>gb|AY857762.1| Triticum monococcum peroxidase 8 (POX8) mRNA, complete cds
          Length = 1282

 Score =  127 bits (64), Expect = 9e-27
 Identities = 100/112 (89%)
 Strand = Plus / Minus

                                                                        
Query: 28   agtataggcgcgaacggacaccgactagccagcacgcccgtgcattggcattcaagcacg 87
            |||||| | |||||||||||||||| |||||||||||||||||||| ||||||||| |||
Sbjct: 1201 agtatacgtgcgaacggacaccgaccagccagcacgcccgtgcattcgcattcaaggacg 1142

                                                                
Query: 88   cacacatcaggccatggcgaccttgtcgtgcgagcccgggcggcggagcatc 139
            || ||||||| || |||||||||| ||||  |||||||| ||||||||||||
Sbjct: 1141 catacatcagcccttggcgaccttatcgtcggagcccggtcggcggagcatc 1090

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 81      aagcacgcacacatcaggcca 101
               |||||||||||||||||||||
Sbjct: 3726479 aagcacgcacacatcaggcca 3726459

>gb|AC147211.2| Xenopus tropicalis clone CH216-77F21, complete sequence
          Length = 156239

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      gcaacgtatattattcataa 28
              ||||||||||||||||||||
Sbjct: 154891 gcaacgtatattattcataa 154872

>gb|AC008082.12| Homo sapiens 3 BAC RP11-73N1 (Roswell Park Cancer Institute Human BAC
            Library) complete sequence
          Length = 171619

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   gtatattattcataagtata 33
            ||||||||||||||||||||
Sbjct: 4781 gtatattattcataagtata 4800

>gb|AC146394.3| Pan troglodytes BAC clone RP43-55L17 from 7, complete sequence
          Length = 157809

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 77    attcaagcacgcacacatcaggc 99
             ||||||||||||||||| |||||
Sbjct: 79250 attcaagcacgcacacagcaggc 79228

>gb|AC167969.2| Mus musculus BAC clone RP24-446H24 from chromosome 17, complete
             sequence
          Length = 178774

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 44    gacaccgactagccagcac 62
             |||||||||||||||||||
Sbjct: 78613 gacaccgactagccagcac 78595

>gb|AC074263.5| Homo sapiens BAC clone RP11-324M21 from 7, complete sequence
          Length = 65580

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 77    attcaagcacgcacacatcaggc 99
             ||||||||||||||||| |||||
Sbjct: 54044 attcaagcacgcacacagcaggc 54066

>emb|AL356372.10| Human DNA sequence from clone RP11-414H16 on chromosome 1, complete
             sequence
          Length = 79174

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    tatattattcataagtata 33
             |||||||||||||||||||
Sbjct: 30964 tatattattcataagtata 30946

>dbj|AB093144.1| Neocalanus gracilis mitochondrial srRNA, COI, ND4L, lrRNA genes for
            small subunit ribosomal RNA, cytochrome c oxidase subunit
            I, NADH dehydrogenase subunit 4L, large subunit ribosomal
            RNA, complete cds
          Length = 3620

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 15   tatattattcataagtata 33
            |||||||||||||||||||
Sbjct: 3433 tatattattcataagtata 3451

>gb|AY026379.1| Rhabdocalyptus dawsoni 28S large subunit ribosomal RNA gene, partial
            sequence
          Length = 3824

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    ggagcacggcaacgtatat 19
            |||||||||||||||||||
Sbjct: 2150 ggagcacggcaacgtatat 2168

>gb|AC122406.5| Mus musculus BAC clone RP24-126L14 from chromosome 17, complete sequence
          Length = 161377

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 44     gacaccgactagccagcac 62
              |||||||||||||||||||
Sbjct: 147767 gacaccgactagccagcac 147749


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 748,223
Number of Sequences: 3902068
Number of extensions: 748223
Number of successful extensions: 50999
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50950
Number of HSP's gapped (non-prelim): 49
length of query: 139
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 118
effective length of database: 17,151,101,840
effective search space: 2023830017120
effective search space used: 2023830017120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)