ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet13d09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 153 bits (77), Expect = 6e-34 Identities = 140/161 (86%) Strand = Plus / Minus Query: 309 gatgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcag 368 ||||||||||||||| ||| |||| || || ||||||||||| |||| |||||||| | Sbjct: 20843722 gatgtacatctccaccgggtagtacaccgtcagcggccagaacccgacggcgccgaggaa 20843663 Query: 369 cccgaggatgtcgttgaagaagggcagcgagatggcgagcaccgtgctcacgatcacgaa 428 || |||||||||||||||||||||| | |||||||||||||||||| |||| |||||| Sbjct: 20843662 gcccaggatgtcgttgaagaagggcatcacgatggcgagcaccgtgctgacgaccacgaa 20843603 Query: 429 cgccgtcctccacaccagcctgaacatgttgaggctgaacg 469 |||||||| |||| ||||||||||||||||| |||||||| Sbjct: 20843602 cgccgtccgccacgtcagcctgaacatgttgacgctgaacg 20843562 Score = 101 bits (51), Expect = 2e-18 Identities = 114/135 (84%) Strand = Plus / Plus Query: 260 tctgcagcgccacccacttcctggagtacttcttcatcttgctctgcgagatgtacatct 319 ||||||||||||||||| || |||| || ||| || ||| | | || ||||||||||| Sbjct: 6693504 tctgcagcgccacccacctcttggacgacctctccagcttccgccgccggatgtacatct 6693563 Query: 320 ccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagcccgaggatgt 379 ||||||||||||| ||||||||||||||||| |||| |||||||| || ||||| | || Sbjct: 6693564 ccacggggaagtacacggtgagcggccagaacccgacggcgccgaggaggccgagcacgt 6693623 Query: 380 cgttgaagaagggca 394 |||||||||| |||| Sbjct: 6693624 cgttgaagaacggca 6693638 Score = 77.8 bits (39), Expect = 3e-11 Identities = 122/147 (82%), Gaps = 2/147 (1%) Strand = Plus / Minus Query: 309 gatgtacatctccacggggaagtagacggtgagcggccagaagccga-gcgcgccgagca 367 |||||||||||| ||||||||| ||||||||||||||||||| ||| || | || || | Sbjct: 20865662 gatgtacatctcgacggggaagaagacggtgagcggccagaacgcgatgctc-cccagga 20865604 Query: 368 gcccgaggatgtcgttgaagaagggcagcgagatggcgagcaccgtgctcacgatcacga 427 || |||||| |||||||||||||| | |||||| |||| |||| |||| ||||| Sbjct: 20865603 ttcccaggatgctgttgaagaagggcatcaggatggccagcagcgtgatcaccgccacga 20865544 Query: 428 acgccgtcctccacaccagcctgaaca 454 |||||||||||||||| |||| ||||| Sbjct: 20865543 acgccgtcctccacacaagccggaaca 20865517 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Minus Query: 161 tggtcttgaacggcacatagttcttgagcgactgggtgatgccctggatggaggcgacgg 220 |||||||||| ||||| ||| |||||||||| | | || |||||||||||||||| || Sbjct: 20865810 tggtcttgaagggcacgtaggtcttgagcgagtcgaggacgccctggatggaggcggcgc 20865751 Query: 221 tgacggccaccgtgaccgcgaagcaggcgaagctcagggtctgcagcgccacccactt 278 | |||| || ||||| ||||||| ||| ||||||| ||||||||||||||||||| Sbjct: 20865750 aggcggcgacggtgacgaggaagcagacgaggctcaggctctgcagcgccacccactt 20865693 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 153 tcacaacttggtcttgaacggcacatagttcttgagcgactgggtgatgccctggatgga 212 |||| ||||||||||||| || || |||| ||||||||||| | ||| ||||| |||||| Sbjct: 20843878 tcacgacttggtcttgaaggggacgtagtgcttgagcgactcgctgacgccctcgatgga 20843819 Query: 213 ggcgacgg 220 |||||||| Sbjct: 20843818 ggcgacgg 20843811 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 325 gggaagtagacggtgagcggccagaagccgagcgcg 360 |||| |||||||| |||||||||||| ||||||||| Sbjct: 6702231 gggaggtagacggcgagcggccagaacccgagcgcg 6702266
>dbj|AP003613.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0458E11 Length = 148798 Score = 153 bits (77), Expect = 6e-34 Identities = 140/161 (86%) Strand = Plus / Minus Query: 309 gatgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcag 368 ||||||||||||||| ||| |||| || || ||||||||||| |||| |||||||| | Sbjct: 98397 gatgtacatctccaccgggtagtacaccgtcagcggccagaacccgacggcgccgaggaa 98338 Query: 369 cccgaggatgtcgttgaagaagggcagcgagatggcgagcaccgtgctcacgatcacgaa 428 || |||||||||||||||||||||| | |||||||||||||||||| |||| |||||| Sbjct: 98337 gcccaggatgtcgttgaagaagggcatcacgatggcgagcaccgtgctgacgaccacgaa 98278 Query: 429 cgccgtcctccacaccagcctgaacatgttgaggctgaacg 469 |||||||| |||| ||||||||||||||||| |||||||| Sbjct: 98277 cgccgtccgccacgtcagcctgaacatgttgacgctgaacg 98237 Score = 77.8 bits (39), Expect = 3e-11 Identities = 122/147 (82%), Gaps = 2/147 (1%) Strand = Plus / Minus Query: 309 gatgtacatctccacggggaagtagacggtgagcggccagaagccga-gcgcgccgagca 367 |||||||||||| ||||||||| ||||||||||||||||||| ||| || | || || | Sbjct: 120337 gatgtacatctcgacggggaagaagacggtgagcggccagaacgcgatgctc-cccagga 120279 Query: 368 gcccgaggatgtcgttgaagaagggcagcgagatggcgagcaccgtgctcacgatcacga 427 || |||||| |||||||||||||| | |||||| |||| |||| |||| ||||| Sbjct: 120278 ttcccaggatgctgttgaagaagggcatcaggatggccagcagcgtgatcaccgccacga 120219 Query: 428 acgccgtcctccacaccagcctgaaca 454 |||||||||||||||| |||| ||||| Sbjct: 120218 acgccgtcctccacacaagccggaaca 120192 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Minus Query: 161 tggtcttgaacggcacatagttcttgagcgactgggtgatgccctggatggaggcgacgg 220 |||||||||| ||||| ||| |||||||||| | | || |||||||||||||||| || Sbjct: 120485 tggtcttgaagggcacgtaggtcttgagcgagtcgaggacgccctggatggaggcggcgc 120426 Query: 221 tgacggccaccgtgaccgcgaagcaggcgaagctcagggtctgcagcgccacccactt 278 | |||| || ||||| ||||||| ||| ||||||| ||||||||||||||||||| Sbjct: 120425 aggcggcgacggtgacgaggaagcagacgaggctcaggctctgcagcgccacccactt 120368 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 153 tcacaacttggtcttgaacggcacatagttcttgagcgactgggtgatgccctggatgga 212 |||| ||||||||||||| || || |||| ||||||||||| | ||| ||||| |||||| Sbjct: 98553 tcacgacttggtcttgaaggggacgtagtgcttgagcgactcgctgacgccctcgatgga 98494 Query: 213 ggcgacgg 220 |||||||| Sbjct: 98493 ggcgacgg 98486
>dbj|AK102763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D14, full insert sequence Length = 1890 Score = 153 bits (77), Expect = 6e-34 Identities = 140/161 (86%) Strand = Plus / Minus Query: 309 gatgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcag 368 ||||||||||||||| ||| |||| || || ||||||||||| |||| |||||||| | Sbjct: 1398 gatgtacatctccaccgggtagtacaccgtcagcggccagaacccgacggcgccgaggaa 1339 Query: 369 cccgaggatgtcgttgaagaagggcagcgagatggcgagcaccgtgctcacgatcacgaa 428 || |||||||||||||||||||||| | |||||||||||||||||| |||| |||||| Sbjct: 1338 gcccaggatgtcgttgaagaagggcatcacgatggcgagcaccgtgctgacgaccacgaa 1279 Query: 429 cgccgtcctccacaccagcctgaacatgttgaggctgaacg 469 |||||||| |||| ||||||||||||||||| |||||||| Sbjct: 1278 cgccgtccgccacgtcagcctgaacatgttgacgctgaacg 1238 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 153 tcacaacttggtcttgaacggcacatagttcttgagcgactgggtgatgccctggatgga 212 |||| ||||||||||||| || || |||| ||||||||||| | ||| ||||| |||||| Sbjct: 1554 tcacgacttggtcttgaaggggacgtagtgcttgagcgactcgctgacgccctcgatgga 1495 Query: 213 ggcgacgg 220 |||||||| Sbjct: 1494 ggcgacgg 1487
>dbj|AK058304.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H01, full insert sequence Length = 1823 Score = 153 bits (77), Expect = 6e-34 Identities = 140/161 (86%) Strand = Plus / Minus Query: 309 gatgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcag 368 ||||||||||||||| ||| |||| || || ||||||||||| |||| |||||||| | Sbjct: 1395 gatgtacatctccaccgggtagtacaccgtcagcggccagaacccgacggcgccgaggaa 1336 Query: 369 cccgaggatgtcgttgaagaagggcagcgagatggcgagcaccgtgctcacgatcacgaa 428 || |||||||||||||||||||||| | |||||||||||||||||| |||| |||||| Sbjct: 1335 gcccaggatgtcgttgaagaagggcatcacgatggcgagcaccgtgctgacgaccacgaa 1276 Query: 429 cgccgtcctccacaccagcctgaacatgttgaggctgaacg 469 |||||||| |||| ||||||||||||||||| |||||||| Sbjct: 1275 cgccgtccgccacgtcagcctgaacatgttgacgctgaacg 1235 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 153 tcacaacttggtcttgaacggcacatagttcttgagcgactgggtgatgccctggatgga 212 |||| ||||||||||||| || || |||| ||||||||||| | ||| ||||| |||||| Sbjct: 1551 tcacgacttggtcttgaaggggacgtagtgcttgagcgactcgctgacgccctcgatgga 1492 Query: 213 ggcgacgg 220 |||||||| Sbjct: 1491 ggcgacgg 1484
>ref|XM_463528.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1467 Score = 113 bits (57), Expect = 5e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 312 gtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagccc 371 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| | || Sbjct: 1311 gtacatctccacggggaagtagacggtgagcggccagaatccgagcgcgccgaggaagcc 1252 Query: 372 gaggatgtcgttgaagaagggcagc 396 || | ||||||||||||||||||| Sbjct: 1251 gaccacgtcgttgaagaagggcagc 1227
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 113 bits (57), Expect = 5e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 312 gtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagccc 371 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| | || Sbjct: 38304233 gtacatctccacggggaagtagacggtgagcggccagaatccgagcgcgccgaggaagcc 38304292 Query: 372 gaggatgtcgttgaagaagggcagc 396 || | ||||||||||||||||||| Sbjct: 38304293 gaccacgtcgttgaagaagggcagc 38304317 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 325 gggaagtagacggtgagcggccagaagccgagcgcgccgagcagcccgaggatgtcgttg 384 |||||||| || |||||||||||||| ||| ||||||||||||||||| | | ||||| Sbjct: 38127186 gggaagtacaccgtgagcggccagaacgcgacggcgccgagcagcccgagcacggcgttg 38127245 Query: 385 aagaagggcagc 396 ||||| |||||| Sbjct: 38127246 aagaacggcagc 38127257 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ctgcagcgccacccacttcc 280 |||||||||||||||||||| Sbjct: 38127122 ctgcagcgccacccacttcc 38127141
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 113 bits (57), Expect = 5e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 312 gtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagccc 371 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| | || Sbjct: 65058 gtacatctccacggggaagtagacggtgagcggccagaatccgagcgcgccgaggaagcc 65117 Query: 372 gaggatgtcgttgaagaagggcagc 396 || | ||||||||||||||||||| Sbjct: 65118 gaccacgtcgttgaagaagggcagc 65142
>dbj|AK059325.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-A01, full insert sequence Length = 1858 Score = 113 bits (57), Expect = 5e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 312 gtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagccc 371 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| | || Sbjct: 1471 gtacatctccacggggaagtagacggtgagcggccagaatccgagcgcgccgaggaagcc 1412 Query: 372 gaggatgtcgttgaagaagggcagc 396 || | ||||||||||||||||||| Sbjct: 1411 gaccacgtcgttgaagaagggcagc 1387
>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0425F05 Length = 162858 Score = 101 bits (51), Expect = 2e-18 Identities = 114/135 (84%) Strand = Plus / Plus Query: 260 tctgcagcgccacccacttcctggagtacttcttcatcttgctctgcgagatgtacatct 319 ||||||||||||||||| || |||| || ||| || ||| | | || ||||||||||| Sbjct: 127630 tctgcagcgccacccacctcttggacgacctctccagcttccgccgccggatgtacatct 127689 Query: 320 ccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagcccgaggatgt 379 ||||||||||||| ||||||||||||||||| |||| |||||||| || ||||| | || Sbjct: 127690 ccacggggaagtacacggtgagcggccagaacccgacggcgccgaggaggccgagcacgt 127749 Query: 380 cgttgaagaagggca 394 |||||||||| |||| Sbjct: 127750 cgttgaagaacggca 127764 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 325 gggaagtagacggtgagcggccagaagccgagcgcg 360 |||| |||||||| |||||||||||| ||||||||| Sbjct: 136357 gggaggtagacggcgagcggccagaacccgagcgcg 136392
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 101 bits (51), Expect = 2e-18 Identities = 114/135 (84%) Strand = Plus / Plus Query: 260 tctgcagcgccacccacttcctggagtacttcttcatcttgctctgcgagatgtacatct 319 ||||||||||||||||| || |||| || ||| || ||| | | || ||||||||||| Sbjct: 23183 tctgcagcgccacccacctcttggacgacctctccagcttccgccgccggatgtacatct 23242 Query: 320 ccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagcccgaggatgt 379 ||||||||||||| ||||||||||||||||| |||| |||||||| || ||||| | || Sbjct: 23243 ccacggggaagtacacggtgagcggccagaacccgacggcgccgaggaggccgagcacgt 23302 Query: 380 cgttgaagaagggca 394 |||||||||| |||| Sbjct: 23303 cgttgaagaacggca 23317 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 325 gggaagtagacggtgagcggccagaagccgagcgcg 360 |||| |||||||| |||||||||||| ||||||||| Sbjct: 31910 gggaggtagacggcgagcggccagaacccgagcgcg 31945
>dbj|AK106762.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-E07, full insert sequence Length = 1726 Score = 101 bits (51), Expect = 2e-18 Identities = 114/135 (84%) Strand = Plus / Minus Query: 260 tctgcagcgccacccacttcctggagtacttcttcatcttgctctgcgagatgtacatct 319 ||||||||||||||||| || |||| || ||| || ||| | | || ||||||||||| Sbjct: 1476 tctgcagcgccacccacctcttggacgacctctccagcttccgccgccggatgtacatct 1417 Query: 320 ccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagcccgaggatgt 379 ||||||||||||| ||||||||||||||||| |||| |||||||| || ||||| | || Sbjct: 1416 ccacggggaagtacacggtgagcggccagaacccgacggcgccgaggaggccgagcacgt 1357 Query: 380 cgttgaagaagggca 394 |||||||||| |||| Sbjct: 1356 cgttgaagaacggca 1342
>ref|XM_463785.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1814 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 309 gatgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcag 368 |||||||||||| |||||||||||||||||||||||||||||||||||||| || || | Sbjct: 1503 gatgtacatctcgacggggaagtagacggtgagcggccagaagccgagcgcccccaggat 1444 Query: 369 cccgaggatgtcgttgaagaagggcagc 396 || | | ||||||||||||||||||| Sbjct: 1443 gcccaccacgtcgttgaagaagggcagc 1416
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 309 gatgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcag 368 |||||||||||| |||||||||||||||||||||||||||||||||||||| || || | Sbjct: 121373 gatgtacatctcgacggggaagtagacggtgagcggccagaagccgagcgcccccaggat 121314 Query: 369 cccgaggatgtcgttgaagaagggcagc 396 || | | ||||||||||||||||||| Sbjct: 121313 gcccaccacgtcgttgaagaagggcagc 121286 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 312 gtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagccc 371 ||||||||| |||||||||| || || |||||||||||| || |||||||||||||| Sbjct: 30016281 gtacatctcgacggggaagtggatggacagcggccagaaggtgaaggcgccgagcagccc 30016222 Query: 372 ga 373 || Sbjct: 30016221 ga 30016220
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 309 gatgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcag 368 |||||||||||| |||||||||||||||||||||||||||||||||||||| || || | Sbjct: 115982 gatgtacatctcgacggggaagtagacggtgagcggccagaagccgagcgcccccaggat 115923 Query: 369 cccgaggatgtcgttgaagaagggcagc 396 || | | ||||||||||||||||||| Sbjct: 115922 gcccaccacgtcgttgaagaagggcagc 115895
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 309 gatgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcag 368 |||||||||||| |||||||||||||||||||||||||||||||||||||| || || | Sbjct: 70400 gatgtacatctcgacggggaagtagacggtgagcggccagaagccgagcgcccccaggat 70341 Query: 369 cccgaggatgtcgttgaagaagggcagc 396 || | | ||||||||||||||||||| Sbjct: 70340 gcccaccacgtcgttgaagaagggcagc 70313
>dbj|AK060685.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G03, full insert sequence Length = 1835 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 309 gatgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcag 368 |||||||||||| |||||||||||||||||||||||||||||||||||||| || || | Sbjct: 1524 gatgtacatctcgacggggaagtagacggtgagcggccagaagccgagcgcccccaggat 1465 Query: 369 cccgaggatgtcgttgaagaagggcagc 396 || | | ||||||||||||||||||| Sbjct: 1464 gcccaccacgtcgttgaagaagggcagc 1437
>ref|XM_472988.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1467 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaa 350 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1317 ctgcgcgatgtacatctccacggggaagtagacggtgagcggccagaa 1270
>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02, complete sequence Length = 125650 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 309 gatgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcag 368 ||||||||||||||| |||||||||||||||||||||||||| || | ||||||||| | Sbjct: 58551 gatgtacatctccaccgggaagtagacggtgagcggccagaaccccaccgcgccgaggaa 58492 Query: 369 cccgaggatgtcgttgaagaagggcagc 396 ||| | | |||||||||||| |||||| Sbjct: 58491 ccccaccacgtcgttgaagaacggcagc 58464
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaa 350 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 70972 ctgcgcgatgtacatctccacggggaagtagacggtgagcggccagaa 70925
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaa 350 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 24511341 ctgcgcgatgtacatctccacggggaagtagacggtgagcggccagaa 24511294 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 312 gtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagccc 371 ||||||||||||||||||||||| || ||||||||||||| ||| |||||||||||| | Sbjct: 23488625 gtacatctccacggggaagtagatggcgagcggccagaagttgagggcgccgagcagcgc 23488684 Query: 372 gaggatgtcgttgaagaaggg 392 ||| | ||||||||| |||| Sbjct: 23488685 gagcacctcgttgaagtaggg 23488705 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 312 gtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagca 367 ||||||||| ||||||| ||||| || |||||||||||| ||||||||||||||| Sbjct: 33697710 gtacatctcgacggggaggtagatggcgagcggccagaacacgagcgcgccgagca 33697655
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 309 gatgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcag 368 ||||||||||||||| |||||||||||||||||||||||||| || | ||||||||| | Sbjct: 20636511 gatgtacatctccaccgggaagtagacggtgagcggccagaaccccaccgcgccgaggaa 20636452 Query: 369 cccgaggatgtcgttgaagaagggcagc 396 ||| | | |||||||||||| |||||| Sbjct: 20636451 ccccaccacgtcgttgaagaacggcagc 20636424
>dbj|AK065891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044D15, full insert sequence Length = 1975 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 309 gatgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcag 368 ||||||||||||||| |||||||||||||||||||||||||| || | ||||||||| | Sbjct: 1449 gatgtacatctccaccgggaagtagacggtgagcggccagaaccccaccgcgccgaggaa 1390 Query: 369 cccgaggatgtcgttgaagaagggcagc 396 ||| | | |||||||||||| |||||| Sbjct: 1389 ccccaccacgtcgttgaagaacggcagc 1362
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaa 350 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104663 ctgcgcgatgtacatctccacggggaagtagacggtgagcggccagaa 104616
>ref|XM_476538.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1708 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 310 atgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagc 369 |||||||||| |||||||||||||||||||||||||||||| || ||||||| || Sbjct: 1399 atgtacatctggacggggaagtagacggtgagcggccagaaggagacggcgccgatgagg 1340 Query: 370 ccgaggatgtcgttgaagaaggg 392 ||||||| ||||||||||||||| Sbjct: 1339 ccgaggaagtcgttgaagaaggg 1317
>ref|XM_476539.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1775 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 310 atgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagc 369 |||||||||| |||||||||||||||||||||||||||||| || ||||||| || Sbjct: 1274 atgtacatctggacggggaagtagacggtgagcggccagaaggagacggcgccgatgagg 1215 Query: 370 ccgaggatgtcgttgaagaaggg 392 ||||||| ||||||||||||||| Sbjct: 1214 ccgaggaagtcgttgaagaaggg 1192
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 310 atgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagc 369 |||||||||| |||||||||||||||||||||||||||||| || ||||||| || Sbjct: 1821497 atgtacatctggacggggaagtagacggtgagcggccagaaggagacggcgccgatgagg 1821556 Query: 370 ccgaggatgtcgttgaagaaggg 392 ||||||| ||||||||||||||| Sbjct: 1821557 ccgaggaagtcgttgaagaaggg 1821579
>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0507H12 Length = 143030 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 310 atgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagc 369 |||||||||| |||||||||||||||||||||||||||||| || ||||||| || Sbjct: 26076 atgtacatctggacggggaagtagacggtgagcggccagaaggagacggcgccgatgagg 26135 Query: 370 ccgaggatgtcgttgaagaaggg 392 ||||||| ||||||||||||||| Sbjct: 26136 ccgaggaagtcgttgaagaaggg 26158
>dbj|AP003742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_D07 Length = 131449 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 310 atgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagc 369 |||||||||| |||||||||||||||||||||||||||||| || ||||||| || Sbjct: 73716 atgtacatctggacggggaagtagacggtgagcggccagaaggagacggcgccgatgagg 73775 Query: 370 ccgaggatgtcgttgaagaaggg 392 ||||||| ||||||||||||||| Sbjct: 73776 ccgaggaagtcgttgaagaaggg 73798
>dbj|AK120257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046A03, full insert sequence Length = 1870 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 310 atgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagc 369 |||||||||| |||||||||||||||||||||||||||||| || ||||||| || Sbjct: 1401 atgtacatctggacggggaagtagacggtgagcggccagaaggagacggcgccgatgagg 1342 Query: 370 ccgaggatgtcgttgaagaaggg 392 ||||||| ||||||||||||||| Sbjct: 1341 ccgaggaagtcgttgaagaaggg 1319
>dbj|AK106110.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D09, full insert sequence Length = 1708 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 310 atgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagc 369 |||||||||| |||||||||||||||||||||||||||||| || ||||||| || Sbjct: 1399 atgtacatctggacggggaagtagacggtgagcggccagaaggagacggcgccgatgagg 1340 Query: 370 ccgaggatgtcgttgaagaaggg 392 ||||||| ||||||||||||||| Sbjct: 1339 ccgaggaagtcgttgaagaaggg 1317
>dbj|AK103862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149D13, full insert sequence Length = 1774 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 310 atgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagc 369 |||||||||| |||||||||||||||||||||||||||||| || ||||||| || Sbjct: 1273 atgtacatctggacggggaagtagacggtgagcggccagaaggagacggcgccgatgagg 1214 Query: 370 ccgaggatgtcgttgaagaaggg 392 ||||||| ||||||||||||||| Sbjct: 1213 ccgaggaagtcgttgaagaaggg 1191
>dbj|AK058572.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-E09, full insert sequence Length = 714 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 310 atgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagc 369 |||||||||| |||||||||||||||||||||||||||||| || ||||||| || Sbjct: 420 atgtacatctggacggggaagtagacggtgagcggccagaaggagacggcgccgatgagg 361 Query: 370 ccgaggatgtcgttgaagaaggg 392 ||||||| ||||||||||||||| Sbjct: 360 ccgaggaagtcgttgaagaaggg 338
>ref|XM_472826.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1401 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 312 gtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagccc 371 ||||||||||||||||||||||| || ||||||||||||| ||| |||||||||||| | Sbjct: 1266 gtacatctccacggggaagtagatggcgagcggccagaagttgagggcgccgagcagcgc 1207 Query: 372 gaggatgtcgttgaagaaggg 392 ||| | ||||||||| |||| Sbjct: 1206 gagcacctcgttgaagtaggg 1186
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaag 351 ||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4144065 ctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 4144113 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaag 351 ||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4121516 ctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 4121468 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgcc 362 ||||| ||||||||||||| ||||| |||||||||||||||||||||| || || || Sbjct: 4892290 ctgcgcgatgtacatctccgtggggaggtagacggtgagcggccagaaggagatggcacc 4892349 Query: 363 gagcagcccgaggatgtcgttgaagaagggcagcgagatggcga 406 ||| || |||| |||| || |||||||||||||| ||||||| Sbjct: 4892350 gaggaggccgacgatgacgccgaagaagggcagcgccatggcga 4892393 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 325 gggaagtagacggtgagcggccagaagccgagcgcgccga 364 ||||||||||||| ||||||||||||||||||||| |||| Sbjct: 4883390 gggaagtagacggagagcggccagaagccgagcgccccga 4883351
>dbj|AK106090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B07, full insert sequence Length = 1715 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaag 351 ||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1379 ctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 1331
>dbj|AK105784.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-G09, full insert sequence Length = 1773 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaag 351 ||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1357 ctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 1309
>dbj|AK099164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073O03, full insert sequence Length = 1709 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaag 351 ||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1382 ctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 1334
>dbj|AK071044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081F09, full insert sequence Length = 1809 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 312 gtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagccc 371 ||||||||||||||||||||||| || ||||||||||||| ||| |||||||||||| | Sbjct: 1374 gtacatctccacggggaagtagatggcgagcggccagaagttgagggcgccgagcagcgc 1315 Query: 372 gaggatgtcgttgaagaaggg 392 ||| | ||||||||| |||| Sbjct: 1314 gagcacctcgttgaagtaggg 1294
>dbj|AK061470.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D07, full insert sequence Length = 1797 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaag 351 ||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1359 ctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 1311
>dbj|AK061448.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-E03, full insert sequence Length = 1725 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaag 351 ||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1380 ctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 1332
>dbj|AK061444.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-C11, full insert sequence Length = 1662 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaag 351 ||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1357 ctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 1309
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaag 351 ||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4144052 ctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 4144100 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaag 351 ||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4121503 ctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 4121455 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgcc 362 ||||| ||||||||||||| ||||| |||||||||||||||||||||| || || || Sbjct: 4892272 ctgcgcgatgtacatctccgtggggaggtagacggtgagcggccagaaggagatggcacc 4892331 Query: 363 gagcagcccgaggatgtcgttgaagaagggcagcgagatggcga 406 ||| || |||| |||| || |||||||||||||| ||||||| Sbjct: 4892332 gaggaggccgacgatgacgccgaagaagggcagcgccatggcga 4892375 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 325 gggaagtagacggtgagcggccagaagccgagcgcgccga 364 ||||||||||||| ||||||||||||||||||||| |||| Sbjct: 4883372 gggaagtagacggagagcggccagaagccgagcgccccga 4883333
>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 123469 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaag 351 ||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 86461 ctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 86509 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaag 351 ||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 63912 ctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaag 63864
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 312 gtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagccc 371 ||||||||||||||||||||||| || ||||||||||||| ||| |||||||||||| | Sbjct: 44528 gtacatctccacggggaagtagatggcgagcggccagaagttgagggcgccgagcagcgc 44587 Query: 372 gaggatgtcgttgaagaaggg 392 ||| | ||||||||| |||| Sbjct: 44588 gagcacctcgttgaagtaggg 44608
>gb|AC145322.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0096N19, complete sequence Length = 178671 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaa 350 ||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 60458 ctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaa 60505
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaa 350 ||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 4771216 ctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaa 4771169
>dbj|AK104370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E06, full insert sequence Length = 1707 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaa 350 ||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1402 ctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaa 1355
>dbj|AK068003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129H02, full insert sequence Length = 1781 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaa 350 ||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1389 ctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaa 1342
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaa 350 ||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 4790000 ctgcgcgatgtacatctcgacggggaagtagacggtgagcggccagaa 4789953
>gb|BT009124.1| Triticum aestivum clone wl1n.pk0014.c11:fis, full insert mRNA sequence Length = 1376 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 310 atgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagc 369 |||||||||| | |||||||||||||||||||||||||||| || ||||||| ||| Sbjct: 780 atgtacatctggatggggaagtagacggtgagcggccagaaggagacggcgccgatgagc 721 Query: 370 ccgaggatgtcgttgaagaa 389 || |||| |||||||||||| Sbjct: 720 cccaggaagtcgttgaagaa 701
>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120825 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgcc 362 ||||| ||||||||||||| ||||| |||||||||||||||||||||| || || || Sbjct: 46132 ctgcgcgatgtacatctccgtggggaggtagacggtgagcggccagaaggagatggcacc 46073 Query: 363 gagcagcccgaggatgtcgttgaagaagggcagcgagatggcga 406 ||| || |||| |||| || |||||||||||||| ||||||| Sbjct: 46072 gaggaggccgacgatgacgccgaagaagggcagcgccatggcga 46029 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 325 gggaagtagacggtgagcggccagaagccgagcgcgccga 364 ||||||||||||| ||||||||||||||||||||| |||| Sbjct: 55032 gggaagtagacggagagcggccagaagccgagcgccccga 55071
>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgcc 362 ||||| ||||||||||||| ||||| |||||||||||||||||||||| || || || Sbjct: 67669 ctgcgcgatgtacatctccgtggggaggtagacggtgagcggccagaaggagatggcacc 67610 Query: 363 gagcagcccgaggatgtcgttgaagaagggcagcgagatggcga 406 ||| || |||| |||| || |||||||||||||| ||||||| Sbjct: 67609 gaggaggccgacgatgacgccgaagaagggcagcgccatggcga 67566 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 325 gggaagtagacggtgagcggccagaagccgagcgcgccga 364 ||||||||||||| ||||||||||||||||||||| |||| Sbjct: 76569 gggaagtagacggagagcggccagaagccgagcgccccga 76608
>gb|BT009014.1| Triticum aestivum clone wdk3c.pk006.d6:fis, full insert mRNA sequence Length = 1785 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 309 gatgtacatctccacggggaagtagacggtgagcggccagaa 350 |||||||||||| |||||||||||||||||||| |||||||| Sbjct: 1389 gatgtacatctcgacggggaagtagacggtgagtggccagaa 1348
>gb|AY109232.1| Zea mays PCO115240 mRNA sequence Length = 1756 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 303 ctgcgagatgtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgcc 362 ||||| ||||||||| ||| |||||||| || || |||||||||||| ||| ||||| Sbjct: 1297 ctgcgcgatgtacatggtcaccgggaagtacaccgtcagcggccagaaggcgatggcgcc 1238 Query: 363 gagcagcccgaggatgtcgttgaagaagggcagc 396 ||||||||||| | | ||||||||||||||||| Sbjct: 1237 cagcagcccgagcacggcgttgaagaagggcagc 1204
>ref|XM_474206.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1410 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 312 gtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagca 367 ||||||||| ||||||| ||||| || |||||||||||| ||||||||||||||| Sbjct: 1275 gtacatctcgacggggaggtagatggcgagcggccagaacacgagcgcgccgagca 1220
>ref|NM_190140.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1596 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 325 gggaagtagacggtgagcggccagaagccgagcgcgccgagcagcccgaggatgtcgttg 384 |||||||| || |||||||||||||| ||| ||||||||||||||||| | | ||||| Sbjct: 1424 gggaagtacaccgtgagcggccagaacgcgacggcgccgagcagcccgagcacggcgttg 1365 Query: 385 aagaagggcagc 396 ||||| |||||| Sbjct: 1364 aagaacggcagc 1353 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ctgcagcgccacccacttcc 280 |||||||||||||||||||| Sbjct: 1488 ctgcagcgccacccacttcc 1469
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 312 gtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagca 367 ||||||||| ||||||| ||||| || |||||||||||| ||||||||||||||| Sbjct: 128770 gtacatctcgacggggaggtagatggcgagcggccagaacacgagcgcgccgagca 128715
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 312 gtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagca 367 ||||||||| ||||||| ||||| || |||||||||||| ||||||||||||||| Sbjct: 48153 gtacatctcgacggggaggtagatggcgagcggccagaacacgagcgcgccgagca 48098
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 312 gtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagca 367 ||||||||| ||||||| ||||| || |||||||||||| ||||||||||||||| Sbjct: 128888 gtacatctcgacggggaggtagatggcgagcggccagaacacgagcgcgccgagca 128833
>dbj|AP003261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0471B04 Length = 138025 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 325 gggaagtagacggtgagcggccagaagccgagcgcgccgagcagcccgaggatgtcgttg 384 |||||||| || |||||||||||||| ||| ||||||||||||||||| | | ||||| Sbjct: 95220 gggaagtacaccgtgagcggccagaacgcgacggcgccgagcagcccgagcacggcgttg 95279 Query: 385 aagaagggcagc 396 ||||| |||||| Sbjct: 95280 aagaacggcagc 95291 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ctgcagcgccacccacttcc 280 |||||||||||||||||||| Sbjct: 95156 ctgcagcgccacccacttcc 95175
>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0018C10 Length = 200183 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 325 gggaagtagacggtgagcggccagaagccgagcgcgccgagcagcccgaggatgtcgttg 384 |||||||| || |||||||||||||| ||| ||||||||||||||||| | | ||||| Sbjct: 46420 gggaagtacaccgtgagcggccagaacgcgacggcgccgagcagcccgagcacggcgttg 46479 Query: 385 aagaagggcagc 396 ||||| |||||| Sbjct: 46480 aagaacggcagc 46491 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ctgcagcgccacccacttcc 280 |||||||||||||||||||| Sbjct: 46356 ctgcagcgccacccacttcc 46375
>dbj|AK121636.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051N12, full insert sequence Length = 1756 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 325 gggaagtagacggtgagcggccagaagccgagcgcgccgagcagcccgaggatgtcgttg 384 |||||||| || |||||||||||||| ||| ||||||||||||||||| | | ||||| Sbjct: 1303 gggaagtacaccgtgagcggccagaacgcgacggcgccgagcagcccgagcacggcgttg 1244 Query: 385 aagaagggcagc 396 ||||| |||||| Sbjct: 1243 aagaacggcagc 1232 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ctgcagcgccacccacttcc 280 |||||||||||||||||||| Sbjct: 1367 ctgcagcgccacccacttcc 1348
>dbj|AK119529.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C05, full insert sequence Length = 1598 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 325 gggaagtagacggtgagcggccagaagccgagcgcgccgagcagcccgaggatgtcgttg 384 |||||||| || |||||||||||||| ||| ||||||||||||||||| | | ||||| Sbjct: 1242 gggaagtacaccgtgagcggccagaacgcgacggcgccgagcagcccgagcacggcgttg 1183 Query: 385 aagaagggcagc 396 ||||| |||||| Sbjct: 1182 aagaacggcagc 1171 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ctgcagcgccacccacttcc 280 |||||||||||||||||||| Sbjct: 1306 ctgcagcgccacccacttcc 1287
>dbj|AK069508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020L23, full insert sequence Length = 1819 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 325 gggaagtagacggtgagcggccagaagccgagcgcgccga 364 ||||||||||||| ||||||||||||||||||||| |||| Sbjct: 1324 gggaagtagacggagagcggccagaagccgagcgccccga 1285
>dbj|AK065286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M14, full insert sequence Length = 1618 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 325 gggaagtagacggtgagcggccagaagccgagcgcgccgagcagcccgaggatgtcgttg 384 |||||||| || |||||||||||||| ||| ||||||||||||||||| | | ||||| Sbjct: 1303 gggaagtacaccgtgagcggccagaacgcgacggcgccgagcagcccgagcacggcgttg 1244 Query: 385 aagaagggcagc 396 ||||| |||||| Sbjct: 1243 aagaacggcagc 1232 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ctgcagcgccacccacttcc 280 |||||||||||||||||||| Sbjct: 1367 ctgcagcgccacccacttcc 1348
>ref|XM_467533.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 312 gtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagccc 371 ||||||||| |||||||||| || || |||||||||||| || |||||||||||||| Sbjct: 1226 gtacatctcgacggggaagtggatggacagcggccagaaggtgaaggcgccgagcagccc 1167 Query: 372 ga 373 || Sbjct: 1166 ga 1165
>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654B04 Length = 156907 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 312 gtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagccc 371 ||||||||| |||||||||| || || |||||||||||| || |||||||||||||| Sbjct: 116557 gtacatctcgacggggaagtggatggacagcggccagaaggtgaaggcgccgagcagccc 116498 Query: 372 ga 373 || Sbjct: 116497 ga 116496
>dbj|AK070030.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037N07, full insert sequence Length = 1506 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 312 gtacatctccacggggaagtagacggtgagcggccagaagccgagcgcgccgagcagccc 371 ||||||||| |||||||||| || || |||||||||||| || |||||||||||||| Sbjct: 1226 gtacatctcgacggggaagtggatggacagcggccagaaggtgaaggcgccgagcagccc 1167 Query: 372 ga 373 || Sbjct: 1166 ga 1165
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 341 gcggccagaagccgagcgcgccga 364 |||||||||||||||||||||||| Sbjct: 62166 gcggccagaagccgagcgcgccga 62143 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 350 agccgagcgcgccgagcagcccgagga 376 |||||||||||||||||||| |||||| Sbjct: 1021822 agccgagcgcgccgagcagcgcgagga 1021796
>dbj|AK106814.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-D01, full insert sequence Length = 1749 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Minus Query: 325 gggaagtagacggtgagcggccagaagccgagcgcg 360 |||| |||||||| |||||||||||| ||||||||| Sbjct: 1399 gggaggtagacggcgagcggccagaacccgagcgcg 1364
>dbj|AK071510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095G15, full insert sequence Length = 1150 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Minus Query: 161 tggtcttgaacggcacatagttcttgagcgactgggtgatgccctggatggaggcg 216 |||||||||| ||||| ||| |||||||||| | | || |||||||||||||||| Sbjct: 934 tggtcttgaagggcacgtaggtcttgagcgagtcgaggacgccctggatggaggcg 879
>gb|AF161320.1|AF161320 Pseudomonas aeruginosa NRAMP protein MntH2 (mntH2) gene, complete cds Length = 1560 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 235 accgcgaagcaggcgaagctcagggtctgcagcgccacc 273 |||||||||||||||||| |||| ||| ||| ||||||| Sbjct: 631 accgcgaagcaggcgaagatcagtgtcagcaacgccacc 593
>gb|AE004516.1| Pseudomonas aeruginosa PAO1, section 77 of 529 of the complete genome Length = 10476 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 235 accgcgaagcaggcgaagctcagggtctgcagcgccacc 273 |||||||||||||||||| |||| ||| ||| ||||||| Sbjct: 2471 accgcgaagcaggcgaagatcagtgtcagcaacgccacc 2509
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 aagccgagcgcgccgagcagcc 370 |||||||||||||||||||||| Sbjct: 297360 aagccgagcgcgccgagcagcc 297381
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 aagccgagcgcgccgagcagcc 370 |||||||||||||||||||||| Sbjct: 1029559 aagccgagcgcgccgagcagcc 1029580
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 354 gagcgcgccgagcagcccgagg 375 |||||||||||||||||||||| Sbjct: 2732199 gagcgcgccgagcagcccgagg 2732220 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 agccgagcgcgccgagcagc 369 |||||||||||||||||||| Sbjct: 1132160 agccgagcgcgccgagcagc 1132179
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 aagccgagcgcgccgagcagcc 370 |||||||||||||||||||||| Sbjct: 910571 aagccgagcgcgccgagcagcc 910592
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 cgcgccgagcagcccgaggat 377 ||||||||||||||||||||| Sbjct: 189037 cgcgccgagcagcccgaggat 189017
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 354 gagcgcgccgagcagcccgag 374 ||||||||||||||||||||| Sbjct: 1108537 gagcgcgccgagcagcccgag 1108517 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 gccgagcgcgccgagcagcc 370 |||||||||||||||||||| Sbjct: 347285 gccgagcgcgccgagcagcc 347266
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 354 gagcgcgccgagcagcccgag 374 ||||||||||||||||||||| Sbjct: 2424436 gagcgcgccgagcagcccgag 2424416 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 gccgagcgcgccgagcagcc 370 |||||||||||||||||||| Sbjct: 1666457 gccgagcgcgccgagcagcc 1666438
>emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:3 gene) Length = 2967 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 216 gacggtgacggccaccgtgaccgcg 240 |||||||||||||| |||||||||| Sbjct: 293 gacggtgacggccatcgtgaccgcg 317
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 354 gagcgcgccgagcagcccgag 374 ||||||||||||||||||||| Sbjct: 310055 gagcgcgccgagcagcccgag 310075 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 gccgagcgcgccgagcagcc 370 |||||||||||||||||||| Sbjct: 1116898 gccgagcgcgccgagcagcc 1116879
>gb|AC084549.1|CBRG31K21 Caenorhabditis briggsae cosmid G31K21, complete sequence Length = 25837 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 tttttctcgagaaaaatctta 100 ||||||||||||||||||||| Sbjct: 18971 tttttctcgagaaaaatctta 18991
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 gaagccgagcgcgccgagca 367 |||||||||||||||||||| Sbjct: 3467534 gaagccgagcgcgccgagca 3467515
>gb|AC105982.10| Mus musculus chromosome 15, clone RP24-159I1, complete sequence Length = 168547 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 aaaaatatcaatcacacaga 58 |||||||||||||||||||| Sbjct: 131996 aaaaatatcaatcacacaga 131977
>gb|AC010846.13| Drosophila melanogaster clone BACR13G13, complete sequence Length = 192540 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cccacttcctggagtacttc 291 |||||||||||||||||||| Sbjct: 145692 cccacttcctggagtacttc 145711
>ref|XM_364573.1| Magnaporthe grisea 70-15 hypothetical protein (MG09353.4) partial mRNA Length = 2181 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 214 gcgacggtgacggccaccgtgacc 237 ||||| |||||||||||||||||| Sbjct: 1876 gcgaccgtgacggccaccgtgacc 1899
>gb|AY658678.1| Synthetic construct Peudomonas aeruginosa clone FLH041531.01F PA2185 gene, partial cds Length = 885 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 gccctggatggaggcgacgg 220 |||||||||||||||||||| Sbjct: 727 gccctggatggaggcgacgg 746
>ref|XM_875370.1| PREDICTED: Bos taurus similar to WD repeat domain 10, transcript variant 6 (LOC536731), mRNA Length = 3940 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgagatgtacatctccacgg 325 |||||||||||||||||||| Sbjct: 2171 cgagatgtacatctccacgg 2152
>ref|XM_875299.1| PREDICTED: Bos taurus similar to WD repeat domain 10, transcript variant 5 (LOC536731), mRNA Length = 4114 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgagatgtacatctccacgg 325 |||||||||||||||||||| Sbjct: 2345 cgagatgtacatctccacgg 2326
>ref|XM_875226.1| PREDICTED: Bos taurus similar to WD repeat domain 10, transcript variant 4 (LOC536731), mRNA Length = 3940 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgagatgtacatctccacgg 325 |||||||||||||||||||| Sbjct: 2171 cgagatgtacatctccacgg 2152
>ref|XM_875164.1| PREDICTED: Bos taurus similar to WD repeat domain 10, transcript variant 3 (LOC536731), mRNA Length = 4117 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgagatgtacatctccacgg 325 |||||||||||||||||||| Sbjct: 2345 cgagatgtacatctccacgg 2326
>ref|XM_875087.1| PREDICTED: Bos taurus similar to WD repeat domain 10, transcript variant 2 (LOC536731), mRNA Length = 4102 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgagatgtacatctccacgg 325 |||||||||||||||||||| Sbjct: 2144 cgagatgtacatctccacgg 2125
>ref|XM_616874.2| PREDICTED: Bos taurus similar to WD repeat domain 10, transcript variant 1 (LOC536731), mRNA Length = 3937 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgagatgtacatctccacgg 325 |||||||||||||||||||| Sbjct: 2168 cgagatgtacatctccacgg 2149
>gb|AY380558.1| Burkholderia multivorans E243 type III secretion gene cluster, partial sequence Length = 26962 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 agccgagcgcgccgagcagc 369 |||||||||||||||||||| Sbjct: 2039 agccgagcgcgccgagcagc 2020
>ref|XM_504072.1| Yarrowia lipolytica CLIB122, YALI0E17677g predicted mRNA Length = 1002 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcccaccagattttccacat 32 |||||||||||||||||||| Sbjct: 880 tcccaccagattttccacat 899
>gb|AC134517.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1325D05, complete sequence Length = 136214 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 319 tccacggggaagtagacggtgagcggcc 346 |||||| ||||||||||||||| ||||| Sbjct: 38642 tccacgtggaagtagacggtgaacggcc 38615
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 tccacaccagcctgaacatg 456 |||||||||||||||||||| Sbjct: 1826753 tccacaccagcctgaacatg 1826772
>emb|BX927156.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 9/10 Length = 349115 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 cctccacaccagcctgaaca 454 |||||||||||||||||||| Sbjct: 110036 cctccacaccagcctgaaca 110017
>emb|AL772136.5| Zebrafish DNA sequence from clone CH211-188C22 in linkage group 7 Contains a novel gene similar PLCB (phospholipase C beta), a novel gene similar to PPP1R14B (protein phosphatase 1, regulatory inhibitor subunit 14B) and part of a novel gene similar to BRMS1 (breast cancer metastasis-suppressor 1), complete sequence Length = 147497 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 attcacaacttggtcttgaa 170 |||||||||||||||||||| Sbjct: 111412 attcacaacttggtcttgaa 111431
>gb|AC011029.7| Homo sapiens chromosome 8, clone RP11-202L1, complete sequence Length = 161123 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cagattttccacattcatct 38 |||||||||||||||||||| Sbjct: 17669 cagattttccacattcatct 17688
>gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 genomic sequence, complete sequence Length = 153182 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 attcatctaaaaatatcaat 50 |||||||||||||||||||| Sbjct: 91201 attcatctaaaaatatcaat 91182
>gb|AC115686.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1325D05, complete sequence Length = 169500 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 319 tccacggggaagtagacggtgagcggcc 346 |||||| ||||||||||||||| ||||| Sbjct: 21359 tccacgtggaagtagacggtgaacggcc 21386
>gb|AC153725.3| Medicago truncatula clone mth2-78c5, complete sequence Length = 137377 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 aaaaatcttaaacaaacaca 110 |||||||||||||||||||| Sbjct: 119801 aaaaatcttaaacaaacaca 119820
>emb|BX322794.6| Zebrafish DNA sequence from clone RP71-44B8 in linkage group 23, complete sequence Length = 144572 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 attcacaacttggtcttgaa 170 |||||||||||||||||||| Sbjct: 102517 attcacaacttggtcttgaa 102498
>gb|AY028431.1| Burkholderia cepacia genomovar III putative type III secretion gene cluster, complete sequence Length = 34600 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 agccgagcgcgccgagcagc 369 |||||||||||||||||||| Sbjct: 9248 agccgagcgcgccgagcagc 9229
>ref|NM_132896.1| Drosophila melanogaster CG9981-RA (CG9981), mRNA Length = 3183 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 cccacttcctggagtacttc 291 |||||||||||||||||||| Sbjct: 1379 cccacttcctggagtacttc 1360
>gb|AC073510.7| Homo sapiens chromosome 8, clone RP11-240O2, complete sequence Length = 133085 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cagattttccacattcatct 38 |||||||||||||||||||| Sbjct: 95552 cagattttccacattcatct 95571
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 gaagccgagcgcgccgagca 367 |||||||||||||||||||| Sbjct: 1056043 gaagccgagcgcgccgagca 1056024
>ref|XM_393661.2| PREDICTED: Apis mellifera similar to GA19649-PA (LOC410178), mRNA Length = 5886 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 cggtgagcggccagaagccgagcg 358 ||||||||||| |||||||||||| Sbjct: 2366 cggtgagcggcgagaagccgagcg 2389
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 attcatctaaaaatatcaat 50 |||||||||||||||||||| Sbjct: 17736081 attcatctaaaaatatcaat 17736062 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 319 tccacggggaagtagacggtgagcggcc 346 |||||| ||||||||||||||| ||||| Sbjct: 9167365 tccacgtggaagtagacggtgaacggcc 9167338
>gb|AY166598.1| Burkholderia cepacia genomovar III strain J2315 type III secretion gene cluster, complete sequence Length = 15231 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 agccgagcgcgccgagcagc 369 |||||||||||||||||||| Sbjct: 5061 agccgagcgcgccgagcagc 5042
>gb|AC010920.11|AC010920 Drosophila melanogaster, chromosome X, region 14C-14D, BAC clone BACR47D09, complete sequence Length = 166935 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cccacttcctggagtacttc 291 |||||||||||||||||||| Sbjct: 49738 cccacttcctggagtacttc 49757
>gb|AC009499.4| Homo sapiens BAC clone RP11-510D10 from 2, complete sequence Length = 176570 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 agaaaaatcttaaacaaaca 108 |||||||||||||||||||| Sbjct: 136086 agaaaaatcttaaacaaaca 136105
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 cctccacaccagcctgaaca 454 |||||||||||||||||||| Sbjct: 2930315 cctccacaccagcctgaaca 2930296
>gb|AC009484.3| Homo sapiens BAC clone RP11-313O11 from 2, complete sequence Length = 206074 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 cacttcctggagtacttctt 293 |||||||||||||||||||| Sbjct: 113378 cacttcctggagtacttctt 113397
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 cagcccgaggatgtcgttgaagaa 389 |||||||||||||||| ||||||| Sbjct: 1983381 cagcccgaggatgtcggtgaagaa 1983404
>gb|AE004645.1| Pseudomonas aeruginosa PAO1, section 206 of 529 of the complete genome Length = 11187 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 gccctggatggaggcgacgg 220 |||||||||||||||||||| Sbjct: 6282 gccctggatggaggcgacgg 6301
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 cctggatggaggcgacggtg 222 |||||||||||||||||||| Sbjct: 2691014 cctggatggaggcgacggtg 2691033 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 cgagcgcgccgagcagcccg 372 |||||||||||||||||||| Sbjct: 1460883 cgagcgcgccgagcagcccg 1460864
>gb|AC119935.17| Mus musculus chromosome 15, clone RP24-261L5, complete sequence Length = 163746 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 aaaaatatcaatcacacaga 58 |||||||||||||||||||| Sbjct: 149187 aaaaatatcaatcacacaga 149206
>ref|XM_308874.2| Anopheles gambiae str. PEST ENSANGP00000005723 (ENSANGG00000004352), mRNA Length = 4762 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 gaagaagggcagcgagatgg 403 |||||||||||||||||||| Sbjct: 1282 gaagaagggcagcgagatgg 1301
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 gaagccgagcgcgccgagca 367 |||||||||||||||||||| Sbjct: 1042861 gaagccgagcgcgccgagca 1042880
>emb|BX649591.7| Zebrafish DNA sequence from clone CH211-181H6 in linkage group 20, complete sequence Length = 70838 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cattcacaacttggtcttga 169 |||||||||||||||||||| Sbjct: 4519 cattcacaacttggtcttga 4538
>emb|BX465868.6| Zebrafish DNA sequence from clone DKEY-42I9 in linkage group 22, complete sequence Length = 222195 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 attcacaacttggtcttgaa 170 |||||||||||||||||||| Sbjct: 158132 attcacaacttggtcttgaa 158113
>gb|AE003502.4| Drosophila melanogaster chromosome X, section 54 of 74 of the complete sequence Length = 304712 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cccacttcctggagtacttc 291 |||||||||||||||||||| Sbjct: 69020 cccacttcctggagtacttc 69039
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 attcatctaaaaatatcaat 50 |||||||||||||||||||| Sbjct: 17745334 attcatctaaaaatatcaat 17745315 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 319 tccacggggaagtagacggtgagcggcc 346 |||||| ||||||||||||||| ||||| Sbjct: 9172504 tccacgtggaagtagacggtgaacggcc 9172477
>emb|CR848818.10| Zebrafish DNA sequence from clone DKEY-38O19 in linkage group 16, complete sequence Length = 208738 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cattcacaacttggtcttga 169 |||||||||||||||||||| Sbjct: 41746 cattcacaacttggtcttga 41765
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcccaccagattttccacat 32 |||||||||||||||||||| Sbjct: 2085284 tcccaccagattttccacat 2085303 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,324,376 Number of Sequences: 3902068 Number of extensions: 4324376 Number of successful extensions: 93127 Number of sequences better than 10.0: 128 Number of HSP's better than 10.0 without gapping: 133 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90180 Number of HSP's gapped (non-prelim): 2934 length of query: 473 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 451 effective length of database: 17,147,199,772 effective search space: 7733387097172 effective search space used: 7733387097172 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
