| Clone Name | rbaet14f06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | FANCM_HUMAN (Q8IYD8) Fanconi anemia group M protein (EC 3.6.1.-)... | 28 | 7.9 |
|---|
>FANCM_HUMAN (Q8IYD8) Fanconi anemia group M protein (EC 3.6.1.-) (ATP-dependent| RNA helicase FANCM) (Protein FACM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog) Length = 2048 Score = 27.7 bits (60), Expect = 7.9 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = -2 Query: 229 SSDSSRNFPQPSSRMIDF 176 SSD S NFP+P S++ DF Sbjct: 1467 SSDESENFPKPCSQLEDF 1484 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,402,138 Number of Sequences: 219361 Number of extensions: 526084 Number of successful extensions: 1099 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1091 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1099 length of database: 80,573,946 effective HSP length: 68 effective length of database: 65,657,398 effective search space used: 1575777552 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)