ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet13b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY887063.1| Hordeum vulgare aerobic Mg-protoporphyrin IX mono... 672 0.0
2ref|NM_188121.1| Oryza sativa (japonica cultivar-group), Ozsa855... 198 1e-47
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
4dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
5dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
6dbj|AK069333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
7dbj|AK061646.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
8dbj|AK059435.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
9dbj|AK058287.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
10gb|AY108897.1| Zea mays PCO080076 mRNA sequence 167 4e-38
11ref|NM_115554.2| Arabidopsis thaliana transporter AT3G56950 mRNA... 62 2e-06
12ref|NM_115553.2| Arabidopsis thaliana AT103 (DICARBOXYLATE DIIRO... 62 2e-06
13emb|AL390921.1|ATT8M16 Arabidopsis thaliana DNA chromosome 3, BA... 62 2e-06
14emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome 3, BA... 62 2e-06
15gb|AF236101.1| Arabidopsis thaliana putative dicarboxylate diiro... 62 2e-06
16gb|U38232.1|ATU38232 Arabidopsis thaliana AT103 mRNA, complete cds 62 2e-06
17gb|AF417577.1|AF417577 Euphorbia esula leucine zipper-containing... 54 4e-04
18gb|AY322552.1| Triticum aestivum putative fatty acid desaturase ... 52 0.002
19gb|AC149484.1| Populus trichocarpa clone Pop1-69M19, complete se... 50 0.006
20gb|AC119987.13| Mus musculus chromosome 9, clone RP24-502H5, com... 46 0.096
21gb|AY221168.2| Nicotiana tabacum ZIP mRNA, complete cds 46 0.096
22gb|BT013953.1| Lycopersicon esculentum clone 132976F, mRNA sequence 46 0.096
23gb|AC100506.17| Mus musculus chromosome 9, clone RP23-144D3, com... 46 0.096
24gb|U37437.1|INU37437 Ipomoea nil PNIL34 mRNA, complete cds 44 0.38
25gb|AC102136.6| Mus musculus chromosome 3, clone RP23-269G19, com... 42 1.5
26gb|AC158583.3| Mus musculus chromosome 3, clone RP24-318B11, com... 42 1.5
27gb|AC183833.2| Pan troglodytes BAC clone CH251-141C5 from chromo... 42 1.5
28gb|AC183613.3| Pan troglodytes BAC clone CH251-171F23 from chrom... 42 1.5
29gb|AC093168.3| Homo sapiens BAC clone RP11-148M21 from 7, comple... 42 1.5
30dbj|AP000752.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.5
31gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 42 1.5
32gb|AC099572.12| Mus musculus chromosome 15, clone RP23-16A17, co... 40 5.9
33gb|AC119839.8| Mus musculus chromosome 1, clone RP24-170N13, com... 40 5.9
34gb|AC102333.10| Mus musculus chromosome 18, clone RP24-542P12, c... 40 5.9
35ref|XM_549074.2| PREDICTED: Canis familiaris hypothetical LOC491... 40 5.9
36gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosom... 40 5.9
37ref|XM_381007.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 5.9
38emb|AL109897.30|HSJ134M13 Human DNA sequence from clone RP1-134M... 40 5.9
39emb|AL049551.1|HS271N20 Human DNA sequence from clone RP1-271N20... 40 5.9
40gb|AC161175.5| Mus musculus chromosome 18, clone RP23-2J13, comp... 40 5.9
41gb|AC153138.3| Mus musculus BAC clone RP23-442K7 from chromosome... 40 5.9
42gb|AC154207.3| Mus musculus BAC clone RP24-377E1 from chromosome... 40 5.9
43gb|AC068722.6|AC068722 Homo sapiens chromosome 15 clone CTD-2306... 40 5.9
44dbj|AK111043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
45dbj|AP001825.4| Homo sapiens genomic DNA, chromosome 11q clone:C... 40 5.9
46emb|AL935126.18| Zebrafish DNA sequence from clone CH211-186J3, ... 40 5.9
47dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 5.9
48gb|AC150903.2| Mus musculus BAC clone RP23-35B12 from chromosome... 40 5.9 
>gb|AY887063.1| Hordeum vulgare aerobic Mg-protoporphyrin IX monomethyl ester cyclase
            (Xantha-l) gene, complete cds
          Length = 2097

 Score =  672 bits (339), Expect = 0.0
 Identities = 339/339 (100%)
 Strand = Plus / Minus

                                                                        
Query: 101  caggtgagcacaggaagatgtagatcatgttaattaaccatggaccctgtgctcatttag 160
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2097 caggtgagcacaggaagatgtagatcatgttaattaaccatggaccctgtgctcatttag 2038

                                                                        
Query: 161  agactctcgaggagcatgatgcatcattatgtttgtaaagataggcagagatgaatcctt 220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2037 agactctcgaggagcatgatgcatcattatgtttgtaaagataggcagagatgaatcctt 1978

                                                                        
Query: 221  tttcgacaaattcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagac 280
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1977 tttcgacaaattcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagac 1918

                                                                        
Query: 281  tcgattgggggcatgaggtacgcagcgatgatctcagacactagttgggcaataagagga 340
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1917 tcgattgggggcatgaggtacgcagcgatgatctcagacactagttgggcaataagagga 1858

                                                                        
Query: 341  accctcttcaggttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttc 400
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1857 accctcttcaggttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttc 1798

                                                   
Query: 401  aggttgatatctaccatcctgtctaacttcctcttgaat 439
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 1797 aggttgatatctaccatcctgtctaacttcctcttgaat 1759
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>ref|NM_188121.1| Oryza sativa (japonica cultivar-group), Ozsa8553 predicted mRNA
          Length = 1227

 Score =  198 bits (100), Expect = 1e-47
 Identities = 181/208 (87%)
 Strand = Plus / Minus

                                                                        
Query: 232  tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 291
            |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 1227 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1168

                                                                        
Query: 292  catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 351
            ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 1167 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1108

                                                                        
Query: 352  gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 411
            ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 1107 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 1048

                                        
Query: 412  taccatcctgtctaacttcctcttgaat 439
             |||||||||||||||||||||||||||
Sbjct: 1047 caccatcctgtctaacttcctcttgaat 1020
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  198 bits (100), Expect = 1e-47
 Identities = 181/208 (87%)
 Strand = Plus / Minus

                                                                           
Query: 232     tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 291
               |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 9875240 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 9875181

                                                                           
Query: 292     catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 351
               ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 9875180 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 9875121

                                                                           
Query: 352     gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 411
               ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 9875120 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 9875061

                                           
Query: 412     taccatcctgtctaacttcctcttgaat 439
                |||||||||||||||||||||||||||
Sbjct: 9875060 caccatcctgtctaacttcctcttgaat 9875033



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 54      tgatgcagttcactgccactta 75
               ||||||||||||||||||||||
Sbjct: 9875448 tgatgcagttcactgccactta 9875427
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>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0025D05
          Length = 145684

 Score =  198 bits (100), Expect = 1e-47
 Identities = 181/208 (87%)
 Strand = Plus / Minus

                                                                          
Query: 232    tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 291
              |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 139490 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 139431

                                                                          
Query: 292    catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 351
              ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 139430 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 139371

                                                                          
Query: 352    gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 411
              ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 139370 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 139311

                                          
Query: 412    taccatcctgtctaacttcctcttgaat 439
               |||||||||||||||||||||||||||
Sbjct: 139310 caccatcctgtctaacttcctcttgaat 139283



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 54     tgatgcagttcactgccactta 75
              ||||||||||||||||||||||
Sbjct: 139698 tgatgcagttcactgccactta 139677
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>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0003H10
          Length = 142418

 Score =  198 bits (100), Expect = 1e-47
 Identities = 181/208 (87%)
 Strand = Plus / Minus

                                                                         
Query: 232   tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 291
             |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 11006 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 10947

                                                                         
Query: 292   catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 351
             ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 10946 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 10887

                                                                         
Query: 352   gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 411
             ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 10886 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 10827

                                         
Query: 412   taccatcctgtctaacttcctcttgaat 439
              |||||||||||||||||||||||||||
Sbjct: 10826 caccatcctgtctaacttcctcttgaat 10799



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 54    tgatgcagttcactgccactta 75
             ||||||||||||||||||||||
Sbjct: 11214 tgatgcagttcactgccactta 11193
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>dbj|AK069333.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014B03, full
            insert sequence
          Length = 1691

 Score =  198 bits (100), Expect = 1e-47
 Identities = 181/208 (87%)
 Strand = Plus / Minus

                                                                        
Query: 232  tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 291
            |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 1275 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1216

                                                                        
Query: 292  catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 351
            ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 1215 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1156

                                                                        
Query: 352  gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 411
            ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 1155 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 1096

                                        
Query: 412  taccatcctgtctaacttcctcttgaat 439
             |||||||||||||||||||||||||||
Sbjct: 1095 caccatcctgtctaacttcctcttgaat 1068



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 54   tgatgcagttcactgccactta 75
            ||||||||||||||||||||||
Sbjct: 1483 tgatgcagttcactgccactta 1462
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>dbj|AK061646.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B09, full
           insert sequence
          Length = 618

 Score =  198 bits (100), Expect = 1e-47
 Identities = 181/208 (87%)
 Strand = Plus / Minus

                                                                       
Query: 232 tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 291
           |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 350 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 291

                                                                       
Query: 292 catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 351
           ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 290 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 231

                                                                       
Query: 352 gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 411
           ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 230 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 171

                                       
Query: 412 taccatcctgtctaacttcctcttgaat 439
            |||||||||||||||||||||||||||
Sbjct: 170 caccatcctgtctaacttcctcttgaat 143



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 54  tgatgcagttcactgccactta 75
           ||||||||||||||||||||||
Sbjct: 558 tgatgcagttcactgccactta 537
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>dbj|AK059435.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F10, full
            insert sequence
          Length = 1944

 Score =  198 bits (100), Expect = 1e-47
 Identities = 181/208 (87%)
 Strand = Plus / Minus

                                                                        
Query: 232  tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 291
            |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 1265 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1206

                                                                        
Query: 292  catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 351
            ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 1205 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1146

                                                                        
Query: 352  gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 411
            ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 1145 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 1086

                                        
Query: 412  taccatcctgtctaacttcctcttgaat 439
             |||||||||||||||||||||||||||
Sbjct: 1085 caccatcctgtctaacttcctcttgaat 1058



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 54   tgatgcagttcactgccactta 75
            ||||||||||||||||||||||
Sbjct: 1473 tgatgcagttcactgccactta 1452
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>dbj|AK058287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E02, full
            insert sequence
          Length = 1533

 Score =  198 bits (100), Expect = 1e-47
 Identities = 181/208 (87%)
 Strand = Plus / Minus

                                                                        
Query: 232  tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 291
            |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 1261 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1202

                                                                        
Query: 292  catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 351
            ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 1201 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1142

                                                                        
Query: 352  gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 411
            ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 1141 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 1082

                                        
Query: 412  taccatcctgtctaacttcctcttgaat 439
             |||||||||||||||||||||||||||
Sbjct: 1081 caccatcctgtctaacttcctcttgaat 1054



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 54   tgatgcagttcactgccactta 75
            ||||||||||||||||||||||
Sbjct: 1469 tgatgcagttcactgccactta 1448
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>gb|AY108897.1| Zea mays PCO080076 mRNA sequence
          Length = 1774

 Score =  167 bits (84), Expect = 4e-38
 Identities = 165/192 (85%)
 Strand = Plus / Minus

                                                                        
Query: 247  gggctcaaattcggcaaaatcaacggagccagactcgattgggggcatgaggtacgcagc 306
            ||||||||||||||| |||||||| |||||||||||||| |||||||||||||| || ||
Sbjct: 1251 gggctcaaattcggcgaaatcaaccgagccagactcgatggggggcatgaggtaggcggc 1192

                                                                        
Query: 307  gatgatctcagacactagttgggcaataagaggaaccctcttcaggttcttcaccagggg 366
            ||||||||| ||||| ||   ||| | |||||||| |||||||||||||||||| |||||
Sbjct: 1191 gatgatctcggacaccagagaggcgacaagaggaatcctcttcaggttcttcactagggg 1132

                                                                        
Query: 367  caagtcgttggactctcctatagaaatgatcttcaggttgatatctaccatcctgtctaa 426
             |  |||| ||||||||| |  | |||||||||| ||||||| || ||||||||||| | 
Sbjct: 1131 gatttcgtcggactctccgacggcaatgatcttctggttgatctcaaccatcctgtcaag 1072

                        
Query: 427  cttcctcttgaa 438
            ||||||||||||
Sbjct: 1071 cttcctcttgaa 1060
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>ref|NM_115554.2| Arabidopsis thaliana transporter AT3G56950 mRNA, complete cds
          Length = 1481

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                        
Query: 236  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 295
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 1222 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1281

                                   
Query: 296  aggtacgcagcgatgatctcaga 318
            || || ||||| | |||||||||
Sbjct: 1282 agataagcagccaagatctcaga 1304
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>ref|NM_115553.2| Arabidopsis thaliana AT103 (DICARBOXYLATE DIIRON 1) AT3G56940 (AT103)
            mRNA, complete cds
          Length = 1602

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 236  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 295
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 1275 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1216

                                   
Query: 296  aggtacgcagcgatgatctcaga 318
            || || ||||| | |||||||||
Sbjct: 1215 agataagcagccaagatctcaga 1193
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>emb|AL390921.1|ATT8M16 Arabidopsis thaliana DNA chromosome 3, BAC clone T8M16
          Length = 107271

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                         
Query: 236   tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 295
             |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 94188 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 94129

                                    
Query: 296   aggtacgcagcgatgatctcaga 318
             || || ||||| | |||||||||
Sbjct: 94128 agataagcagccaagatctcaga 94106
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>emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome 3, BAC clone F24I3
          Length = 91303

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 236  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 295
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 6275 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 6216

                                   
Query: 296  aggtacgcagcgatgatctcaga 318
            || || ||||| | |||||||||
Sbjct: 6215 agataagcagccaagatctcaga 6193
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>gb|AF236101.1| Arabidopsis thaliana putative dicarboxylate diiron protein (Crd1)
            mRNA, complete cds
          Length = 1407

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 236  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 295
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 1265 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1206

                                   
Query: 296  aggtacgcagcgatgatctcaga 318
            || || ||||| | |||||||||
Sbjct: 1205 agataagcagccaagatctcaga 1183
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>gb|U38232.1|ATU38232 Arabidopsis thaliana AT103 mRNA, complete cds
          Length = 1349

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 236  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 295
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 1241 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1182

                                   
Query: 296  aggtacgcagcgatgatctcaga 318
            || || ||||| | |||||||||
Sbjct: 1181 agataagcagccaagatctcaga 1159
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>gb|AF417577.1|AF417577 Euphorbia esula leucine zipper-containing protein gene, complete cds
          Length = 5083

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                       
Query: 413  accatcctgtctaacttcctcttgaat 439
            |||||||||||||||||||||||||||
Sbjct: 1797 accatcctgtctaacttcctcttgaat 1823



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 332  ataagaggaaccctcttcaggttcttcac 360
            ||||| ||||||||||||| |||||||||
Sbjct: 4641 ataagtggaaccctcttcaagttcttcac 4613
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>gb|AY322552.1| Triticum aestivum putative fatty acid desaturase TAZIP mRNA,
           partial cds
          Length = 903

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 248 ggctcaaattcggcaaaatcaacggagccagactcgattgggggcatgaggtacgcagcg 307
           ||||| |||||||| |||||||| ||||||||||| |  || |||||||| || ||||| 
Sbjct: 902 ggctcgaattcggcgaaatcaacagagccagactcaacaggaggcatgagataagcagcc 843

                     
Query: 308 atgatctcag 317
           | ||||||||
Sbjct: 842 aagatctcag 833
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>gb|AC149484.1| Populus trichocarpa clone Pop1-69M19, complete sequence
          Length = 96930

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                         
Query: 234   agtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggca 293
             |||| ||||| || || ||||| || ||||||||||| || |||||||||||||| ||||
Sbjct: 95940 agtaaacaagttttggttcaaactctgcaaaatcaacagatccagactcgattggtggca 95881

              
Query: 294   t 294
             |
Sbjct: 95880 t 95880



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 413   accatcctgtctaacttcctcttgaa 438
             ||||||||||| ||||||||||||||
Sbjct: 95761 accatcctgtccaacttcctcttgaa 95736
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>gb|AC119987.13| Mus musculus chromosome 9, clone RP24-502H5, complete sequence
          Length = 173716

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 343   cctcttcaggttcttcaccaggg 365
             |||||||||||||||||||||||
Sbjct: 64529 cctcttcaggttcttcaccaggg 64551
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>gb|AY221168.2| Nicotiana tabacum ZIP mRNA, complete cds
          Length = 1323

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 413 accatcctgtctaacttcctcttgaat 439
           ||||||||||| |||||||||||||||
Sbjct: 945 accatcctgtccaacttcctcttgaat 919
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>gb|BT013953.1| Lycopersicon esculentum clone 132976F, mRNA sequence
          Length = 1416

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 413  accatcctgtctaacttcctcttgaat 439
            ||||||||||| |||||||||||||||
Sbjct: 1063 accatcctgtccaacttcctcttgaat 1037
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>gb|AC100506.17| Mus musculus chromosome 9, clone RP23-144D3, complete sequence
          Length = 198388

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 343   cctcttcaggttcttcaccaggg 365
             |||||||||||||||||||||||
Sbjct: 21035 cctcttcaggttcttcaccaggg 21013
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>gb|U37437.1|INU37437 Ipomoea nil PNIL34 mRNA, complete cds
          Length = 1403

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 413  accatcctgtctaacttcctcttgaa 438
            ||||||||||| ||||||||||||||
Sbjct: 1048 accatcctgtccaacttcctcttgaa 1023
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>gb|AC102136.6| Mus musculus chromosome 3, clone RP23-269G19, complete sequence
          Length = 186659

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 367    caagtcgttggactctcctatagaa 391
              ||||| |||||||||||||||||||
Sbjct: 148356 caagtagttggactctcctatagaa 148332
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>gb|AC158583.3| Mus musculus chromosome 3, clone RP24-318B11, complete sequence
          Length = 168986

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 367    caagtcgttggactctcctatagaa 391
              ||||| |||||||||||||||||||
Sbjct: 166280 caagtagttggactctcctatagaa 166256
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>gb|AC183833.2| Pan troglodytes BAC clone CH251-141C5 from chromosome 7, complete
             sequence
          Length = 155911

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 379   ctctcctatagaaatgatctt 399
             |||||||||||||||||||||
Sbjct: 56233 ctctcctatagaaatgatctt 56253
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>gb|AC183613.3| Pan troglodytes BAC clone CH251-171F23 from chromosome 7, complete
           sequence
          Length = 180545

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 379 ctctcctatagaaatgatctt 399
           |||||||||||||||||||||
Sbjct: 425 ctctcctatagaaatgatctt 405
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>gb|AC093168.3| Homo sapiens BAC clone RP11-148M21 from 7, complete sequence
          Length = 148689

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 379   ctctcctatagaaatgatctt 399
             |||||||||||||||||||||
Sbjct: 98032 ctctcctatagaaatgatctt 98052
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>dbj|AP000752.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-689N19, complete
              sequence
          Length = 194140

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 234    agtagacaagcttgggctcaaattc 258
              ||||||||||||||| |||||||||
Sbjct: 149100 agtagacaagcttggtctcaaattc 149076
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>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 27      tccgaagcaaaaccggaacac 47
               |||||||||||||||||||||
Sbjct: 2107746 tccgaagcaaaaccggaacac 2107726
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>gb|AC099572.12| Mus musculus chromosome 15, clone RP23-16A17, complete sequence
          Length = 200229

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   tcctatagaaatgatcttca 401
             ||||||||||||||||||||
Sbjct: 81049 tcctatagaaatgatcttca 81030
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>gb|AC119839.8| Mus musculus chromosome 1, clone RP24-170N13, complete sequence
          Length = 165405

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    atgcatcattatgtttgtaa 198
              ||||||||||||||||||||
Sbjct: 100909 atgcatcattatgtttgtaa 100890
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>gb|AC102333.10| Mus musculus chromosome 18, clone RP24-542P12, complete sequence
          Length = 188821

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     acttcacatacacttctcca 26
             ||||||||||||||||||||
Sbjct: 38617 acttcacatacacttctcca 38598
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>ref|XM_549074.2| PREDICTED: Canis familiaris hypothetical LOC491954 (LOC491954), mRNA
          Length = 2952

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   tctccatccgaagcaaaacc 40
            ||||||||||||||||||||
Sbjct: 2090 tctccatccgaagcaaaacc 2109
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>gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosome 1, complete
            sequence
          Length = 200595

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  atgcatcattatgtttgtaa 198
            ||||||||||||||||||||
Sbjct: 1404 atgcatcattatgtttgtaa 1385
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>ref|XM_381007.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00831.1)
            partial mRNA
          Length = 2712

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 329  gcaataagaggaaccctcttcagg 352
            ||||||||||||||| ||||||||
Sbjct: 2081 gcaataagaggaaccttcttcagg 2058
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>emb|AL109897.30|HSJ134M13 Human DNA sequence from clone RP1-134M13 on chromosome 6q13-14.3
             Contains the 3' end of the SUMO-1-specific protease
             (SUSP1) gene, the 5' end of the MYO6 gene for Myosin VI
             (DFNA22 KIAA0389) and one CpG island, complete sequence
          Length = 121764

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gagcatgatgcatcattatg 191
             ||||||||||||||||||||
Sbjct: 43566 gagcatgatgcatcattatg 43585
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>emb|AL049551.1|HS271N20 Human DNA sequence from clone RP1-271N20 on chromosome 6q11.1-12,
             complete sequence
          Length = 65237

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 384   ctatagaaatgatcttcagg 403
             ||||||||||||||||||||
Sbjct: 58039 ctatagaaatgatcttcagg 58058
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>gb|AC161175.5| Mus musculus chromosome 18, clone RP23-2J13, complete sequence
          Length = 225231

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 7    acttcacatacacttctcca 26
            ||||||||||||||||||||
Sbjct: 3287 acttcacatacacttctcca 3268
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>gb|AC153138.3| Mus musculus BAC clone RP23-442K7 from chromosome 7, complete sequence
          Length = 206648

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    gtaaagataggcagagatga 214
              ||||||||||||||||||||
Sbjct: 141296 gtaaagataggcagagatga 141277
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>gb|AC154207.3| Mus musculus BAC clone RP24-377E1 from chromosome 13, complete sequence
          Length = 181174

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   tgtaaagataggcagagatg 213
             ||||||||||||||||||||
Sbjct: 95539 tgtaaagataggcagagatg 95520
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>gb|AC068722.6|AC068722 Homo sapiens chromosome 15 clone CTD-2306A12 map 15q21.1, complete
             sequence
          Length = 151924

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   agacaagcttgggctcaaat 256
             ||||||||||||||||||||
Sbjct: 64006 agacaagcttgggctcaaat 64025
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>dbj|AK111043.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-B07, full
           insert sequence
          Length = 634

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 219 tttttcgacaaattcagtag 238
           ||||||||||||||||||||
Sbjct: 631 tttttcgacaaattcagtag 612
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>dbj|AP001825.4| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2537O9, complete
              sequences
          Length = 206624

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 379    ctctcctatagaaatgatct 398
              ||||||||||||||||||||
Sbjct: 158166 ctctcctatagaaatgatct 158147
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>emb|AL935126.18| Zebrafish DNA sequence from clone CH211-186J3, complete sequence
          Length = 174986

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   atgatgcatcattatgtttg 195
             ||||||||||||||||||||
Sbjct: 72853 atgatgcatcattatgtttg 72872
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 255     attcggcaaaatcaacggag 274
               ||||||||||||||||||||
Sbjct: 3368423 attcggcaaaatcaacggag 3368442
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>gb|AC150903.2| Mus musculus BAC clone RP23-35B12 from chromosome 7, complete sequence
          Length = 217178

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    gtaaagataggcagagatga 214
              ||||||||||||||||||||
Sbjct: 162669 gtaaagataggcagagatga 162688


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,512,623
Number of Sequences: 3902068
Number of extensions: 3512623
Number of successful extensions: 67520
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67388
Number of HSP's gapped (non-prelim): 123
length of query: 439
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 417
effective length of database: 17,147,199,772
effective search space: 7150382304924
effective search space used: 7150382304924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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