| Clone Name | rbaet13a02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY968589.1| Triticum aestivum ice recrystallization inhibition protein 2 precursor, mRNA, complete cds Length = 1596 Score = 343 bits (173), Expect = 2e-91 Identities = 260/289 (89%) Strand = Plus / Minus Query: 4 taaaacgttttgtggatatttaagtagtaaaaggatactatacccatgaagttacaaata 63 ||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| Sbjct: 1407 taaaacgttttgtggatattttagtagtaataggattctatacccatgaagttacaaata 1348 Query: 64 cgcgattgggctcatcaagcgattgtaaactacattgaacttggacaaggacatgagctc 123 ||||||||| | || |||| |||||| ||||||| ||||||||||||||||||||||||| Sbjct: 1347 cgcgattggccccaccaagggattgtgaactacactgaacttggacaaggacatgagctc 1288 Query: 124 ctcgggggaagagggaatcaatccactcacatatcactatcctccagttactactttgtt 183 ||| || ||||||||||| |||||||| ||| ||||||| ||||||||||| |||||||| Sbjct: 1287 ctccggagaagagggaattaatccactgacagatcactaacctccagttacgactttgtt 1228 Query: 184 gttcccagatacgacatggttgccccctgatacaacattgttgctccctgtcacaacatt 243 |||||||||||||||||||| | ||| ||||||||||| |||||||| || || ||||| Sbjct: 1227 attcccagatacgacatggtttctcccagatacaacattattgctcccagttacgacatt 1168 Query: 244 gtttctcccggatacaacattgttgctcccatacacaacatggtttctc 292 ||| ||||||||||| ||||||| ||||||| | ||||||||||||||| Sbjct: 1167 gttcctcccggatacgacattgtcgctcccagaaacaacatggtttctc 1119
>gb|AY968588.1| Triticum aestivum ice recrystallization inhibition protein 1 precursor, mRNA, complete cds Length = 1079 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 179 ttgttgttcccagatacgacatggttgccccctgataca 217 |||||| ||||||||||||||||||||| ||| |||||| Sbjct: 923 ttgttgctcccagatacgacatggttgctcccagataca 885
>gb|AC132471.4| Mus musculus BAC clone RP23-106E17 from 10, complete sequence Length = 197822 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 actacattgaacttggacaagg 113 |||||||||||||||||||||| Sbjct: 64135 actacattgaacttggacaagg 64156
>gb|AC145945.2| Gallus gallus chromosome UNK clone CH261-23M4, complete sequence Length = 199148 Score = 42.1 bits (21), Expect = 0.97 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 tggatatttaagtagtaaaag 36 ||||||||||||||||||||| Sbjct: 197509 tggatatttaagtagtaaaag 197489
>emb|AL713889.19| Human DNA sequence from clone RP11-354A16 on chromosome 1 Contains the 5' end of the ILF2 gene for interleukin enhancer binding factor 2, 45kDa, the NPR1 gene for natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A), a novel gene and a CpG island, complete sequence Length = 54184 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 ctcctcgggggaagagggaa 140 |||||||||||||||||||| Sbjct: 14953 ctcctcgggggaagagggaa 14934
>gb|AC007645.4|AC007645 Drosophila melanogaster, chromosome 3R, region 86C-86D, BAC clone BACR04L09, complete sequence Length = 165136 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 acaacattgttgctcccata 276 |||||||||||||||||||| Sbjct: 113218 acaacattgttgctcccata 113199
>gb|AC107033.3| Homo sapiens 12 BAC RP11-669N7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 182000 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gggaatcaatccactcacat 155 |||||||||||||||||||| Sbjct: 40721 gggaatcaatccactcacat 40702
>emb|AJ277399.1|LPE277399 Lolium perenne partial mRNA for ice recrystallisation inhibition protein Length = 357 Score = 40.1 bits (20), Expect = 3.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 176 actttgttgttcccagatacgacatggttgccccctgatacaacattgttgctccc 231 ||||||||| | |||||||| || ||||||| ||| ||||| |||||||||||| Sbjct: 341 actttgttgcttccagatacaacgtggttgctcccagatacggtattgttgctccc 286
>gb|AF190631.1|AF190631 Homo sapiens natriuretic peptide receptor A (NPR1) gene, complete cds Length = 15810 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 ctcctcgggggaagagggaa 140 |||||||||||||||||||| Sbjct: 41 ctcctcgggggaagagggaa 22
>emb|BX936416.11| Zebrafish DNA sequence from clone CH211-194I16 in linkage group 18, complete sequence Length = 214763 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tttgtggatatttaagtagt 31 |||||||||||||||||||| Sbjct: 141532 tttgtggatatttaagtagt 141513
>gb|AE003689.2| Drosophila melanogaster chromosome 3R, section 27 of 118 of the complete sequence Length = 215899 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 acaacattgttgctcccata 276 |||||||||||||||||||| Sbjct: 205712 acaacattgttgctcccata 205693
>dbj|AB012188.1| Homo sapiens gene for ANP type A receptor, promoter region Length = 2075 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 ctcctcgggggaagagggaa 140 |||||||||||||||||||| Sbjct: 1305 ctcctcgggggaagagggaa 1286 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,250,684 Number of Sequences: 3902068 Number of extensions: 2250684 Number of successful extensions: 39388 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 39364 Number of HSP's gapped (non-prelim): 23 length of query: 292 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 270 effective length of database: 17,147,199,772 effective search space: 4629743938440 effective search space used: 4629743938440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)