone RP23-40I1, complete sequence
          Length = 236895

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     gaaattgatatgaaaaatta 28
             ||||||||||||||||||||
Sbjct: 38058 gaaattgatatgaaaaatta 38077
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>gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, complete sequence
          Length = 198281

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      aatgaaattgatatgaaaaa 25
              ||||||||||||||||||||
Sbjct: 195204 aatgaaattgatatgaaaaa 195185
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>gb|AC137836.25| Medicago truncatula clone mth2-10f14, complete sequence
          Length = 140197

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     cacatgcataaaattaaacc 94
              ||||||||||||||||||||
Sbjct: 126342 cacatgcataaaattaaacc 126361
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>emb|AL590225.4| Human DNA sequence from clone RP11-358H7 on chromosome 6 Contains
            part of the gene for a novel protein highly similar to
            FLJ30899, complete sequence
          Length = 65114

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 11   aattgatatgaaaaattaaa 30
            ||||||||||||||||||||
Sbjct: 1289 aattgatatgaaaaattaaa 1270
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>emb|AL161440.9| Human DNA sequence from clone RP1-210G8 on chromosome 6, complete
             sequence
          Length = 81780

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    tgaaaaattaaacacaactt 38
             ||||||||||||||||||||
Sbjct: 54905 tgaaaaattaaacacaactt 54886
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>gb|AC161185.5| Mus musculus chromosome 5, clone RP23-297D16, complete sequence
          Length = 206099

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 1    catcaaatgaaattgatatgaaaa 24
            |||||| |||||||||||||||||
Sbjct: 2381 catcaattgaaattgatatgaaaa 2358
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>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     aaattgatatgaaaaattaa 29
              ||||||||||||||||||||
Sbjct: 281659 aaattgatatgaaaaattaa 281678
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>gb|AC158753.8| Mus musculus chromosome 5, clone RP23-301E24, complete sequence
          Length = 190368

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     aatgaaattgatatgaaaaa 25
             ||||||||||||||||||||
Sbjct: 32566 aatgaaattgatatgaaaaa 32547
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>gb|AC068304.33| Homo sapiens 12 BAC RP11-515A6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 155413

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    tgaaaaattaaacacaactt 38
             ||||||||||||||||||||
Sbjct: 18496 tgaaaaattaaacacaactt 18477
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>gb|AC092721.2| Homo sapiens chromosome 16 clone RP11-514P19, complete sequence
          Length = 201382

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 8      tgaaattgatatgaaaaattaaacacaa 35
              ||||| |||| |||||||||||||||||
Sbjct: 194536 tgaaagtgatctgaaaaattaaacacaa 194509
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>gb|AC140831.3| Homo sapiens chromosome 16 clone RP11-907K12, complete sequence
          Length = 96984

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 8     tgaaattgatatgaaaaattaaacacaa 35
             ||||| |||| |||||||||||||||||
Sbjct: 28681 tgaaagtgatctgaaaaattaaacacaa 28708
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>gb|AC092374.4| Homo sapiens chromosome 16 clone RP11-637I8, complete sequence
          Length = 150962

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 8     tgaaattgatatgaaaaattaaacacaa 35
             ||||| |||| |||||||||||||||||
Sbjct: 92388 tgaaagtgatctgaaaaattaaacacaa 92361
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>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     aaattgatatgaaaaattaa 29
              ||||||||||||||||||||
Sbjct: 282959 aaattgatatgaaaaattaa 282978
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>gb|AC007446.8|AC007446 Homo sapiens, clone hRPK.67_A_1, complete sequence
          Length = 177471

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     tgaaaaattaaacacaactt 38
              ||||||||||||||||||||
Sbjct: 126735 tgaaaaattaaacacaactt 126754
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>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold
          Length = 1595145

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     ttgatatgaaaaattaaaca 32
              ||||||||||||||||||||
Sbjct: 631265 ttgatatgaaaaattaaaca 631284
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>gb|AC152494.1| Zea mays BAC clone Z418K17, complete sequence
          Length = 195448

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 19    tgaaaaattaaacacaacttgaa 41
             ||||| |||||||||||||||||
Sbjct: 65173 tgaaatattaaacacaacttgaa 65195
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>ref|XM_628995.1| Dictyostelium discoideum hypothetical protein (DDB0191996), partial
           mRNA
          Length = 2070

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 7   atgaaattgatatgaaaaattaa 29
           ||||||||||| |||||||||||
Sbjct: 408 atgaaattgatttgaaaaattaa 386
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>gb|DP000017.1| Sus scrofa target 1 genomic scaffold
          Length = 1471440

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 74      acacatgcataaaattaaa 92
               |||||||||||||||||||
Sbjct: 1425539 acacatgcataaaattaaa 1425557
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>gb|AC133880.7| Mus musculus chromosome 15, clone RP24-142B13, complete sequence
          Length = 135091

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 4     caaatgaaattgatatgaaaaat 26
             ||||||||||||| |||||||||
Sbjct: 46158 caaatgaaattgaaatgaaaaat 46136
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>gb|AC159310.3| Mus musculus BAC clone RP23-158N20 from chromosome 6, complete sequence
          Length = 222024

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 21    aaaaattaaacacaacttg 39
             |||||||||||||||||||
Sbjct: 37265 aaaaattaaacacaacttg 37247
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>gb|AY136628.2| Petunia integrifolia subsp. inflata S2 self-incompatibility ribonuclease
              (S2-RNase) and S2-locus F-box protein (SLF2) genes,
              complete cds
          Length = 328473

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 24     aattaaacacaacttgaaa 42
              |||||||||||||||||||
Sbjct: 311501 aattaaacacaacttgaaa 311483



 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 24     aattaaacacaacttgaaa 42
              |||||||||||||||||||
Sbjct: 292749 aattaaacacaacttgaaa 292731
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>gb|AC092497.2| Sus scrofa clone RP44-30C22, complete sequence
          Length = 172144

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 74     acacatgcataaaattaaa 92
              |||||||||||||||||||
Sbjct: 126243 acacatgcataaaattaaa 126261
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>gb|AC135239.3| Mus musculus BAC clone RP23-324D2 from chromosome 3, complete sequence
          Length = 190178

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     caaatgaaattgatatgaa 22
             |||||||||||||||||||
Sbjct: 61458 caaatgaaattgatatgaa 61440
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>gb|AC132581.4| Mus musculus BAC clone RP24-390D8 from chromosome 6, complete sequence
          Length = 172240

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 21    aaaaattaaacacaacttg 39
             |||||||||||||||||||
Sbjct: 78588 aaaaattaaacacaacttg 78606
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>gb|AC146144.2| Pan troglodytes BAC clone RP43-37J17 from 7, complete sequence
          Length = 206029

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 10     aaattgatatgaaaaatta 28
              |||||||||||||||||||
Sbjct: 205501 aaattgatatgaaaaatta 205483
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>gb|AC146041.2| Pan troglodytes BAC clone RP43-98A7 from 7, complete sequence
          Length = 120644

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    aaattgatatgaaaaatta 28
             |||||||||||||||||||
Sbjct: 52722 aaattgatatgaaaaatta 52740
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>emb|CR956364.13| Pig DNA sequence from clone PigI-52G3 on chromosome 7, complete
             sequence
          Length = 105198

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 72    gaacacatgcataaaattaaacc 94
             ||||||| |||||||||||||||
Sbjct: 92281 gaacacaagcataaaattaaacc 92259
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>gb|BC100635.1| Rattus norvegicus transmembrane protein 45b, mRNA (cDNA clone
            MGC:124767 IMAGE:5621332), complete cds
          Length = 3477

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 74   acacatgcataaaattaaa 92
            |||||||||||||||||||
Sbjct: 2477 acacatgcataaaattaaa 2495
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>gb|AC132227.3| Mus musculus BAC clone RP24-573O22 from chromosome 8, complete sequence
          Length = 145732

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 4     caaatgaaattgatatgaaaaat 26
             ||||||||||| |||||||||||
Sbjct: 80360 caaatgaaatttatatgaaaaat 80338
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>gb|AC144508.3| Mus musculus BAC clone RP24-152C23 from chromosome 15, complete
             sequence
          Length = 155524

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 24    aattaaacacaacttgaaa 42
             |||||||||||||||||||
Sbjct: 36865 aattaaacacaacttgaaa 36883
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>gb|AC025448.6| Homo sapiens chromosome 5 clone CTD-2113L7, complete sequence
          Length = 164190

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 9     gaaattgatatgaaaaattaaacacaa 35
             ||||||||||| |||||||||| ||||
Sbjct: 75515 gaaattgatatcaaaaattaaaaacaa 75541
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>gb|AC126032.4| Mus musculus BAC clone RP24-94B12 from chromosome 1, complete sequence
          Length = 207475

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 14    tgatatgaaaaattaaaca 32
             |||||||||||||||||||
Sbjct: 73480 tgatatgaaaaattaaaca 73462
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>ref|NM_001033067.1| Rattus norvegicus transmembrane protein 45b (Tmem45b), mRNA
          Length = 3477

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 74   acacatgcataaaattaaa 92
            |||||||||||||||||||
Sbjct: 2477 acacatgcataaaattaaa 2495
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>gb|AC146378.2| Pan troglodytes BAC clone RP43-93I8 from 7, complete sequence
          Length = 135955

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    aaattgatatgaaaaatta 28
             |||||||||||||||||||
Sbjct: 95749 aaattgatatgaaaaatta 95767
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>ref|XM_724036.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01377)
           partial mRNA
          Length = 1593

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 5   aaatgaaattgatatgaaa 23
           |||||||||||||||||||
Sbjct: 708 aaatgaaattgatatgaaa 726
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>ref|XM_724139.1| Plasmodium yoelii yoelii str. 17XNL mature parasite-infected
            erythrocyte surface antigen (PY01460) partial mRNA
          Length = 3144

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                           
Query: 16   atatgaaaaattaaacacaacttgaaacaga 46
            ||||||||||| ||||| |||||||| ||||
Sbjct: 1997 atatgaaaaatgaaacaaaacttgaagcaga 2027
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>gb|AC007384.3| Homo sapiens BAC clone RP11-325F22 from 7, complete sequence
          Length = 170842

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 10     aaattgatatgaaaaatta 28
              |||||||||||||||||||
Sbjct: 155995 aaattgatatgaaaaatta 156013
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>gb|AC092099.4| Homo sapiens BAC clone RP11-616A20 from 7, complete sequence
          Length = 33234

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    aaattgatatgaaaaatta 28
             |||||||||||||||||||
Sbjct: 14219 aaattgatatgaaaaatta 14237
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>ref|XM_675135.1| Plasmodium berghei strain ANKA hypothetical protein (PB000851.00.0)
           partial mRNA
          Length = 1581

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 5   aaatgaaattgatatgaaa 23
           |||||||||||||||||||
Sbjct: 690 aaatgaaattgatatgaaa 708
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>gb|AC137831.27| Medicago truncatula clone mth2-34o21, complete sequence
          Length = 117693

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 74     acacatgcataaaattaaa 92
              |||||||||||||||||||
Sbjct: 100933 acacatgcataaaattaaa 100915
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>gb|AC127168.17| Medicago truncatula clone mth2-15m13, complete sequence
          Length = 117770

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 10     aaattgatatgaaaaatta 28
              |||||||||||||||||||
Sbjct: 114815 aaattgatatgaaaaatta 114797
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>emb|AL136146.10| Human DNA sequence from clone RP5-916O11 on chromosome 11p12-13,
             complete sequence
          Length = 106073

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 12    attgatatgaaaaattaaacaca 34
             ||||| |||||||||||||||||
Sbjct: 12315 attgaaatgaaaaattaaacaca 12293
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>emb|AL035691.17|HS249F5 Human DNA sequence from clone RP1-249F5 on chromosome 6q26-27 Contains
             a novel gene, the MAS1 oncogene, the 5' end of the IGF2R
             gene for insulin-like growth factor 2 receptor
             (cation-independent mannose-6 phosphate receptor,
             Insulin-like growth factor-2 receptor (mannose-6-phosphate
             receptor, cation-independent)) (MPRI, CD222, CIMPR, M6P-R)
             and two CpG islands, complete sequence
          Length = 129968

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    gaaaaattaaacacaactt 38
             |||||||||||||||||||
Sbjct: 41605 gaaaaattaaacacaactt 41623
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>gb|AC157986.4| Mus musculus chromosome 19, clone RP23-160F18, complete sequence
          Length = 207504

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 73     aacacatgcataaaattaa 91
              |||||||||||||||||||
Sbjct: 188801 aacacatgcataaaattaa 188783
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>emb|AL022160.1|HS33F8 Human DNA sequence from clone RP6-33F8 on chromosome Xq21.1-21.3
             Contains the 5' end of a novel gene (FLJ30678), complete
             sequence
          Length = 134474

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     tcaaatgaaattgatatga 21
             |||||||||||||||||||
Sbjct: 93826 tcaaatgaaattgatatga 93808
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>gb|AC163212.3| Mus musculus chromosome 3, clone RP24-102O2, complete sequence
          Length = 199319

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     caaatgaaattgatatgaa 22
             |||||||||||||||||||
Sbjct: 31898 caaatgaaattgatatgaa 31880
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>gb|AY293855.1| Homo sapiens insulin-like growth factor 2 receptor (IGF2R) gene,
            complete cds
          Length = 139947

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 20   gaaaaattaaacacaactt 38
            |||||||||||||||||||
Sbjct: 3613 gaaaaattaaacacaactt 3595
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>emb|BX664732.7| Mouse DNA sequence from clone RP23-452F17 on chromosome X, complete
             sequence
          Length = 87723

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 5     aaatgaaattgatatgaaa 23
             |||||||||||||||||||
Sbjct: 33317 aaatgaaattgatatgaaa 33299
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>gb|AC092421.2| Homo sapiens chromosome 3 clone RP11-476A24, complete sequence
          Length = 160726

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 8     tgaaattgatatgaaaaat 26
             |||||||||||||||||||
Sbjct: 40670 tgaaattgatatgaaaaat 40688
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>gb|AC008871.5| Homo sapiens chromosome 5 clone CTD-2197I11, complete sequence
          Length = 174138

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 10     aaattgatatgaaaaatta 28
              |||||||||||||||||||
Sbjct: 154447 aaattgatatgaaaaatta 154465
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>gb|AF069333.2|AF069333 Homo sapiens insulin-like growth factor II receptor (IGF2R) gene,
            partial cds
          Length = 138376

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 20   gaaaaattaaacacaactt 38
            |||||||||||||||||||
Sbjct: 3323 gaaaaattaaacacaactt 3305
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>gb|AF348209.1|AF348209 Homo sapiens IGF2R gene, complete cds
          Length = 137436

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 20   gaaaaattaaacacaactt 38
            |||||||||||||||||||
Sbjct: 2383 gaaaaattaaacacaactt 2365
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 12      attgatatgaaaaattaaa 30
               |||||||||||||||||||
Sbjct: 3778673 attgatatgaaaaattaaa 3778691
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>gb|AC084520.1|CBRG18K16 Caenorhabditis briggsae cosmid G18K16, complete sequence
          Length = 41648

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    aaattgatatgaaaaatta 28
             |||||||||||||||||||
Sbjct: 33689 aaattgatatgaaaaatta 33707
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>emb|BX322651.3| Zebrafish DNA sequence from clone DKEYP-32G10, complete sequence
          Length = 152913

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 14    tgatatgaaaaattaaacacaac 36
             |||||||||||| ||||||||||
Sbjct: 48902 tgatatgaaaaactaaacacaac 48924
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>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome
          Length = 1308759

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 7      atgaaattgatatgaaaaa 25
              |||||||||||||||||||
Sbjct: 388721 atgaaattgatatgaaaaa 388703
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>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0496D04
          Length = 197358

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 12    attgatatgaaaaattaaa 30
             |||||||||||||||||||
Sbjct: 17785 attgatatgaaaaattaaa 17803
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>emb|BX005357.10| Zebrafish DNA sequence from clone CH211-120C8, complete sequence
          Length = 159670

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 9     gaaattgatatgaaaaatt 27
             |||||||||||||||||||
Sbjct: 14221 gaaattgatatgaaaaatt 14203
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>emb|BX682540.5| Mouse DNA sequence from clone RP23-383O14 on chromosome X, complete
             sequence
          Length = 191028

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 5     aaatgaaattgatatgaaa 23
             |||||||||||||||||||
Sbjct: 18248 aaatgaaattgatatgaaa 18230
to top
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0050F10
          Length = 151986

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 12     attgatatgaaaaattaaa 30
              |||||||||||||||||||
Sbjct: 123024 attgatatgaaaaattaaa 123042
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>emb|AL954129.11| Zebrafish DNA sequence from clone CH211-200P22 in linkage group 24,
             complete sequence
          Length = 161275

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 12    attgatatgaaaaattaaa 30
             |||||||||||||||||||
Sbjct: 35025 attgatatgaaaaattaaa 35043
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>emb|AL671630.10| Mouse DNA sequence from clone RP23-327E13 on chromosome X, complete
             sequence
          Length = 173634

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 5     aaatgaaattgatatgaaa 23
             |||||||||||||||||||
Sbjct: 86808 aaatgaaattgatatgaaa 86790
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>gb|AC002430.1|AC002430 Human BAC clone CTB-66D11 from 7q22, complete sequence
          Length = 140856

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 10     aaattgatatgaaaaatta 28
              |||||||||||||||||||
Sbjct: 136512 aaattgatatgaaaaatta 136530
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>gb|U58761.2| Caenorhabditis elegans cosmid C01F1, complete sequence
          Length = 39188

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 20    gaaaaattaaacacaacttgaaa 42
             |||||||||||||||| ||||||
Sbjct: 36345 gaaaaattaaacacaaattgaaa 36367
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>emb|CR318631.5| Zebrafish DNA sequence from clone DKEY-207D5 in linkage group 18,
              complete sequence
          Length = 189711

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 2      atcaaatgaaattgatatg 20
              |||||||||||||||||||
Sbjct: 114131 atcaaatgaaattgatatg 114113
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>emb|BX649507.3| Zebrafish DNA sequence from clone CH211-154H20 in linkage group 18,
             complete sequence
          Length = 166185

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 2     atcaaatgaaattgatatg 20
             |||||||||||||||||||
Sbjct: 40816 atcaaatgaaattgatatg 40834
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>emb|BX000347.7| Zebrafish DNA sequence from clone DKEY-66C4 in linkage group 18,
             complete sequence
          Length = 155713

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 2     atcaaatgaaattgatatg 20
             |||||||||||||||||||
Sbjct: 50870 atcaaatgaaattgatatg 50888
to top
>emb|Z70308.1|CEF49E11 Caenorhabditis elegans Cosmid F49E11, complete sequence
          Length = 32458

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 11    aattgatatgaaaaattaa 29
             |||||||||||||||||||
Sbjct: 11138 aattgatatgaaaaattaa 11156
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>gb|AC106833.10| Mus musculus chromosome 19, clone RP24-503K22, complete sequence
          Length = 180887

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 73    aacacatgcataaaattaa 91
             |||||||||||||||||||
Sbjct: 39799 aacacatgcataaaattaa 39781
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>emb|AL671782.5| Mouse DNA sequence from clone RP23-102I3 on chromosome X, complete
              sequence
          Length = 192583

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 74     acacatgcataaaattaaa 92
              |||||||||||||||||||
Sbjct: 182034 acacatgcataaaattaaa 182052
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>gb|AC026911.15| Mus musculus chromosome 1, clone RP23-190F21, complete sequence
          Length = 239743

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 14     tgatatgaaaaattaaaca 32
              |||||||||||||||||||
Sbjct: 196850 tgatatgaaaaattaaaca 196832
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>gb|AC090692.9| Homo sapiens chromosome 11, clone RP11-698N11, complete sequence
          Length = 179494

 Score = 38.2 bits (19), Expect = 5.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 12     attgatatgaaaaattaaacaca 34
              ||||| |||||||||||||||||
Sbjct: 162656 attgaaatgaaaaattaaacaca 162634


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,555,462
Number of Sequences: 3902068
Number of extensions: 1555462
Number of successful extensions: 114549
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114194
Number of HSP's gapped (non-prelim): 354
length of query: 114
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 93
effective length of database: 17,151,101,840
effective search space: 1595052471120
effective search space used: 1595052471120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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