>ref|XM_469768.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1724

 Score =  133 bits (67), Expect = 3e-28
 Identities = 103/115 (89%)
 Strand = Plus / Minus

                                                                        
Query: 164  aagacggcaatgaagggcatgagaacggatcctatccaaagcttgccatccttctcctcc 223
            |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| 
Sbjct: 1421 aagacggcaatgaagggcatcagaacggatcctatccagagcttcccatccttctcctca 1362

                                                                   
Query: 224  acctcgcttacggctctcaccacctgccctttagtgtcctccaagatgtcgagca 278
            || || || |||||||| |||||||||||| | || |||||||||||||| ||||
Sbjct: 1361 acttcactaacggctcttaccacctgccctgtggtatcctccaagatgtcaagca 1307

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  133 bits (67), Expect = 3e-28
 Identities = 103/115 (89%)
 Strand = Plus / Plus

                                                                            
Query: 164      aagacggcaatgaagggcatgagaacggatcctatccaaagcttgccatccttctcctcc 223
                |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| 
Sbjct: 30635106 aagacggcaatgaagggcatcagaacggatcctatccagagcttcccatccttctcctca 30635165

                                                                       
Query: 224      acctcgcttacggctctcaccacctgccctttagtgtcctccaagatgtcgagca 278
                || || || |||||||| |||||||||||| | || |||||||||||||| ||||
Sbjct: 30635166 acttcactaacggctcttaccacctgccctgtggtatcctccaagatgtcaagca 30635220

>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete
              sequence
          Length = 157970

 Score =  133 bits (67), Expect = 3e-28
 Identities = 103/115 (89%)
 Strand = Plus / Minus

                                                                          
Query: 164    aagacggcaatgaagggcatgagaacggatcctatccaaagcttgccatccttctcctcc 223
              |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| 
Sbjct: 127286 aagacggcaatgaagggcatcagaacggatcctatccagagcttcccatccttctcctca 127227

                                                                     
Query: 224    acctcgcttacggctctcaccacctgccctttagtgtcctccaagatgtcgagca 278
              || || || |||||||| |||||||||||| | || |||||||||||||| ||||
Sbjct: 127226 acttcactaacggctcttaccacctgccctgtggtatcctccaagatgtcaagca 127172

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  133 bits (67), Expect = 3e-28
 Identities = 103/115 (89%)
 Strand = Plus / Plus

                                                                            
Query: 164      aagacggcaatgaagggcatgagaacggatcctatccaaagcttgccatccttctcctcc 223
                |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| 
Sbjct: 30726528 aagacggcaatgaagggcatcagaacggatcctatccagagcttcccatccttctcctca 30726587

                                                                       
Query: 224      acctcgcttacggctctcaccacctgccctttagtgtcctccaagatgtcgagca 278
                || || || |||||||| |||||||||||| | || |||||||||||||| ||||
Sbjct: 30726588 acttcactaacggctcttaccacctgccctgtggtatcctccaagatgtcaagca 30726642

>dbj|AK111876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046K17, full
            insert sequence
          Length = 1571

 Score =  133 bits (67), Expect = 3e-28
 Identities = 103/115 (89%)
 Strand = Plus / Minus

                                                                        
Query: 164  aagacggcaatgaagggcatgagaacggatcctatccaaagcttgccatccttctcctcc 223
            |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| 
Sbjct: 1361 aagacggcaatgaagggcatcagaacggatcctatccagagcttcccatccttctcctca 1302

                                                                   
Query: 224  acctcgcttacggctctcaccacctgccctttagtgtcctccaagatgtcgagca 278
            || || || |||||||| |||||||||||| | || |||||||||||||| ||||
Sbjct: 1301 acttcactaacggctcttaccacctgccctgtggtatcctccaagatgtcaagca 1247

>dbj|AK099001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102B14, full
            insert sequence
          Length = 1570

 Score =  133 bits (67), Expect = 3e-28
 Identities = 103/115 (89%)
 Strand = Plus / Minus

                                                                        
Query: 164  aagacggcaatgaagggcatgagaacggatcctatccaaagcttgccatccttctcctcc 223
            |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| 
Sbjct: 1374 aagacggcaatgaagggcatcagaacggatcctatccagagcttcccatccttctcctca 1315

                                                                   
Query: 224  acctcgcttacggctctcaccacctgccctttagtgtcctccaagatgtcgagca 278
            || || || |||||||| |||||||||||| | || |||||||||||||| ||||
Sbjct: 1314 acttcactaacggctcttaccacctgccctgtggtatcctccaagatgtcaagca 1260

>gb|BT019097.1| Zea mays clone Contig696.F mRNA sequence
          Length = 969

 Score =  109 bits (55), Expect = 5e-21
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                       
Query: 160 gtcaaagacggcaatgaagggcatgagaacggatcctatccaaagcttgccatccttctc 219
           ||||||||| || ||||| ||||| || ||||| |||||||| ||||| || ||||||||
Sbjct: 767 gtcaaagacagcgatgaacggcatcaggacggaccctatccagagcttcccgtccttctc 708

                                                                      
Query: 220 ctccacctcgcttacggctctcaccacctgccctttagtgtcctccaagatgtcgagca 278
           |||||| ||||| ||||||||||||||||  || || ||||||||||||||||| ||||
Sbjct: 707 ctccacttcgctgacggctctcaccacctcgcccttggtgtcctccaagatgtcaagca 649

>gb|BT018847.1| Zea mays clone EL01N0555B09.d mRNA sequence
          Length = 1568

 Score =  109 bits (55), Expect = 5e-21
 Identities = 103/119 (86%)
 Strand = Plus / Minus

                                                                        
Query: 160  gtcaaagacggcaatgaagggcatgagaacggatcctatccaaagcttgccatccttctc 219
            ||||||||| || ||||| ||||| || ||||| |||||||| ||||| || ||||||||
Sbjct: 1295 gtcaaagacagcgatgaacggcatcaggacggaccctatccagagcttcccgtccttctc 1236

                                                                       
Query: 220  ctccacctcgcttacggctctcaccacctgccctttagtgtcctccaagatgtcgagca 278
            |||||| ||||| ||||||||||||||||  || || ||||||||||||||||| ||||
Sbjct: 1235 ctccacttcgctgacggctctcaccacctcgcccttggtgtcctccaagatgtcaagca 1177

>gb|AY104488.1| Zea mays PCO139959 mRNA sequence
          Length = 1603

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 101/119 (84%)
 Strand = Plus / Minus

                                                                        
Query: 160  gtcaaagacggcaatgaagggcatgagaacggatcctatccaaagcttgccatccttctc 219
            ||||||||| || ||||| ||||| || || || |||||||| ||||| || || |||||
Sbjct: 1343 gtcaaagacagcgatgaacggcatcaggacagaccctatccagagcttcccgtctttctc 1284

                                                                       
Query: 220  ctccacctcgcttacggctctcaccacctgccctttagtgtcctccaagatgtcgagca 278
            |||||| ||||| ||||||||||||||||  || || ||||||||||||||||| ||||
Sbjct: 1283 ctccacttcgctgacggctctcaccacctcgcccttggtgtcctccaagatgtcaagca 1225

>gb|BT013821.1| Lycopersicon esculentum clone 132743F, mRNA sequence
          Length = 1514

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                        
Query: 172  aatgaagggcatgagaacggatcctatccaaagcttgccatccttctcctccacctcgct 231
            |||||| | |||||||||   ||| ||||||||||| |||||| ||||||| ||||||||
Sbjct: 1296 aatgaaagacatgagaacacttcccatccaaagcttcccatccctctcctctacctcgct 1237

                     
Query: 232  tacggctct 240
             || |||||
Sbjct: 1236 gacagctct 1228

>gb|AC171736.1| Lycopersicon esculentum chromosome 11 clone C11HBa0323E19, complete
             sequence
          Length = 141216

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                         
Query: 172   aatgaagggcatgagaacggatcctatccaaagcttgccatccttctcctccacctcgct 231
             |||||| | |||||||||   ||| ||||||||||| |||||| ||||||| ||||||||
Sbjct: 82883 aatgaaagacatgagaacacttcccatccaaagcttcccatccctctcctctacctcgct 82942

                      
Query: 232   tacggctct 240
              || |||||
Sbjct: 82943 gacagctct 82951

>gb|AC022433.5|AC022433 Homo sapiens chromosome 5 clone CTD-3066J14, complete sequence
          Length = 171668

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 97     aagcaatgagtttctaacggca 118
              ||||||||||||||||||||||
Sbjct: 109227 aagcaatgagtttctaacggca 109248

>ref|NM_100720.2| Arabidopsis thaliana strictosidine synthase AT1G08470 mRNA, complete
            cds
          Length = 1431

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 197  atccaaagcttgccatccttctcctccac 225
            ||||||||||| ||||| |||||||||||
Sbjct: 1250 atccaaagcttcccatctttctcctccac 1222

>emb|AL390036.17| Human DNA sequence from clone RP11-356N1 on chromosome 1 Contains the
             3' end of a novel gene, a novel gene, the 3' end of the
             SLC25A24 gene for solute carrier family 25 (mitochondrial
             carrier; phosphate carrier) member 24 and two CpG islands,
             complete sequence
          Length = 183037

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 204   gcttgccatccttctcctcca 224
             |||||||||||||||||||||
Sbjct: 94695 gcttgccatccttctcctcca 94715

>ref|XM_779479.1| PREDICTED: Strongylocentrotus purpuratus similar to chromodomain
            helicase DNA binding protein 5 (LOC579359), partial mRNA
          Length = 6573

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 208  gccatccttctcctccacctc 228
            |||||||||||||||||||||
Sbjct: 5234 gccatccttctcctccacctc 5214

>gb|AY117314.1| Arabidopsis thaliana unknown protein (At1g08470) mRNA, complete cds
          Length = 1204

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 197  atccaaagcttgccatccttctcctccac 225
            ||||||||||| ||||| |||||||||||
Sbjct: 1127 atccaaagcttcccatctttctcctccac 1099

>gb|AY064047.1| Arabidopsis thaliana unknown protein (At1g08470) mRNA, complete cds
          Length = 1365

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 197  atccaaagcttgccatccttctcctccac 225
            ||||||||||| ||||| |||||||||||
Sbjct: 1168 atccaaagcttcccatctttctcctccac 1140

>gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete sequence
          Length = 140624

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 193  tcctatccaaagcttgccatccttctcctccac 225
            ||||||||| || || |||||||||||||||||
Sbjct: 8320 tcctatccagagtttaccatccttctcctccac 8352

>gb|AF419594.1|AF419594 Arabidopsis thaliana At1g08470/T27G7_9 mRNA, complete cds
          Length = 1419

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 197  atccaaagcttgccatccttctcctccac 225
            ||||||||||| ||||| |||||||||||
Sbjct: 1238 atccaaagcttcccatctttctcctccac 1210

>gb|AC150799.4| Medicago truncatula chromosome 2 BAC clone mth2-47j13, complete sequence
          Length = 119159

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 193    tcctatccaaagcttgccatccttctcctccac 225
              ||||||||| || || |||||||||||||||||
Sbjct: 117691 tcctatccagagtttaccatccttctcctccac 117723

>gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana BAC T27G7 from chromosome I,
             complete sequence
          Length = 89479

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 197   atccaaagcttgccatccttctcctccac 225
             ||||||||||| ||||| |||||||||||
Sbjct: 63148 atccaaagcttcccatctttctcctccac 63176

>gb|AC123924.4| Mus musculus BAC clone RP24-292A3 from chromosome 16, complete sequence
          Length = 159639

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    tctaggttgcttccaagact 81
             ||||||||||||||||||||
Sbjct: 74631 tctaggttgcttccaagact 74612

>gb|AC122470.3| Mus musculus BAC clone RP24-320O6 from chromosome 18, complete sequence
          Length = 190916

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     aacatcaagcaactctaggt 68
              ||||||||||||||||||||
Sbjct: 186510 aacatcaagcaactctaggt 186491

>ref|XM_813195.1| Trypanosoma cruzi strain CL Brener hypothetical protein
             (Tc00.1047053509437.30) partial mRNA
          Length = 11016

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   cgtggatttcgtaccttatt 140
             ||||||||||||||||||||
Sbjct: 10718 cgtggatttcgtaccttatt 10737

>gb|AC005165.1| Homo sapiens BAC clone CTA-242H14 from 7, complete sequence
          Length = 155164

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     taaatgtcagtgagttacag 27
             ||||||||||||||||||||
Sbjct: 20446 taaatgtcagtgagttacag 20427

>gb|AC146016.2| Pan troglodytes BAC clone RP43-131D21 from 7, complete sequence
          Length = 169393

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     taaatgtcagtgagttacag 27
             ||||||||||||||||||||
Sbjct: 73104 taaatgtcagtgagttacag 73085

>emb|AL731556.11| Human DNA sequence from clone RP11-428P16 on chromosome 10 Contains the
             5' end of the KCNMA1 gene for potassium large conductance
             calcium-activated channel subfamily M alpha member 1, a
             novel zinc finger pseudogene (KIAA1629) and two CpG
             islands, complete sequence
          Length = 203003

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   ccatccttctcctccacctc 228
             ||||||||||||||||||||
Sbjct: 77251 ccatccttctcctccacctc 77232

>dbj|AK098326.1| Homo sapiens cDNA FLJ41007 fis, clone UTERU2017810
          Length = 2574

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  ccatccttctcctccacctc 228
            ||||||||||||||||||||
Sbjct: 1119 ccatccttctcctccacctc 1138

>gb|AC161372.2| Mus musculus BAC clone RP23-326G14 from chromosome 16, complete
             sequence
          Length = 208994

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    tctaggttgcttccaagact 81
             ||||||||||||||||||||
Sbjct: 10422 tctaggttgcttccaagact 10441

>gb|AC151578.1| Mus musculus BAC clone RP23-218K4 from 18, complete sequence
          Length = 192387

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    aacatcaagcaactctaggt 68
             ||||||||||||||||||||
Sbjct: 73802 aacatcaagcaactctaggt 73821

>emb|AJ001217.1|HSCGG10P5 Homo sapiens DNA for (CGG)n trinucleotide repeat region, isolate P5-5
            (Chr.10)
          Length = 5365

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 209  ccatccttctcctccacctc 228
            ||||||||||||||||||||
Sbjct: 1488 ccatccttctcctccacctc 1469


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,345,971
Number of Sequences: 3902068
Number of extensions: 2345971
Number of successful extensions: 42546
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42473
Number of HSP's gapped (non-prelim): 73
length of query: 278
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 256
effective length of database: 17,147,199,772
effective search space: 4389683141632
effective search space used: 4389683141632
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)