| Clone Name | rbaet16e01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U94997.1|CTU94997 Candida tropicalis 2,4-dienoyl-CoA reductase precursor, gene, complete cds Length = 2640 Score = 46.1 bits (23), Expect = 0.065 Identities = 23/23 (100%) Strand = Plus / Plus Query: 253 gttgaagaccctgaccttgaacc 275 ||||||||||||||||||||||| Sbjct: 1660 gttgaagaccctgaccttgaacc 1682
>gb|U94996.1|CTU94996 Candida tropicalis 2,4-dienoyl-CoA reductase precursor, gene, complete cds Length = 2943 Score = 46.1 bits (23), Expect = 0.065 Identities = 23/23 (100%) Strand = Plus / Plus Query: 253 gttgaagaccctgaccttgaacc 275 ||||||||||||||||||||||| Sbjct: 1953 gttgaagaccctgaccttgaacc 1975
>ref|XM_481633.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2289 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 194 gcgttcgcgttcggcgccggca 215 |||||||||||||||||||||| Sbjct: 1807 gcgttcgcgttcggcgccggca 1828
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 194 gcgttcgcgttcggcgccggca 215 |||||||||||||||||||||| Sbjct: 14358721 gcgttcgcgttcggcgccggca 14358742
>dbj|AP004759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0670E08 Length = 133106 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 194 gcgttcgcgttcggcgccggca 215 |||||||||||||||||||||| Sbjct: 3004 gcgttcgcgttcggcgccggca 3025
>dbj|AP003884.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1136_A10 Length = 101249 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 194 gcgttcgcgttcggcgccggca 215 |||||||||||||||||||||| Sbjct: 61801 gcgttcgcgttcggcgccggca 61822
>gb|AY770016.1| Rattus norvegicus clone Shan-2 cytokine target mRNA sequence Length = 1921 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 187 cgcactcgcgttcgcgttcggcgcc 211 |||||||||||||||| |||||||| Sbjct: 1385 cgcactcgcgttcgcgctcggcgcc 1409
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 191 ctcgcgttcgcgttcggcgccggca 215 ||||||||||||| ||||||||||| Sbjct: 4250614 ctcgcgttcgcgtacggcgccggca 4250590 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 tgaccttgaacccgaggtcg 283 |||||||||||||||||||| Sbjct: 2347051 tgaccttgaacccgaggtcg 2347032 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 cggcgccggcaggcggagcg 224 |||||||||||||||||||| Sbjct: 787085 cggcgccggcaggcggagcg 787066
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 tcgcgttcgcgttcggcgccggca 215 ||||||||||||||||||| |||| Sbjct: 1149571 tcgcgttcgcgttcggcgcgggca 1149594
>gb|BT018289.1| Zea mays clone EL01T0205D02.c mRNA sequence Length = 1539 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 gcgccggcaggcggagcgtg 226 |||||||||||||||||||| Sbjct: 331 gcgccggcaggcggagcgtg 312
>gb|AC012417.13| Homo sapiens chromosome 18, clone RP11-408H20, complete sequence Length = 181552 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 caaaatgacaaacacatactacca 64 ||||| |||||||||||||||||| Sbjct: 124831 caaaaagacaaacacatactacca 124854
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cgttcggcgccggcaggcgg 220 |||||||||||||||||||| Sbjct: 8905880 cgttcggcgccggcaggcgg 8905899
>gb|DQ179104.2| Ethanoligenens sp. hit B49 L-lactate dehydrogenase gene, complete cds Length = 1139 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gcatcgtgggcaccggcacc 187 |||||||||||||||||||| Sbjct: 533 gcatcgtgggcaccggcacc 552 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,914,264 Number of Sequences: 3902068 Number of extensions: 1914264 Number of successful extensions: 31943 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 31697 Number of HSP's gapped (non-prelim): 246 length of query: 306 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 284 effective length of database: 17,147,199,772 effective search space: 4869804735248 effective search space used: 4869804735248 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)