>OST2_HUMAN (Q9Y278) Heparan sulfate glucosamine 3-O-sulfotransferase 2 (EC|
           2.8.2.29) (Heparan sulfate D-glucosaminyl
           3-O-sulfotransferase 2) (Heparan sulfate
           3-O-sulfotransferase 2) (h3-OST-2)
          Length = 367

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
 Frame = +1

Query: 73  TNHHGSAHIGLDKFPKVVVIYSEDGRPGSSSPMMKLHPASKGQN*Q----DCR*LRGLDW 240
           +NH GS  +G  + P+ +++  + G   +    +++HP  +    +    D    RGLDW
Sbjct: 101 SNHSGSPKLGTKRLPQALIVGVKKGGTRAVLEFIRVHPDVRALGTEPHFFDRNYGRGLDW 160

>YPB3_ECOLI (P03851) Hypothetical 9.4 kDa protein|
          Length = 84

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 65  TPSRITMARPISALTNFLRWW 127
           T +RI+ AR +   T FL+WW
Sbjct: 35  TGNRISRARYVGGATEFLKWW 55

>RFC2_MOUSE (Q9WUK4) Activator 1 40 kDa subunit (Replication factor C 40 kDa|
           subunit) (A1 40 kDa subunit) (RF-C 40 kDa subunit)
           (RFC40)
          Length = 349

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 48  LPSITTRHHESPWLGPYRP 104
           +PS T  H+E PW+  YRP
Sbjct: 21  VPSKTAGHYELPWVEKYRP 39


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,605,713
Number of Sequences: 219361
Number of extensions: 903930
Number of successful extensions: 1817
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1817
length of database: 80,573,946
effective HSP length: 61
effective length of database: 67,192,925
effective search space used: 1612630200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)