>emb|AJ006296.1|HVU6296 Hordeum vulgare partial mRNA for chlorophyll a/b-binding protein
          Length = 470

 Score =  468 bits (236), Expect = e-129
 Identities = 258/264 (97%), Gaps = 1/264 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gatgtacaagtggatgcatt-gagtcaccattggttcatattttacaaatcaccaagtcc 59
           ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gatgtacaagtggatccatttgagtcaccattggttcatattttacaaatcaccaagtcc 397

                                                                       
Query: 60  cagcagctctccaatgtgatcggaccagcattataatcaacaaaggatctttgcgatacc 119
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cagcagctctcctatgtgatcggaccagcattataatcaacaaaggatctttgcgatacc 337

                                                                       
Query: 120 ctctcatccatcactcgtcatacaaaaccaaagcacgttcgttacacggacgcccgttcg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 336 ctctcatccatcactcgtcatacaaaaccaaagcacgttcgttacacggacgcgcgttcg 277

                                                                       
Query: 180 tccattttgcagctgagctgacagaaactgctcgaccaccgaccacttaagaggagccga 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tccattttgcagctgagctgacagaaactgctcgaccaccgaccacttaagaggagccga 217

                                   
Query: 240 aggtgccgaaaatggtggtgtgca 263
           ||||| |||| |||||||||||||
Sbjct: 216 aggtgtcgaagatggtggtgtgca 193

>gb|AE004471.1| Pseudomonas aeruginosa PAO1, section 32 of 529 of the complete genome
          Length = 12357

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 168   gacgcccgttcgtccattttgc 189
             ||||||||||||||||||||||
Sbjct: 10487 gacgcccgttcgtccattttgc 10466

>emb|Z50801.1|ZMCABCP29 Z.mays mRNA for chlorophyll a/b-binding protein CP29
          Length = 1162

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 30   ttggttcatattttacaaatcaccaagtcccagc 63
            |||| |||||| ||||||| ||||||||||||||
Sbjct: 1104 ttggatcatatattacaaaccaccaagtcccagc 1071

>gb|AY103995.1| Zea mays PCO102677 mRNA sequence
          Length = 1225

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 30   ttggttcatattttacaaatcaccaagtcccagc 63
            |||| |||||| ||||||| ||||||||||||||
Sbjct: 1153 ttggatcatatattacaaaccaccaagtcccagc 1120

>gb|AC003680.3| Arabidopsis thaliana chromosome 2 BAC F17K2 genomic sequence, complete
             sequence
          Length = 91854

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 28    cattggttcatattttacaaa 48
             |||||||||||||||||||||
Sbjct: 52509 cattggttcatattttacaaa 52489

>ref|XM_507368.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA
          Length = 1156

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gatgtacaagtggatgcatt 20
            ||||||||||||||||||||
Sbjct: 1156 gatgtacaagtggatgcatt 1137

>ref|XM_478692.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1152

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gatgtacaagtggatgcatt 20
            ||||||||||||||||||||
Sbjct: 1151 gatgtacaagtggatgcatt 1132

>ref|XM_507367.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA
          Length = 1162

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gatgtacaagtggatgcatt 20
            ||||||||||||||||||||
Sbjct: 1158 gatgtacaagtggatgcatt 1139

>ref|XM_507366.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA
          Length = 1183

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gatgtacaagtggatgcatt 20
            ||||||||||||||||||||
Sbjct: 1158 gatgtacaagtggatgcatt 1139

>ref|XM_506405.2| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA
          Length = 1221

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gatgtacaagtggatgcatt 20
            ||||||||||||||||||||
Sbjct: 1172 gatgtacaagtggatgcatt 1153

>gb|AY313897.1| Danio rerio ion channel NompC (nompc) mRNA, complete cds
          Length = 5533

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 199  gacagaaactgctcgaccaccgac 222
            ||||||||||||| ||||||||||
Sbjct: 4952 gacagaaactgctggaccaccgac 4929

>emb|BX842653.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 8/11
          Length = 347636

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 144    aaaccaaagcacgttcgtta 163
              ||||||||||||||||||||
Sbjct: 227818 aaaccaaagcacgttcgtta 227837

>gb|AC026101.24| Homo sapiens 3 BAC RP11-441D23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164728

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     ttcatattttacaaatcacc 53
              ||||||||||||||||||||
Sbjct: 147265 ttcatattttacaaatcacc 147246

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 1        gatgtacaagtggatgcatt 20
                ||||||||||||||||||||
Sbjct: 22262813 gatgtacaagtggatgcatt 22262832

>ref|NM_204787.1| Gallus gallus proteoglycan (PG-M), mRNA
          Length = 12307

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 187  tgcagctgagctgacagaaactgc 210
            |||||| |||||||||||||||||
Sbjct: 7500 tgcagcagagctgacagaaactgc 7523

>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0567H04
          Length = 181420

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     gatgtacaagtggatgcatt 20
             ||||||||||||||||||||
Sbjct: 68059 gatgtacaagtggatgcatt 68078

>dbj|AK119534.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B02, full
            insert sequence
          Length = 1234

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gatgtacaagtggatgcatt 20
            ||||||||||||||||||||
Sbjct: 1158 gatgtacaagtggatgcatt 1139

>dbj|AK104619.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F11, full
            insert sequence
          Length = 1152

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gatgtacaagtggatgcatt 20
            ||||||||||||||||||||
Sbjct: 1151 gatgtacaagtggatgcatt 1132

>dbj|AK104309.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D03, full
            insert sequence
          Length = 1169

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gatgtacaagtggatgcatt 20
            ||||||||||||||||||||
Sbjct: 1165 gatgtacaagtggatgcatt 1146

>dbj|AK103924.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-C12, full
            insert sequence
          Length = 1183

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gatgtacaagtggatgcatt 20
            ||||||||||||||||||||
Sbjct: 1158 gatgtacaagtggatgcatt 1139

>dbj|AK058293.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F01, full
            insert sequence
          Length = 1221

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gatgtacaagtggatgcatt 20
            ||||||||||||||||||||
Sbjct: 1172 gatgtacaagtggatgcatt 1153

>dbj|AP000805.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-698L23, complete
             sequence
          Length = 180996

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    caccaagtcccagcagctct 69
             ||||||||||||||||||||
Sbjct: 38344 caccaagtcccagcagctct 38325

>ref|NM_183349.1| Danio rerio transient receptor potential cation channel, subfamily N,
            member 1 (trpn1), mRNA
          Length = 5533

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 199  gacagaaactgctcgaccaccgac 222
            ||||||||||||| ||||||||||
Sbjct: 4952 gacagaaactgctggaccaccgac 4929

>gb|AF058796.1|AF058796 Oryza sativa chlorophyll a/b-binding protein (RCABP69) mRNA, complete
            cds
          Length = 1178

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gatgtacaagtggatgcatt 20
            ||||||||||||||||||||
Sbjct: 1156 gatgtacaagtggatgcatt 1137

>dbj|D13542.1|CHKPRGL Chicken mRNA for proteoglycan, complete cds
          Length = 12307

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 187  tgcagctgagctgacagaaactgc 210
            |||||| |||||||||||||||||
Sbjct: 7500 tgcagcagagctgacagaaactgc 7523


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,241,881
Number of Sequences: 3902068
Number of extensions: 2241881
Number of successful extensions: 48235
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48156
Number of HSP's gapped (non-prelim): 78
length of query: 264
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 242
effective length of database: 17,147,199,772
effective search space: 4149622344824
effective search space used: 4149622344824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)