ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet14b08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CP19A_LAGAC (Q69FB6) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromat... 30 1.8
2STFE_ECOLI (P33227) Side tail fiber protein homolog from lambdoi... 29 3.1
3CP19A_SHEEP (Q9XS28) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromat... 28 5.4
4CP19A_CAPHI (Q6YI21) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromat... 28 5.4
5CP19A_BOVIN (P46194) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromat... 28 5.4

>CP19A_LAGAC (Q69FB6) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromatase) (CYPXIX)|
           (Estrogen synthetase) (P-450AROM)
          Length = 503

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 247 LILIWCFPSTQSPPWPALFPPLG--VVKCRALPFTAGKSTCSY 369
           L+L+W +  T S P P  F  +G  +  CR L    G STC+Y
Sbjct: 35  LLLVWNYEDTSSIPGPGYFLGIGPLISHCRFLWMGIG-STCNY 76



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>STFE_ECOLI (P33227) Side tail fiber protein homolog from lambdoid prophage e14|
           (Fragment)
          Length = 166

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 286 PWPALFPPLGVVKCRALPFTA 348
           PWP+  PP G +KC    F+A
Sbjct: 16  PWPSATPPTGWLKCNGAAFSA 36



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>CP19A_SHEEP (Q9XS28) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromatase) (CYPXIX)|
           (Estrogen synthetase) (P-450AROM)
          Length = 503

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 247 LILIWCFPSTQSPPWPALFPPLG--VVKCRALPFTAGKSTCSY 369
           L+L+W +  T S P P+ F  +G  +  CR L    G S C+Y
Sbjct: 35  LLLVWNYEDTSSIPGPSYFLGIGPLISHCRFLWMGIG-SACNY 76



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>CP19A_CAPHI (Q6YI21) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromatase) (CYPXIX)|
           (Estrogen synthetase) (P-450AROM)
          Length = 503

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 247 LILIWCFPSTQSPPWPALFPPLG--VVKCRALPFTAGKSTCSY 369
           L+L+W +  T S P P+ F  +G  +  CR L    G S C+Y
Sbjct: 35  LLLVWNYEDTSSIPGPSYFLGIGPLISHCRFLWMGIG-SACNY 76



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>CP19A_BOVIN (P46194) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromatase) (CYPXIX)|
           (Estrogen synthetase) (P-450AROM)
          Length = 503

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 247 LILIWCFPSTQSPPWPALFPPLG--VVKCRALPFTAGKSTCSY 369
           L+L+W +  T S P P+ F  +G  +  CR L    G S C+Y
Sbjct: 35  LLLVWNYEDTSSIPGPSYFLGIGPLISHCRFLWMGIG-SACNY 76


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,812,124
Number of Sequences: 219361
Number of extensions: 884078
Number of successful extensions: 1929
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1929
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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