| Clone Name | rbaet16f11 |
|---|---|
| Clone Library Name | barley_pub |
>ORCT2_HUMAN (Q96BI1) Organic cation transporter-like protein 2 (Imprinted| multi-membrane spanning polyspecific transporter-related protein 1) (Efflux transporter-like protein) (Tumor-suppressing subchromosomal transferable fragment candidate gene 5 prote Length = 408 Score = 30.8 bits (68), Expect = 1.0 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = -2 Query: 101 RVASFVFVLLLFSTHWMSAVFHFLLLI 21 R + VF+++ + WMS+VFHF LL+ Sbjct: 293 RASVLVFIVVGLAMAWMSSVFHFCLLV 319
>FL3H_MATIN (Q05965) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9)| (Flavonone-3-hydroxylase) (F3H) (FHT) (Fragment) Length = 357 Score = 30.4 bits (67), Expect = 1.3 Identities = 13/29 (44%), Positives = 21/29 (72%) Frame = +1 Query: 19 FISRRKWKTADIQCVLNNNSTKTKLATRQ 105 F+S ++K AD Q V+N+NS++ +AT Q Sbjct: 263 FLSNGRFKNADHQAVVNSNSSRLSIATFQ 291
>FL3H_PETHY (Q07353) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9)| (Flavonone-3-hydroxylase) (F3H) (FHT) (Fragment) Length = 369 Score = 30.4 bits (67), Expect = 1.3 Identities = 13/29 (44%), Positives = 21/29 (72%) Frame = +1 Query: 19 FISRRKWKTADIQCVLNNNSTKTKLATRQ 105 F+S ++K AD Q V+N+NS++ +AT Q Sbjct: 267 FLSNGRFKNADHQAVVNSNSSRLSIATFQ 295
>FL3H_ARATH (Q9S818) Naringenin,2-oxoglutarate 3-dioxygenase (EC 1.14.11.9)| (Flavanone 3-hydroxylase) (Naringenin 3-dioxygenase) (FH3) (TRANSPARENT TESTA 6 protein) Length = 358 Score = 30.4 bits (67), Expect = 1.3 Identities = 13/29 (44%), Positives = 21/29 (72%) Frame = +1 Query: 19 FISRRKWKTADIQCVLNNNSTKTKLATRQ 105 F+S ++K AD Q V+N+NS++ +AT Q Sbjct: 264 FLSNGRFKNADHQAVVNSNSSRLSIATFQ 292
>YZ31_AQUAE (O66421) Hypothetical protein aq_aa31| Length = 270 Score = 29.6 bits (65), Expect = 2.3 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +1 Query: 34 KWKTADIQCVLNNNSTKTKLATRQV 108 +WK A I LNNN K K+AT V Sbjct: 125 EWKKAAIYAYLNNNGNKLKIATADV 149
>E75BB_DROME (P13055) Ecdysone-induced protein 75B isoform B (E75-C)| Length = 1412 Score = 28.5 bits (62), Expect = 5.0 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +3 Query: 42 NGGHPVCTEQQQHEDKTRH 98 NGGH +C +QQQH H Sbjct: 955 NGGHAMCQQQQQHPQLHHH 973
>E75BA_DROME (P17672) Ecdysone-induced protein 75B isoform A (E75-B)| Length = 1355 Score = 28.5 bits (62), Expect = 5.0 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +3 Query: 42 NGGHPVCTEQQQHEDKTRH 98 NGGH +C +QQQH H Sbjct: 898 NGGHAMCQQQQQHPQLHHH 916
>E75BC_DROME (P17671) Ecdysone-induced protein 75B isoforms C/D (E75-A)| Length = 1199 Score = 28.5 bits (62), Expect = 5.0 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +3 Query: 42 NGGHPVCTEQQQHEDKTRH 98 NGGH +C +QQQH H Sbjct: 742 NGGHAMCQQQQQHPQLHHH 760
>JHD3C_HUMAN (Q9H3R0) JmjC domain-containing histone demethylation protein 3C| (EC 1.14.11.-) (Jumonji domain-containing protein 2C) (Gene amplified in squamous cell carcinoma 1 protein) (GASC-1 protein) Length = 1056 Score = 28.1 bits (61), Expect = 6.6 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +2 Query: 38 GKRRTSSVY*TTTARRQNSPPVRSTMTLLKKEKKVDDDSPVPLS 169 G+ +TS + +R PP RS MTL+K++ D++ P LS Sbjct: 563 GENKTSKSWRHPLSR----PPARSPMTLVKQQAPSDEELPEVLS 602 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,312,352 Number of Sequences: 219361 Number of extensions: 445063 Number of successful extensions: 1409 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1378 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1408 length of database: 80,573,946 effective HSP length: 42 effective length of database: 71,360,784 effective search space used: 1712658816 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)