>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
           (XEA)
          Length = 1174

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                
Query: 189 ggggactacatggagcactcggcggggacgccctgagcgaaacgcttggggtc 241
           ||||||||||||||||||||||||||||||||||  ||||  |||||||||||
Sbjct: 932 ggggactacatggagcactcggcggggacgcccttggcgacgcgcttggggtc 880



 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 79   atacagacacccccatcttccctat 103
            |||||||| ||||||||||||||||
Sbjct: 1026 atacagacgcccccatcttccctat 1002

>gb|AY023463.1| Oryza sativa microsatellite MRG5788 containing (TCG)X8, closest to
           marker R11, genomic sequence
          Length = 224

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 196 acatggagcactcggcggggacgccctgagcgaaacgcttggggtcggtg 245
           |||||||||||||||||||||||||||| | ||| |||||||| ||||||
Sbjct: 82  acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtg 33

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                  
Query: 196      acatggagcactcggcggggacgccctgagcgaaacgcttggggtcggtg 245
                |||||||||||||||||||||||||||| | ||| |||||||| ||||||
Sbjct: 28773068 acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtg 28773117

>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0028E05
          Length = 157631

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                               
Query: 196   acatggagcactcggcggggacgccctgagcgaaacgcttggggtcggtg 245
             |||||||||||||||||||||||||||| | ||| |||||||| ||||||
Sbjct: 80843 acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtg 80892

>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full
           insert sequence
          Length = 1253

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 196 acatggagcactcggcggggacgccctgagcgaaacgcttggggtcggtg 245
           |||||||||||||||||||||||||||| | ||| |||||||| ||||||
Sbjct: 989 acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtg 940

>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
           (XEB)
          Length = 1226

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 203 gcactcggcggggacgccctgagcgaaacgcttggggtcggtg 245
           |||||||||||| |||||||| || |  |||||||||||||||
Sbjct: 958 gcactcggcgggcacgccctgcgccacccgcttggggtcggtg 916

>gb|AY103891.1| Zea mays PCO065722 mRNA sequence
          Length = 1280

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 203 gcactcggcggggacgccctgagcgaaacgcttggggtcgg 243
           |||||||||||| |||||||| | ||| ||||||| |||||
Sbjct: 995 gcactcggcgggcacgccctgcgggaagcgcttggcgtcgg 955

>gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence
          Length = 781

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 200 ggagcactcggcggggacgccctg 223
           ||||||||||||||||| ||||||
Sbjct: 503 ggagcactcggcggggaagccctg 480

>gb|AC161535.5| Mus musculus chromosome 5, clone RP23-26J13, complete sequence
          Length = 209259

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     actaatcattattgatttcc 69
              ||||||||||||||||||||
Sbjct: 129064 actaatcattattgatttcc 129045

>emb|AL590546.7| Human DNA sequence from clone RP11-402O5 on chromosome 6, complete
             sequence
          Length = 72962

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     gacaaacaagaatttaccac 24
             ||||||||||||||||||||
Sbjct: 53786 gacaaacaagaatttaccac 53805

>gb|AC092733.18| Homo sapiens chromosome 11, clone RP11-193F22, complete sequence
          Length = 195538

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    agacacccccatcttcccta 102
             ||||||||||||||||||||
Sbjct: 74787 agacacccccatcttcccta 74768

>emb|BX324186.12| Zebrafish DNA sequence from clone DKEY-18B8 in linkage group 17, complete
              sequence
          Length = 153540

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    cagtgcaatgctagcagctg 159
              ||||||||||||||||||||
Sbjct: 108572 cagtgcaatgctagcagctg 108591

>gb|AC148685.1| Macaca mulatta Major Histocompatibility Complex BAC MMU188J04, complete
             sequence
          Length = 166821

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   gggactacatggagcactcg 209
             ||||||||||||||||||||
Sbjct: 22059 gggactacatggagcactcg 22040

>dbj|AB113109.1| Aotus trivirgatus Aotr-B1 gene for MHC class I antigen, partial cds
            and promoter region
          Length = 3861

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 186  catggggactacatggagcactcg 209
            |||||||||| |||||||||||||
Sbjct: 2660 catggggactgcatggagcactcg 2683

>gb|AY106262.1| Zea mays PCO111648 mRNA sequence
          Length = 1257

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 200 ggagcactcggcggggacgccctg 223
           ||||||||||||||||| ||||||
Sbjct: 981 ggagcactcggcggggaagccctg 958

>gb|AY103775.1| Zea mays PCO076979 mRNA sequence
          Length = 1495

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 197  catggagcactcggcgggga 216
            ||||||||||||||||||||
Sbjct: 1027 catggagcactcggcgggga 1008


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,810,566
Number of Sequences: 3902068
Number of extensions: 1810566
Number of successful extensions: 25827
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 25797
Number of HSP's gapped (non-prelim): 30
length of query: 245
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 223
effective length of database: 17,147,199,772
effective search space: 3823825549156
effective search space used: 3823825549156
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)