| Clone Name | rbaet16a07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | RPOA_LDVP (Q83017) Replicase polyprotein 1ab (ORF1ab polyprotein... | 28 | 4.5 | 2 | CP21A_PIG (P15540) Cytochrome P450 21 (EC 1.14.99.10) (Cytochrom... | 28 | 5.9 | 3 | TACY_LISIV (P31831) Ivanolysin precursor (Thiol-activated cytoly... | 28 | 5.9 |
|---|
>RPOA_LDVP (Q83017) Replicase polyprotein 1ab (ORF1ab polyprotein) [Includes:| Replicase polyprotein 1a (ORF1a)] [Contains: Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1 Length = 3616 Score = 28.5 bits (62), Expect = 4.5 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -1 Query: 130 NGFLQWSSSNCITTQGLVNCNK 65 NG Q S+ NC+TT GL C++ Sbjct: 2196 NGLQQSSALNCLTTSGLERCSR 2217
>CP21A_PIG (P15540) Cytochrome P450 21 (EC 1.14.99.10) (Cytochrome P450 XXI)| (Steroid 21-hydroxylase) (21-OHase) (P450-C21) (P-450c21) Length = 492 Score = 28.1 bits (61), Expect = 5.9 Identities = 10/21 (47%), Positives = 16/21 (76%) Frame = -2 Query: 273 AGVPLHFGEWMLKSLKLPPII 211 AG L +G+W L++L LPP++ Sbjct: 14 AGARLLWGQWKLRNLHLPPLV 34
>TACY_LISIV (P31831) Ivanolysin precursor (Thiol-activated cytolysin)| Length = 528 Score = 28.1 bits (61), Expect = 5.9 Identities = 8/29 (27%), Positives = 19/29 (65%) Frame = +2 Query: 197 YYSTLIIGGNFKDFNIHSPKCNGTPAQWY 283 + +++ + GN ++ NIH+ +C G +W+ Sbjct: 463 FTTSIYLPGNARNINIHAKECTGLAWEWW 491 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,544,144 Number of Sequences: 219361 Number of extensions: 842453 Number of successful extensions: 1228 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1219 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1228 length of database: 80,573,946 effective HSP length: 77 effective length of database: 63,683,149 effective search space used: 1528395576 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)