ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet16h10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ422119.1|TAE422119 Triticum aestivum mRNA for xylanase inhibitor protein I (xipI gene) Length = 915 Score = 125 bits (63), Expect = 5e-26 Identities = 66/67 (98%) Strand = Plus / Minus Query: 112 tcaggcgtagtacttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtccca 171 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 915 tcaggcgtagtacttgatcaagctgctgtagttggtctgcttgtcgaagtatcggtccca 856 Query: 172 gagcatg 178 ||||||| Sbjct: 855 gagcatg 849
>dbj|AB204556.1| Triticum aestivum Xip-III gene for xylanase inhibitor XIP-III, complete cds Length = 934 Score = 85.7 bits (43), Expect = 4e-14 Identities = 61/67 (91%) Strand = Plus / Minus Query: 112 tcaggcgtagtacttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtccca 171 |||||||||||||||||| |||| ||||||| | |||||||||||||||| |||||||| Sbjct: 932 tcaggcgtagtacttgatgtagctactgtagtcgctctgcttgtcgaagtatcggtccca 873 Query: 172 gagcatg 178 ||||||| Sbjct: 872 gagcatg 866
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 145 ggtctgcttgtcgaagtaccggtcccagagcatg 178 ||||||||||||| || ||| ||||||||||||| Sbjct: 82293 ggtctgcttgtcgtagaacctgtcccagagcatg 82260 Score = 38.2 bits (19), Expect = 8.7 Identities = 25/27 (92%) Strand = Plus / Minus Query: 138 tgtagttggtctgcttgtcgaagtacc 164 ||||||||| || |||||||||||||| Sbjct: 58508 tgtagttggccttcttgtcgaagtacc 58482
>emb|AL355305.9| Human DNA sequence from clone RP11-487F23 on chromosome 6 Contains the 5' end of the gene for p53 regulated PA26 nuclear protein (PA26-T1), a novel gene and part of a novel gene, complete sequence Length = 185257 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 tcaatattatttttatttatcc 24 |||||||||||||||||||||| Sbjct: 130906 tcaatattatttttatttatcc 130885
>ref|XM_792322.1| PREDICTED: Strongylocentrotus purpuratus similar to putative endoplasmic reticulum protein, with at least 5 transmembrane domains, of eukaryotic origin (56.3 kD) (4P439) (LOC592817), mRNA Length = 1917 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Plus Query: 134 ctgctgtagttggtctgcttgt 155 |||||||||||||||||||||| Sbjct: 86 ctgctgtagttggtctgcttgt 107
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 145 ggtctgcttgtcgaagtaccggtcccagagcatg 178 ||||||||||||| || ||| ||||||||||||| Sbjct: 28123738 ggtctgcttgtcgtagaacctgtcccagagcatg 28123705 Score = 38.2 bits (19), Expect = 8.7 Identities = 25/27 (92%) Strand = Plus / Minus Query: 138 tgtagttggtctgcttgtcgaagtacc 164 ||||||||| || |||||||||||||| Sbjct: 28099241 tgtagttggccttcttgtcgaagtacc 28099215
>dbj|AK102862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111J19, full insert sequence Length = 1176 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 145 ggtctgcttgtcgaagtaccggtcccagagcatg 178 ||||||||||||| || ||| ||||||||||||| Sbjct: 988 ggtctgcttgtcgtagaacctgtcccagagcatg 955
>dbj|AK063939.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-E01, full insert sequence Length = 1234 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 145 ggtctgcttgtcgaagtaccggtcccagagcatg 178 ||||||||||||| || ||| ||||||||||||| Sbjct: 989 ggtctgcttgtcgtagaacctgtcccagagcatg 956
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 145 ggtctgcttgtcgaagtaccggtcccagagcatg 178 ||||||||||||| || ||| ||||||||||||| Sbjct: 28108616 ggtctgcttgtcgtagaacctgtcccagagcatg 28108583 Score = 38.2 bits (19), Expect = 8.7 Identities = 25/27 (92%) Strand = Plus / Minus Query: 138 tgtagttggtctgcttgtcgaagtacc 164 ||||||||| || |||||||||||||| Sbjct: 28084119 tgtagttggccttcttgtcgaagtacc 28084093
>dbj|D55712.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1220 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 145 ggtctgcttgtcgaagtaccggtcccagagcatg 178 ||||||||||||| || ||| ||||||||||||| Sbjct: 963 ggtctgcttgtcgtagaacctgtcccagagcatg 930
>dbj|AB027420.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C60571 Length = 1220 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 145 ggtctgcttgtcgaagtaccggtcccagagcatg 178 ||||||||||||| || ||| ||||||||||||| Sbjct: 975 ggtctgcttgtcgtagaacctgtcccagagcatg 942
>dbj|AB027419.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C11701 Length = 1171 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 145 ggtctgcttgtcgaagtaccggtcccagagcatg 178 ||||||||||||| || ||| ||||||||||||| Sbjct: 933 ggtctgcttgtcgtagaacctgtcccagagcatg 900
>dbj|AB027418.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C12269 Length = 1214 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 145 ggtctgcttgtcgaagtaccggtcccagagcatg 178 ||||||||||||| || ||| ||||||||||||| Sbjct: 973 ggtctgcttgtcgtagaacctgtcccagagcatg 940
>dbj|AB027417.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C3540 Length = 1229 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 145 ggtctgcttgtcgaagtaccggtcccagagcatg 178 ||||||||||||| || ||| ||||||||||||| Sbjct: 972 ggtctgcttgtcgtagaacctgtcccagagcatg 939
>dbj|AB027416.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds,clone:C10295 Length = 1199 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 145 ggtctgcttgtcgaagtaccggtcccagagcatg 178 ||||||||||||| || ||| ||||||||||||| Sbjct: 954 ggtctgcttgtcgtagaacctgtcccagagcatg 921
>dbj|AB027415.1| Oryza sativa (japonica cultivar-group) mRNA for class III chitinase homologue (OsChib3H-a)H-, complete cds, clone:C60129 Length = 1187 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 145 ggtctgcttgtcgaagtaccggtcccagagcatg 178 ||||||||||||| || ||| ||||||||||||| Sbjct: 957 ggtctgcttgtcgtagaacctgtcccagagcatg 924
>ref|XM_739509.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000694.02.0) partial mRNA Length = 1389 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ttcaatattatttttatttat 22 ||||||||||||||||||||| Sbjct: 1326 ttcaatattatttttatttat 1306
>ref|XM_738031.1| Plasmodium chabaudi chabaudi hypothetical protein (PC300959.00.0) partial mRNA Length = 1317 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ttcaatattatttttatttat 22 ||||||||||||||||||||| Sbjct: 531 ttcaatattatttttatttat 511
>emb|CR661974.2|CNS0F9R0 Tetraodon nigroviridis full-length cDNA Length = 1323 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 tattatttttatttatccaag 27 ||||||||||||||||||||| Sbjct: 1059 tattatttttatttatccaag 1079
>gb|AC147266.6| Mus musculus BAC clone RP24-246F6 from 8, complete sequence Length = 228955 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ttcaatattatttttatttat 22 ||||||||||||||||||||| Sbjct: 125990 ttcaatattatttttatttat 126010
>gb|AC123825.5| Mus musculus BAC clone RP24-93F18 from 8, complete sequence Length = 236875 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ttcaatattatttttatttat 22 ||||||||||||||||||||| Sbjct: 199801 ttcaatattatttttatttat 199781
>gb|AY702979.1| Capsicum annuum clone YAC YCA22D8 genomic sequence Length = 103975 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 caatattatttttatttatc 23 |||||||||||||||||||| Sbjct: 23974 caatattatttttatttatc 23993
>gb|AE017133.1| Yersinia pestis biovar Medievalis str. 91001 section 7 of 16 of the complete genome Length = 290874 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gttcaatattatttttattt 20 |||||||||||||||||||| Sbjct: 164098 gttcaatattatttttattt 164117
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gttcaatattatttttattt 20 |||||||||||||||||||| Sbjct: 2053875 gttcaatattatttttattt 2053894
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gttcaatattatttttattt 20 |||||||||||||||||||| Sbjct: 2809199 gttcaatattatttttattt 2809180
>emb|AL031603.1|SPCC330 S.pombe chromosome III cosmid c330 Length = 42689 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ttcaatattatttttattta 21 |||||||||||||||||||| Sbjct: 27222 ttcaatattatttttattta 27241
>emb|AJ414150.1| Yersinia pestis strain CO92 complete genome; segment 10/20 Length = 335050 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gttcaatattatttttattt 20 |||||||||||||||||||| Sbjct: 7551 gttcaatattatttttattt 7570
>emb|AL845544.11| Zebrafish DNA sequence from clone BUSM1-133F4 in linkage group 7 Contains three CpG islands, complete sequence Length = 110786 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 caatacatcagaatcaaatc 76 |||||||||||||||||||| Sbjct: 43424 caatacatcagaatcaaatc 43405
>gb|AC158922.8| Mus musculus chromosome 15, clone RP23-182C12, complete sequence Length = 201723 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 aatattatttttatttatccaagt 28 |||||||||||||||||| ||||| Sbjct: 72748 aatattatttttatttatacaagt 72771
>ref|NM_001022705.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC330.10), partial mRNA Length = 1170 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ttcaatattatttttattta 21 |||||||||||||||||||| Sbjct: 890 ttcaatattatttttattta 909
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5) Length = 2199546 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gttcaatattatttttattt 20 |||||||||||||||||||| Sbjct: 1902942 gttcaatattatttttattt 1902923
>gb|AC160641.2| Ornithorhynchus anatinus BAC clone OABb-469P24 from chromosome unknown, complete sequence Length = 128941 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 attatttttatttatccaagtaca 31 ||||| |||||||||||||||||| Sbjct: 66721 attatctttatttatccaagtaca 66744
>gb|AC153945.5| Mus musculus 10 BAC RP24-501G17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 179734 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 tcaatattatttttatttat 22 |||||||||||||||||||| Sbjct: 93207 tcaatattatttttatttat 93226
>emb|AL672307.9| Mouse DNA sequence from clone RP23-141N2 on chromosome 2, complete sequence Length = 206168 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ttcaatattatttttattta 21 |||||||||||||||||||| Sbjct: 170037 ttcaatattatttttattta 170056
>gb|AC114608.5| Mus musculus chromosome 8, clone RP23-418L5, complete sequence Length = 190200 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 9 ttatttttatttatccaagtaca 31 |||||||||||||| |||||||| Sbjct: 179484 ttatttttatttatacaagtaca 179506
>gb|AC154107.3| Mus musculus BAC clone RP23-67L1 from chromosome 8, complete sequence Length = 246658 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 ttttatttatccaagtaca 31 ||||||||||||||||||| Sbjct: 66121 ttttatttatccaagtaca 66139
>gb|AC099614.9| Mus musculus chromosome 15, clone RP23-408O11, complete sequence Length = 201092 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 ttcaatattatttttattt 20 ||||||||||||||||||| Sbjct: 58678 ttcaatattatttttattt 58696
>gb|AE014827.1| Plasmodium falciparum 3D7 chromosome 14 section 12 of 13 of the complete sequence Length = 254436 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 tcaatattatttttattta 21 ||||||||||||||||||| Sbjct: 129302 tcaatattatttttattta 129320
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia Length = 211009 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 caatattatttttatttat 22 ||||||||||||||||||| Sbjct: 1244 caatattatttttatttat 1262
>gb|AC136004.10| Mus musculus chromosome 7, clone RP23-235M8, complete sequence Length = 185174 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 caatattatttttatttat 22 ||||||||||||||||||| Sbjct: 120474 caatattatttttatttat 120456
>gb|AC118637.18| Mus musculus chromosome 8, clone RP24-107N18, complete sequence Length = 181693 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 3 tcaatattatttttattta 21 ||||||||||||||||||| Sbjct: 13156 tcaatattatttttattta 13138
>gb|AC133206.3| Mus musculus BAC clone RP23-110D10 from chromosome 1, complete sequence Length = 177383 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 aatattatttttatttatc 23 ||||||||||||||||||| Sbjct: 146337 aatattatttttatttatc 146319
>gb|AC124475.3| Mus musculus BAC clone RP24-92F8 from chromosome 8, complete sequence Length = 212858 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 9 ttatttttatttatccaagtaca 31 |||||||||||||| |||||||| Sbjct: 110668 ttatttttatttatacaagtaca 110646
>gb|AC145944.3| Gallus gallus chromosome UNK clone CH261-22N7, complete sequence Length = 215147 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 aatattatttttatttatc 23 ||||||||||||||||||| Sbjct: 106231 aatattatttttatttatc 106249
>gb|AY446904.1| Calanus finmarchicus 18S ribosomal RNA gene, partial sequence Length = 374 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 tccaagtacaagcctcact 40 ||||||||||||||||||| Sbjct: 35 tccaagtacaagcctcact 53
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 tattatttttatttatcca 25 ||||||||||||||||||| Sbjct: 9296568 tattatttttatttatcca 9296586
>gb|AC161884.5| Mus musculus BAC clone RP23-77K23 from chromosome 14, complete sequence Length = 243730 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 attatttttatttatccaa 26 ||||||||||||||||||| Sbjct: 205133 attatttttatttatccaa 205151
>emb|BX548019.36| Zebrafish DNA sequence from clone DKEY-20D1 in linkage group 6, complete sequence Length = 202848 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 137 ctgtagttggtctgcttgt 155 ||||||||||||||||||| Sbjct: 108099 ctgtagttggtctgcttgt 108081
>emb|CR388121.11| Zebrafish DNA sequence from clone DKEY-161F5 in linkage group 15, complete sequence Length = 179357 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 tattatttttatttatcca 25 ||||||||||||||||||| Sbjct: 12183 tattatttttatttatcca 12165
>gb|AC126027.4| Mus musculus BAC clone RP24-490F3 from chromosome 18, complete sequence Length = 172078 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 ttcaatattatttttattt 20 ||||||||||||||||||| Sbjct: 97503 ttcaatattatttttattt 97485
>emb|CR628324.7| Zebrafish DNA sequence from clone CH211-191A3 in linkage group 17, complete sequence Length = 79534 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 57 caatacatcagaatcaaat 75 ||||||||||||||||||| Sbjct: 1528 caatacatcagaatcaaat 1510
>gb|AC129301.3| Mus musculus BAC clone RP24-434C14 from chromosome 8, complete sequence Length = 181111 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 tcaatattatttttattta 21 ||||||||||||||||||| Sbjct: 79596 tcaatattatttttattta 79614
>gb|AC122323.3| Mus musculus BAC clone RP23-326N21 from chromosome 8, complete sequence Length = 212949 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 ttttatttatccaagtaca 31 ||||||||||||||||||| Sbjct: 180103 ttttatttatccaagtaca 180121
>gb|AC122799.4| Mus musculus BAC clone RP23-308K11 from 16, complete sequence Length = 203686 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 52 tgcagcaatacatcagaat 70 ||||||||||||||||||| Sbjct: 142803 tgcagcaatacatcagaat 142821
>gb|AC121937.2| Mus musculus BAC clone RP24-207M20 from 9, complete sequence Length = 169399 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 9 ttatttttatttatccaagtaca 31 |||||||||||||| |||||||| Sbjct: 109432 ttatttttatttatacaagtaca 109410
>ref|XM_738810.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000486.04.0) partial mRNA Length = 1155 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 ttcaatattatttttattt 20 ||||||||||||||||||| Sbjct: 102 ttcaatattatttttattt 120
>ref|XM_661008.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.40150) partial mRNA Length = 1794 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 ttcaatattatttttattt 20 ||||||||||||||||||| Sbjct: 540 ttcaatattatttttattt 522
>gb|AC117667.9| Mus musculus chromosome 6, clone RP23-367C6, complete sequence Length = 134538 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 9 ttatttttatttatccaagtaca 31 |||||||||||||| |||||||| Sbjct: 106766 ttatttttatttatacaagtaca 106744
>gb|AC162361.7| Mus musculus chromosome 7, clone RP23-177P20, complete sequence Length = 230870 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 caatattatttttatttat 22 ||||||||||||||||||| Sbjct: 204913 caatattatttttatttat 204895
>emb|AL590608.6| Human DNA sequence from clone RP11-363F12 on chromosome 6, complete sequence Length = 200337 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 tattatttttatttatcca 25 ||||||||||||||||||| Sbjct: 75722 tattatttttatttatcca 75704
>emb|AL590392.5| Human DNA sequence from clone RP11-453D21 on chromosome 6, complete sequence Length = 104011 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 11 atttttatttatccaagtacaag 33 ||||||||||| ||||||||||| Sbjct: 68560 atttttatttacccaagtacaag 68538
>gb|AE014837.1| Plasmodium falciparum 3D7 chromosome 11 section 2 of 8 of the complete sequence Length = 257757 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 caatattatttttatttat 22 ||||||||||||||||||| Sbjct: 71914 caatattatttttatttat 71932
>gb|AC115102.7| Homo sapiens chromosome 15, clone RP11-245C17, complete sequence Length = 165747 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 11 atttttatttatccaagta 29 ||||||||||||||||||| Sbjct: 107091 atttttatttatccaagta 107073
>emb|AL356750.16| Human DNA sequence from clone RP11-374F3 on chromosome 13 Contains the KATNAL1 gene for katanin p60 subunit A-like 1, a peroxiredoxin 2 (PRDX2) pseudogene, two novel genes and two CpG islands, complete sequence Length = 182303 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 5 aatattatttttatttatccaag 27 ||||||||||| ||||||||||| Sbjct: 77732 aatattattttgatttatccaag 77754
>gb|AC048382.7| Homo sapiens chromosome 15, clone RP11-182J1, complete sequence Length = 171486 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 atttttatttatccaagta 29 ||||||||||||||||||| Sbjct: 98094 atttttatttatccaagta 98112
>gb|AC120768.5| Rattus norvegicus 7 BAC CH230-152B10 (Children's Hospital Oakland Research Institute) complete sequence Length = 221436 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 tcaatattatttttattta 21 ||||||||||||||||||| Sbjct: 207956 tcaatattatttttattta 207974
>emb|AL009181.1|HS212P9 Human DNA sequence from clone RP1-212P9 on chromosome 1p34.1-35 Contains the OPRD1 gene for opioid receptor delta 1, two novel genes, the 5' end of the EPB41 gene for erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) and a CpG island, complete sequence Length = 148540 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 126 tgatcaagctgctgtagttggtc 148 |||| |||||||||||||||||| Sbjct: 102937 tgatgaagctgctgtagttggtc 102959
>gb|AF514344.1| Neocalanus cristatus clone A line 18S ribosomal RNA gene, partial sequence Length = 1802 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 tccaagtacaagcctcact 40 ||||||||||||||||||| Sbjct: 57 tccaagtacaagcctcact 75
>gb|AF514343.1| Neocalanus cristatus clone Nihon 18S ribosomal RNA gene, partial sequence Length = 1802 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 tccaagtacaagcctcact 40 ||||||||||||||||||| Sbjct: 57 tccaagtacaagcctcact 75
>gb|AF514342.1| Neocalanus cristatus clone Papa 18S ribosomal RNA gene, partial sequence Length = 1802 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 tccaagtacaagcctcact 40 ||||||||||||||||||| Sbjct: 57 tccaagtacaagcctcact 75
>gb|AF514341.1| Neocalanus cristatus clone Bering 18S ribosomal RNA gene, partial sequence Length = 1802 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 tccaagtacaagcctcact 40 ||||||||||||||||||| Sbjct: 57 tccaagtacaagcctcact 75
>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence Length = 984602 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 attatttttatttatccaa 26 ||||||||||||||||||| Sbjct: 201409 attatttttatttatccaa 201427
>emb|CR378675.1| Photobacterium profundum SS9 chromosome 2; segment 1/7 Length = 349544 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 34 cctcactttattctcgctt 52 ||||||||||||||||||| Sbjct: 53027 cctcactttattctcgctt 53009
>emb|CR378665.1| Photobacterium profundum SS9; segment 3/12 Length = 347213 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 tattatttttatttatcca 25 ||||||||||||||||||| Sbjct: 55386 tattatttttatttatcca 55368
>emb|BX294141.1| Pirellula sp. strain 1 complete genome; segment 9/24 Length = 299350 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 122 tacttgatcaagctgctgt 140 ||||||||||||||||||| Sbjct: 278748 tacttgatcaagctgctgt 278766
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 155 tcgaagtaccggtcccaga 173 ||||||||||||||||||| Sbjct: 54269 tcgaagtaccggtcccaga 54251
>emb|AL596110.15| Mouse DNA sequence from clone RP23-330N10 on chromosome 11 Contains the 3' end of a variant of the gene for a novel protein similar to human sperm antigen HCMOGT-1 (B230396K10Rik), the Adora2b gene for adenosine A2b receptor, the gene for a novel protein (2410012H22Rik), a somatic cytochrome c (Cycs) pseudogene, a novel gene, a novel pseudogene, the gene for a novel protein (2810460C24Rik), the 3' end of the Ncor1 gene for nuclear receptor co-repressor 1 and two CpG islands, complete sequence Length = 214834 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 9 ttatttttatttatccaagtaca 31 |||||||||||||| |||||||| Sbjct: 34428 ttatttttatttatacaagtaca 34450
>gb|AC152392.6| Mus musculus chromosome 1, clone RP23-300P10, complete sequence Length = 225267 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 aatattatttttatttatc 23 ||||||||||||||||||| Sbjct: 1987 aatattatttttatttatc 1969
>gb|AC107025.3| Homo sapiens 3 BAC RP11-474M18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178033 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 attatttttatttatccaa 26 ||||||||||||||||||| Sbjct: 124693 attatttttatttatccaa 124711
>emb|CR392344.7| Zebrafish DNA sequence from clone CH211-239D11 in linkage group 20 Contains the 3' end of the gene for a novel protein similar to vertebrate X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining; Ku autoantigen, 80kDa) (XRCC5), the gene for a novel protein similar to vertebrate SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily a-like 1 (SMARCAL1), two novel genes and three CpG islands, complete sequence Length = 150882 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 4 caatattatttttatttatccaa 26 ||||||||||||||||| ||||| Sbjct: 2520 caatattatttttatttctccaa 2498
>gb|AC130470.2| Homo sapiens chromosome 16 clone RP11-143P24, complete sequence Length = 16499 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 1 gttcaatattatttttatttatc 23 |||| |||||||||||||||||| Sbjct: 7145 gttctatattatttttatttatc 7123
>gb|AY118071.1| Calanoides acutus 18S ribosomal RNA gene, partial sequence Length = 664 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 tccaagtacaagcctcact 40 ||||||||||||||||||| Sbjct: 18 tccaagtacaagcctcact 36
>gb|AY118066.1| Calanus propinquus 18S ribosomal RNA gene, partial sequence Length = 664 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 tccaagtacaagcctcact 40 ||||||||||||||||||| Sbjct: 18 tccaagtacaagcctcact 36
>emb|BX537141.17| Zebrafish DNA sequence from clone DKEY-9E8 in linkage group 2, complete sequence Length = 264534 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 7 tattatttttatttatccaagta 29 |||||||||||||||| |||||| Sbjct: 242606 tattatttttatttattcaagta 242584
>gb|AC155101.19| Medicago truncatula clone mth2-139j13, complete sequence Length = 124152 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 ttcaatattatttttattt 20 ||||||||||||||||||| Sbjct: 521 ttcaatattatttttattt 503
>gb|AC107065.5| Bos taurus clone rp42-513g13, complete sequence Length = 175949 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 gttcaatattatttttatt 19 ||||||||||||||||||| Sbjct: 137438 gttcaatattatttttatt 137456
>gb|AC092867.7| Homo sapiens 12p BAC RP11-100C20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 195583 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 aatattatttttatttatc 23 ||||||||||||||||||| Sbjct: 193149 aatattatttttatttatc 193131
>gb|AC021064.20| Homo sapiens 3 BAC RP11-49A15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162895 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 ttcaatattatttttattt 20 ||||||||||||||||||| Sbjct: 97512 ttcaatattatttttattt 97530
>gb|AF462322.1|AF462322 Undinula vulgaris 18S ribosomal RNA gene, partial sequence Length = 650 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 tccaagtacaagcctcact 40 ||||||||||||||||||| Sbjct: 24 tccaagtacaagcctcact 42
>gb|AF462319.1|AF462319 Cosmocalanus darwinii 18S ribosomal RNA gene, partial sequence Length = 657 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 tccaagtacaagcctcact 40 ||||||||||||||||||| Sbjct: 33 tccaagtacaagcctcact 51
>emb|BX255915.13| Zebrafish DNA sequence from clone CH211-245L1 in linkage group 5, complete sequence Length = 157382 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 28 tacaagcctcactttattc 46 ||||||||||||||||||| Sbjct: 77503 tacaagcctcactttattc 77485
>emb|BX001031.19| Zebrafish DNA sequence from clone CH211-242A9, complete sequence Length = 192207 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 ttgcagcaatacatcagaa 69 ||||||||||||||||||| Sbjct: 15375 ttgcagcaatacatcagaa 15357
>gb|L81939.1| Calanus pacificus 18S ribosomal RNA gene, complete sequence Length = 1800 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 tccaagtacaagcctcact 40 ||||||||||||||||||| Sbjct: 54 tccaagtacaagcctcact 72
>emb|BX571699.10| Zebrafish DNA sequence from clone DKEYP-116G9 in linkage group 6, complete sequence Length = 173467 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 137 ctgtagttggtctgcttgt 155 ||||||||||||||||||| Sbjct: 37559 ctgtagttggtctgcttgt 37577
>gb|AC157954.2| Pan troglodytes BAC clone CH251-514O14 from chromosome unknown, complete sequence Length = 210950 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 5 aatattatttttatttatccaag 27 ||||||||||| ||||||||||| Sbjct: 62958 aatattattttgatttatccaag 62936
>gb|AC157591.2| Mus musculus BAC clone RP23-311C13 from chromosome 9, complete sequence Length = 213461 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 9 ttatttttatttatccaagtaca 31 |||||||||||||| |||||||| Sbjct: 180853 ttatttttatttatacaagtaca 180875
>gb|AC158519.2| Mus musculus BAC clone RP24-87O4 from chromosome 14, complete sequence Length = 236374 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 ttcaatattatttttattt 20 ||||||||||||||||||| Sbjct: 219173 ttcaatattatttttattt 219155
>gb|AC155939.6| Mus musculus 10 BAC RP24-418P10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 158211 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 9 ttatttttatttatccaagtaca 31 |||||||||||||| |||||||| Sbjct: 99872 ttatttttatttatacaagtaca 99850
>dbj|AK051593.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130059B08 product:unclassifiable, full insert sequence Length = 861 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 9 ttatttttatttatccaagtaca 31 |||||||||||||| |||||||| Sbjct: 146 ttatttttatttatacaagtaca 168
>dbj|AK039642.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330077C18 product:unclassifiable, full insert sequence Length = 665 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 9 ttatttttatttatccaagtaca 31 |||||||||||||| |||||||| Sbjct: 657 ttatttttatttatacaagtaca 635
>dbj|AK080460.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730020G15 product:unclassifiable, full insert sequence Length = 3096 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 caatattatttttatttat 22 ||||||||||||||||||| Sbjct: 2682 caatattatttttatttat 2664
>gb|AC092232.1|AC092232 Drosophila melanogaster, chromosome 2L, region 24E-24F, BAC clone BACR28K16, complete sequence Length = 182897 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 97 ttgtgcaagtatagctcag 115 ||||||||||||||||||| Sbjct: 57075 ttgtgcaagtatagctcag 57057
>emb|BX322616.8| Zebrafish DNA sequence from clone DKEY-21K24 in linkage group 25, complete sequence Length = 232304 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 3 tcaatattatttttattta 21 ||||||||||||||||||| Sbjct: 13013 tcaatattatttttattta 12995
>dbj|AK085783.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched library, clone:D830009A19 product:unclassifiable, full insert sequence Length = 2282 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 9 ttatttttatttatccaagtaca 31 |||||||||||||| |||||||| Sbjct: 364 ttatttttatttatacaagtaca 386
>gb|AF367719.1|AF367719 Calanus finmarchicus 18S small subunit ribosomal RNA gene, partial sequence Length = 1749 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 tccaagtacaagcctcact 40 ||||||||||||||||||| Sbjct: 40 tccaagtacaagcctcact 58
>gb|AF367716.1|AF367716 Mesocalanus tenuicornis 18S ribosomal RNA gene, partial sequence Length = 657 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 tccaagtacaagcctcact 40 ||||||||||||||||||| Sbjct: 33 tccaagtacaagcctcact 51
>gb|AF367715.1|AF367715 Nannocalanus minor 18S ribosomal RNA gene, partial sequence Length = 657 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 tccaagtacaagcctcact 40 ||||||||||||||||||| Sbjct: 33 tccaagtacaagcctcact 51
>gb|AF367714.1|AF367714 Calanus finmarchicus 18S ribosomal RNA gene, partial sequence Length = 658 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 tccaagtacaagcctcact 40 ||||||||||||||||||| Sbjct: 33 tccaagtacaagcctcact 51
>gb|AF367713.1|AF367713 Neocalanus tonsus 18S ribosomal RNA gene, partial sequence Length = 657 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 tccaagtacaagcctcact 40 ||||||||||||||||||| Sbjct: 33 tccaagtacaagcctcact 51
>gb|AF367712.1|AF367712 Calanoides acutus 18S ribosomal RNA gene, partial sequence Length = 657 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 tccaagtacaagcctcact 40 ||||||||||||||||||| Sbjct: 33 tccaagtacaagcctcact 51
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 tattatttttatttatcca 25 ||||||||||||||||||| Sbjct: 9294401 tattatttttatttatcca 9294419
>gb|AC026310.24|AC026310 Homo sapiens 12 BAC RP11-662I13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 124000 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 aatattatttttatttatc 23 ||||||||||||||||||| Sbjct: 37416 aatattatttttatttatc 37398
>gb|AC023545.16| Homo sapiens chromosome 15, clone RP11-665J16, complete sequence Length = 108173 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 3 tcaatattatttttattta 21 ||||||||||||||||||| Sbjct: 3758 tcaatattatttttattta 3740
>dbj|AB222209.1| Tetrahymena thermophila MYO4 mRNA for myosin 4, complete cds Length = 5391 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 ttcaatattatttttattt 20 ||||||||||||||||||| Sbjct: 693 ttcaatattatttttattt 675
>gb|AC007291.24|AC007291 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR02I05, complete sequence Length = 176075 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 tcaatattatttttattta 21 ||||||||||||||||||| Sbjct: 148747 tcaatattatttttattta 148765
>gb|AC010931.17| Homo sapiens chromosome 15, clone RP11-247C2, complete sequence Length = 93600 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 tcaatattatttttattta 21 ||||||||||||||||||| Sbjct: 60441 tcaatattatttttattta 60459
>gb|AC104151.5| Homo sapiens chromosome 16 clone RP11-96P7, complete sequence Length = 145574 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 gttcaatattatttttatttatc 23 |||| |||||||||||||||||| Sbjct: 2911 gttctatattatttttatttatc 2933
>ref|NM_001004566.1| Danio rerio mannosidase, endo-alpha (manea), mRNA Length = 3286 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 ttcaatattatttttattt 20 ||||||||||||||||||| Sbjct: 924 ttcaatattatttttattt 906
>gb|AC007353.5| Homo sapiens chromosome 16 clone RP11-488I20, complete sequence Length = 201061 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 caatattatttttatttat 22 ||||||||||||||||||| Sbjct: 54739 caatattatttttatttat 54757
>gb|AC116340.3| Homo sapiens chromosome 5 clone RP11-118I21, complete sequence Length = 160144 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 gttcaatattatttttatt 19 ||||||||||||||||||| Sbjct: 119499 gttcaatattatttttatt 119517
>gb|AC155293.3| Mus musculus BAC clone RP24-427L24 from chromosome 12, complete sequence Length = 156472 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 aatattatttttatttatc 23 ||||||||||||||||||| Sbjct: 19366 aatattatttttatttatc 19384
>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0014A21, from chromosome 3, complete sequence Length = 134014 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 tattatttttatttatcca 25 ||||||||||||||||||| Sbjct: 59685 tattatttttatttatcca 59667
>emb|BX004878.8| Zebrafish DNA sequence from clone DKEY-11H2 in linkage group 6, complete sequence Length = 254657 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 137 ctgtagttggtctgcttgt 155 ||||||||||||||||||| Sbjct: 198186 ctgtagttggtctgcttgt 198204
>dbj|BS000213.2| Pan troglodytes chromosome 22 clone:PTB-042D04, map 22, complete sequences Length = 172879 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 gttcaatattatttttatt 19 ||||||||||||||||||| Sbjct: 108003 gttcaatattatttttatt 108021
>gb|BC081681.1| Danio rerio mannosidase, endo-alpha, mRNA (cDNA clone MGC:92825 IMAGE:7090615), complete cds Length = 3286 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 ttcaatattatttttattt 20 ||||||||||||||||||| Sbjct: 924 ttcaatattatttttattt 906
>dbj|AK102731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105P15, full insert sequence Length = 1008 Score = 38.2 bits (19), Expect = 8.7 Identities = 25/27 (92%) Strand = Plus / Minus Query: 138 tgtagttggtctgcttgtcgaagtacc 164 ||||||||| || |||||||||||||| Sbjct: 843 tgtagttggccttcttgtcgaagtacc 817
>emb|AL163210.2|HS21C010 Homo sapiens chromosome 21 segment HS21C010 Length = 340000 Score = 38.2 bits (19), Expect = 8.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 58 aatacatcagaatcaaatcgacggtga 84 ||||||||||||||||| | ||||||| Sbjct: 18079 aatacatcagaatcaaacccacggtga 18105
>dbj|AK064356.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B03, full insert sequence Length = 1150 Score = 38.2 bits (19), Expect = 8.7 Identities = 25/27 (92%) Strand = Plus / Minus Query: 138 tgtagttggtctgcttgtcgaagtacc 164 ||||||||| || |||||||||||||| Sbjct: 890 tgtagttggccttcttgtcgaagtacc 864
>emb|BX901933.15| Zebrafish DNA sequence from clone DKEY-114H6 in linkage group 22, complete sequence Length = 42656 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 7 tattatttttatttatccaagta 29 |||||||||| |||||||||||| Sbjct: 17693 tattatttttttttatccaagta 17715
>emb|CR381605.5| Zebrafish DNA sequence from clone CH211-156J19 in linkage group 21, complete sequence Length = 180526 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 tcaatattatttttattta 21 ||||||||||||||||||| Sbjct: 170755 tcaatattatttttattta 170773
>gb|AC007257.9|AC007257 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR24A22, complete sequence Length = 183007 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 tcaatattatttttattta 21 ||||||||||||||||||| Sbjct: 32600 tcaatattatttttattta 32618
>gb|AE003625.3| Drosophila melanogaster chromosome 2L, section 34 of 83 of the complete sequence Length = 271507 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 3 tcaatattatttttattta 21 ||||||||||||||||||| Sbjct: 234105 tcaatattatttttattta 234087
>gb|AE003576.5| Drosophila melanogaster chromosome 2L, section 15 of 83 of the complete sequence Length = 289893 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 ttgtgcaagtatagctcag 115 ||||||||||||||||||| Sbjct: 150592 ttgtgcaagtatagctcag 150610
>dbj|AP002963.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-97I14, complete sequence Length = 183204 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 caatattatttttatttat 22 ||||||||||||||||||| Sbjct: 154282 caatattatttttatttat 154264
>dbj|AP001698.1| Homo sapiens genomic DNA, chromosome 21q, section 42/105 Length = 340000 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 gttcaatattatttttatt 19 ||||||||||||||||||| Sbjct: 94943 gttcaatattatttttatt 94961
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 caatattatttttatttat 22 ||||||||||||||||||| Sbjct: 979837 caatattatttttatttat 979855
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 10 tatttttatttatccaagtacaa 32 |||| |||||||||||||||||| Sbjct: 1172189 tattattatttatccaagtacaa 1172167
>emb|CT010491.8| Mouse DNA sequence from clone RP23-308D12 on chromosome 17, complete sequence Length = 208070 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 9 ttatttttatttatccaagtaca 31 ||||||||||||||| ||||||| Sbjct: 29362 ttatttttatttatctaagtaca 29384
>emb|CT010507.11| Mouse DNA sequence from clone RP23-259G10 on chromosome 9, complete sequence Length = 213433 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 9 ttatttttatttatccaagtaca 31 |||||||||||||| |||||||| Sbjct: 90621 ttatttttatttatacaagtaca 90643
>gb|AF047722.1|AF047722 Trypanosoma brucei rhodesiense adenylate kinase gene, complete cds, and U2 snRNA gene, complete sequence Length = 3360 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 tcactttattctcgcttgc 54 ||||||||||||||||||| Sbjct: 3318 tcactttattctcgcttgc 3336
>emb|AL831708.9| Mouse DNA sequence from clone RP23-23B17 on chromosome X, complete sequence Length = 113082 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 9 ttatttttatttatccaagtaca 31 |||||||||||||| |||||||| Sbjct: 6004 ttatttttatttatacaagtaca 5982
>emb|AL391156.3|CNS06C82 Human chromosome 14 DNA sequence BAC C-2335L22 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 137671 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 4 caatattatttttatttatccaa 26 |||||||||||||| |||||||| Sbjct: 105496 caatattatttttagttatccaa 105474
>emb|AL929445.8| Mouse DNA sequence from clone RP23-185M22 on chromosome 4, complete sequence Length = 203623 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 ttcaatattatttttattt 20 ||||||||||||||||||| Sbjct: 80446 ttcaatattatttttattt 80428
>emb|BX088567.6| Mouse DNA sequence from clone RP23-21L20 on chromosome X, complete sequence Length = 150122 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 tattatttttatttatcca 25 ||||||||||||||||||| Sbjct: 84263 tattatttttatttatcca 84245
>gb|AC125102.4| Mus musculus BAC clone RP24-208N22 from 6, complete sequence Length = 163235 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 9 ttatttttatttatccaagtaca 31 |||||||||||||| |||||||| Sbjct: 140788 ttatttttatttatacaagtaca 140810
>gb|AC130844.3| Mus musculus BAC clone RP24-529I3 from 16, complete sequence Length = 168387 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 9 ttatttttatttatccaagtaca 31 |||||||||||||| |||||||| Sbjct: 92806 ttatttttatttatacaagtaca 92828
>gb|AC004267.1|AC004267 Drosophila melanogaster DNA sequence (P1 DS07968 (D117)), complete sequence Length = 31557 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 ttgtgcaagtatagctcag 115 ||||||||||||||||||| Sbjct: 24813 ttgtgcaagtatagctcag 24831
>emb|CT010453.10| Mouse DNA sequence from clone RP23-173H11 on chromosome 14, complete sequence Length = 199017 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 ttcaatattatttttattt 20 ||||||||||||||||||| Sbjct: 160941 ttcaatattatttttattt 160923
>emb|CT571261.1| Medicago truncatula chromosome 5 clone mth2-67l4, COMPLETE SEQUENCE Length = 136545 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 97 ttgtgcaagtatagctcag 115 ||||||||||||||||||| Sbjct: 85791 ttgtgcaagtatagctcag 85773
>gb|AC002402.1|AC002402 Human Chromosome 11 pac pDJ205d23, complete sequence Length = 130381 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 5 aatattatttttatttatccaag 27 ||||||||||| ||||||||||| Sbjct: 61543 aatattattttgatttatccaag 61565
>emb|AL593847.36| Mouse DNA sequence from clone RP23-170A23 on chromosome 11, complete sequence Length = 222315 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 9 ttatttttatttatccaagtaca 31 |||||||||||||| |||||||| Sbjct: 98369 ttatttttatttatacaagtaca 98347
>emb|AL929216.6| Zebrafish DNA sequence from clone CH211-138G9 in linkage group 20, complete sequence Length = 174383 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 aatattatttttatttatc 23 ||||||||||||||||||| Sbjct: 102268 aatattatttttatttatc 102250
>gb|AC170580.3| Medicago truncatula chromosome 7 BAC clone mte1-32m6, complete sequence Length = 44332 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 aatattatttttatttatc 23 ||||||||||||||||||| Sbjct: 11046 aatattatttttatttatc 11064
>emb|AL645947.9| Mouse DNA sequence from clone RP23-338K8 on chromosome 11, complete sequence Length = 235868 Score = 38.2 bits (19), Expect = 8.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 9 ttatttttatttatccaagtaca 31 |||||||||||||| |||||||| Sbjct: 28351 ttatttttatttatacaagtaca 28373
>emb|AL034449.1|HS111K10 Homo sapiens chromosome 21 PAC RPCIP704K10111Q2, complete sequence Length = 145656 Score = 38.2 bits (19), Expect = 8.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 58 aatacatcagaatcaaatcgacggtga 84 ||||||||||||||||| | ||||||| Sbjct: 62153 aatacatcagaatcaaacccacggtga 62179
>emb|X04678.1|TBSNU2G Trypanosoma brucei gambiense U2 RNA gene Length = 372 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 tcactttattctcgcttgc 54 ||||||||||||||||||| Sbjct: 330 tcactttattctcgcttgc 348
>dbj|AP001601.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1346F10, APP-D21S292 region, complete sequence Length = 172558 Score = 38.2 bits (19), Expect = 8.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 gttcaatattatttttatt 19 ||||||||||||||||||| Sbjct: 108015 gttcaatattatttttatt 108033 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,377,615 Number of Sequences: 3902068 Number of extensions: 2377615 Number of successful extensions: 250669 Number of sequences better than 10.0: 157 Number of HSP's better than 10.0 without gapping: 157 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 249664 Number of HSP's gapped (non-prelim): 1005 length of query: 178 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 156 effective length of database: 17,147,199,772 effective search space: 2674963164432 effective search space used: 2674963164432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
