ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet12f11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clo... 825 0.0
2emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clo... 779 0.0
3emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clo... 694 0.0
4gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, comple... 579 e-162
5gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete ... 549 e-153
6emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clo... 533 e-148
7emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clo... 500 e-138
8gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete ... 468 e-129
9gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete ... 432 e-118
10emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin 347 2e-92
11gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, comple... 256 6e-65
12dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds 172 7e-40
13dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds 78 3e-11
14gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, com... 44 0.42
15gb|AC138101.8| Mus musculus chromosome 5, clone RP23-149H20, com... 44 0.42
16gb|AC125610.4| Homo sapiens 3 BAC RP11-189B7 (Roswell Park Cance... 44 0.42
17gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, co... 44 0.42
18gb|AC125194.4| Mus musculus BAC clone RP23-275K6 from chromosome... 42 1.7
19emb|AL356115.9| Human DNA sequence from clone RP11-486O22 on chr... 42 1.7
20gb|AC074321.10| Homo sapiens chromosome 10 clone RP11-122F14, co... 42 1.7
21gb|AC150277.2| Mus musculus BAC clone RP23-97E12 from 18, comple... 42 1.7
22gb|AC122496.2| Mus musculus BAC clone RP24-400K16 from 5, comple... 40 6.5
23emb|Z11873.1|SSGTFJKG S.salivarius gtfJ and gtfK genes for gluco... 40 6.5
24gb|AC116341.2| Homo sapiens chromosome 5 clone RP11-144A5, compl... 40 6.5
25emb|BX322615.6| Zebrafish DNA sequence from clone DKEY-81L20 in ... 40 6.5
26gb|AC112183.3| Homo sapiens chromosome 5 clone RP11-152F4, compl... 40 6.5
27gb|AC012467.9| Homo sapiens chr3 BAC RP11-884K10 (Roswell Park C... 40 6.5
28tpg|BK000650.1| TPA: TPA_exp: Mus musculus otopetrin 1 isoform a... 40 6.5
29gb|AC084071.20| Mus musculus strain C57BL/6J chromosome 5 clone ... 40 6.5
30gb|AC124126.14| Mus musculus chromosome 18, clone RP23-377C8, co... 40 6.5
31gb|L25932.1|HUMLBR01 Homo sapiens integral nuclear envelope inne... 40 6.5
32gb|M64111.1|STRGTFJA Streptococcus salivarius glucosyltransferas... 40 6.5

>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4)
          Length = 637

 Score =  825 bits (416), Expect = 0.0
 Identities = 459/472 (97%), Gaps = 1/472 (0%)
 Strand = Plus / Minus

                                                                       
Query: 6   atcacataatatatccatggatcttttatattaagccaagggtacaaatagattcatcgt 65
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 637 atcacataatatatccatggaacttttatattaagccaagggtacaaatagattcatcgt 578

                                                                       
Query: 66  ggcgactcttattggaacaagggaaaaagacaaatacataagtaagatgatacattggct 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ggcgactcttattggaacaagggaaaaagacaaatacataagtaagatgatacattggct 518

                                                                       
Query: 126 tccatacagctgatggtatcaagattattcaagacaaaatgactatacgaccttggccat 185
           ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 517 tccatacagctgatggtatcaagattattcaagacaaaatgacaatacgaccatggccat 458

                                                                       
Query: 186 agaaatcatgcacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcat 245
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 agaaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcat 398

                                                                       
Query: 246 tacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatcttttggccac 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 397 tacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccac 338

                                                                       
Query: 306 ggaaaacattgtccacgttgtcacagacagaattcctgcatccaatggtgcagtactgag 365
           ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 337 ggaaaacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgcg 278

                                                                       
Query: 366 tgacatctggttcaccggattcagggagaagattcagtttaggatagtcactaggacatt 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 277 tgacatctggttcaccggattcagggagaagattcagtttaggatagtcactagggcatt 218

                                                               
Query: 426 ttgaaccgcttatgattttacaaccac-agcacctgcacagactggacggga 476
           ||| ||| |||||||||||||||| || ||||||||| ||||||||||||||
Sbjct: 217 ttggaccacttatgattttacaacgacaagcacctgcgcagactggacggga 166



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>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4)
          Length = 658

 Score =  779 bits (393), Expect = 0.0
 Identities = 457/477 (95%), Gaps = 1/477 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtgtatcacataatatatccatggatcttttatattaagccaagggtacaaatagattc 60
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 649 agtgtatcacataatatatccatggaacttttatattaagccaagggtacaaatagattc 590

                                                                       
Query: 61  atcgtggcgactcttattggaacaagggaaaaagacaaatacataagtaagatgatacat 120
           ||||||||||| ||||||||||||||||||||| | |||| |||||||||||||||||||
Sbjct: 589 atcgtggcgacccttattggaacaagggaaaaacagaaatgcataagtaagatgatacat 530

                                                                       
Query: 121 tggcttccatacagctgatggtatcaagattattcaagacaaaatgactatacgaccttg 180
           |  |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 529 ttccttcgatacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttg 470

                                                                       
Query: 181 gccatagaaatcatgcacaagaacgcatgattaggcttcaacagactgaatgactgcacc 240
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 469 gccatagaaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcacc 410

                                                                       
Query: 241 atcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatcttttg 300
           ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 409 atcattacaaaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttg 350

                                                                       
Query: 301 gccacggaaaacattgtccacgttgtcacagacagaattcctgcatccaatggtgcagta 360
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gccacggaaaacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagta 290

                                                                       
Query: 361 ctgagtgacatctggttcaccggattcagggagaagattcagtttaggatagtcactagg 420
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 289 ctgagtgacatctggttcaccggattcagggagaagattaagtttaggatagtcactagg 230

                                                                    
Query: 421 acattttgaaccgcttatgattttacaaccac-agcacctgcacagactggacggga 476
            ||||||| ||| |||||||||||||||| || ||||||||| ||||||||||||||
Sbjct: 229 gcattttggaccacttatgattttacaacgacaagcacctgcgcagactggacggga 173



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>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2)
          Length = 453

 Score =  694 bits (350), Expect = 0.0
 Identities = 430/454 (94%), Gaps = 2/454 (0%)
 Strand = Plus / Minus

                                                                       
Query: 16  atatccatggatcttttatattaagccaagggtacaaatagattcatcgtggcgactctt 75
           ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 453 atatccatggaacttt-atattaagccaagggtacaaatagattcatcgtggcgaccctt 395

                                                                       
Query: 76  attggaacaagggaaaaagacaaatacataagtaagatgatacattggcttccatacagc 135
           |||||||||||||||||| | |||| ||||||||||||||||||||  |||| |||||||
Sbjct: 394 attggaacaagggaaaaacagaaatgcataagtaagatgatacatttccttcgatacagc 335

                                                                       
Query: 136 tgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatg 195
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 334 tgatggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaaatcatg 275

                                                                       
Query: 196 cacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 255
           |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 274 cacaagaaggcatgattaggattcaacagactgaatgactgcaccatcattacaaaaacg 215

                                                                       
Query: 256 ggcacatgcgttgctgcagagtcccatgtcgaatttcatcttttggccacggaaaacatt 315
           ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 214 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccatggaaaacatt 155

                                                                       
Query: 316 gtccacgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctgg 375
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 154 gtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatcggg 95

                                                                       
Query: 376 ttcaccggattcagggagaagattcagtttaggatagtcactaggacattttgaaccgct 435
           |||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||| ||
Sbjct: 94  ttcaccggattcagggagaagattaagtttaggatagtcactagggcattttggaccact 35

                                             
Query: 436 tatgattttacaaccac-agcacctgcacagact 468
           |||||||||||||| || ||||||||| ||||||
Sbjct: 34  tatgattttacaacgacaagcacctgcgcagact 1



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>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds
          Length = 2406

 Score =  579 bits (292), Expect = e-162
 Identities = 307/312 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1    agtgtatcacataatatatccatggatcttttatattaagccaagggtacaaatagattc 60
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2342 agtgtatcacataatatatccatggaacttttatattaagccaagggtacaaatagattc 2283

                                                                        
Query: 61   atcgtggcgactcttattggaacaagggaaaaagacaaatacataagtaagatgatacat 120
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2282 atcgtggcgactcttgttggaacaagggaaaaagacaaatacataagtaagatgatacat 2223

                                                                        
Query: 121  tggcttccatacagctgatggtatcaagattattcaagacaaaatgactatacgaccttg 180
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2222 tggcttccatacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttg 2163

                                                                        
Query: 181  gccatagaaatcatgcacaagaacgcatgattaggcttcaacagactgaatgactgcacc 240
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2162 gccatagaaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcacc 2103

                                                                        
Query: 241  atcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatcttttg 300
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2102 atcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttg 2043

                        
Query: 301  gccacggaaaac 312
            ||||||||||||
Sbjct: 2042 gccacggaaaac 2031



 Score =  141 bits (71), Expect = 2e-30
 Identities = 93/99 (93%), Gaps = 1/99 (1%)
 Strand = Plus / Minus

                                                                        
Query: 379  accggattcagggagaagattcagtttaggatagtcactaggacattttgaaccgcttat 438
            |||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||
Sbjct: 1776 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 1717

                                                   
Query: 439  gattttacaaccac-agcacctgcacagactggacggga 476
            ||||||||||| || ||||||||| ||||||||||||||
Sbjct: 1716 gattttacaacgacaagcacctgcgcagactggacggga 1678



 Score =  123 bits (62), Expect = 6e-25
 Identities = 68/70 (97%)
 Strand = Plus / Minus

                                                                        
Query: 312  cattgtccacgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacat 371
            ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1937 cattgtccatgttgtcacagacagaattcgtgcatccaatggtgcagtactgagtgacat 1878

                      
Query: 372  ctggttcacc 381
            ||||||||||
Sbjct: 1877 ctggttcacc 1868



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>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940
          Length = 663

 Score =  549 bits (277), Expect = e-153
 Identities = 405/445 (91%), Gaps = 2/445 (0%)
 Strand = Plus / Minus

                                                                       
Query: 10  cataatatatccatggatcttttatattaagccaagggtacaaatagattcatcgtggcg 69
           ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||  
Sbjct: 658 cataatatatccatggaacttttatattaagccaagggtataaatagattcatcgtgggt 599

                                                                       
Query: 70  actcttattggaacaagggaaaaag-acaaatacataagtaagatgatacattggcttcc 128
            ||||||||||||| |||||||||  | |||||||||| |||||||||||||| ||||| 
Sbjct: 598 tctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcg 539

                                                                       
Query: 129 atacagctgatggtatcaagattattcaagacaaaatgactatacgaccttggccataga 188
           || | | |||||||||||||||| || || | |||||||| | |||||||||||||||||
Sbjct: 538 at-ctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 480

                                                                       
Query: 189 aatcatgcacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattac 248
           |||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 479 aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattac 420

                                                                       
Query: 249 agaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatcttttggccacgga 308
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| 
Sbjct: 419 agaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggg 360

                                                                       
Query: 309 aaacattgtccacgttgtcacagacagaattcctgcatccaatggtgcagtactgagtga 368
           |||||||||||| |||||||||||| ||| ||| ||||||||| |||||||||| |||  
Sbjct: 359 aaacattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcg 300

                                                                       
Query: 369 catctggttcaccggattcagggagaagattcagtttaggatagtcactaggacattttg 428
           ||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||
Sbjct: 299 catttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttg 240

                                    
Query: 429 aaccgcttatgattttacaaccaca 453
             |||||||||||||||||||||||
Sbjct: 239 ggccgcttatgattttacaaccaca 215



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>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3)
          Length = 491

 Score =  533 bits (269), Expect = e-148
 Identities = 397/437 (90%), Gaps = 2/437 (0%)
 Strand = Plus / Minus

                                                                       
Query: 18  atccatggatcttttatattaagccaagggtacaaatagattcatcgtggcgactcttat 77
           ||||||||| |||||||||||||||||||| | ||||||||||||||||| |||||||||
Sbjct: 491 atccatggaacttttatattaagccaagggcataaatagattcatcgtggtgactcttat 432

                                                                       
Query: 78  tggaacaagggaaaaag-acaaatacataagtaagatgatacattggcttccatacagct 136
           |||||| |||||||||  | |||||||||| |||||||||||||| ||||| || | | |
Sbjct: 431 tggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcgat-ctggt 373

                                                                       
Query: 137 gatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatgc 196
           ||||||||||||||| || || | |||||||  | |||||||||||||||||||||||||
Sbjct: 372 gatggtatcaagattgttgaacagaaaatgaaaaaacgaccttggccatagaaatcatgc 313

                                                                       
Query: 197 acaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgg 256
            |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 312 ccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgg 253

                                                                       
Query: 257 gcacatgcgttgctgcagagtcccatgtcgaatttcatcttttggccacggaaaacattg 316
           |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 252 gcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattg 193

                                                                       
Query: 317 tccacgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggt 376
           |||| |||||||||||| ||| ||||||||||||| |||||||||| |||  ||| ||||
Sbjct: 192 tccaggttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggt 133

                                                                       
Query: 377 tcaccggattcagggagaagattcagtttaggatagtcactaggacattttgaaccgctt 436
           |||||||||||||||||||||||||| ||||||||||| ||||||||  |||  ||||||
Sbjct: 132 tcaccggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgctt 73

                            
Query: 437 atgattttacaaccaca 453
           |||||||||||||||||
Sbjct: 72  atgattttacaaccaca 56



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>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3)
          Length = 544

 Score =  500 bits (252), Expect = e-138
 Identities = 368/404 (91%), Gaps = 2/404 (0%)
 Strand = Plus / Minus

                                                                       
Query: 51  aaatagattcatcgtggcgactcttattggaacaagggaaaaag-acaaatacataagta 109
           ||||||||||||||||||||||||||||||||| |||||||||  | |||||||||| ||
Sbjct: 544 aaatagattcatcgtggcgactcttattggaacgagggaaaaaacagaaatacataacta 485

                                                                       
Query: 110 agatgatacattggcttccatacagctgatggtatcaagattattcaagacaaaatgact 169
           |||||||||||| ||||| ||   | |||||||||||||||| || || | |||||||| 
Sbjct: 484 agatgatacatttgcttcgatgtgg-tgatggtatcaagattgttgaacagaaaatgaca 426

                                                                       
Query: 170 atacgaccttggccatagaaatcatgcacaagaacgcatgattaggcttcaacagactga 229
           | ||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||
Sbjct: 425 aaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaagagactga 366

                                                                       
Query: 230 atgactgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaat 289
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 atgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaat 306

                                                                       
Query: 290 ttcatcttttggccacggaaaacattgtccacgttgtcacagacagaattcctgcatcca 349
           ||||||| |||||||||| |||||||||||| |||||||||||| ||| |||||||||||
Sbjct: 305 ttcatctcttggccacgggaaacattgtccatgttgtcacagacggaagtcctgcatcca 246

                                                                       
Query: 350 atggtgcagtactgagtgacatctggttcaccggattcagggagaagattcagtttagga 409
           || |||||||||| |||  ||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 245 attgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttagga 186

                                                       
Query: 410 tagtcactaggacattttgaaccgcttatgattttacaaccaca 453
           ||||| ||||||||| |||  |||||||||||||||||||||||
Sbjct: 185 tagtccctaggacatgttgggccgcttatgattttacaaccaca 142



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>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348
          Length = 608

 Score =  468 bits (236), Expect = e-129
 Identities = 349/384 (90%), Gaps = 2/384 (0%)
 Strand = Plus / Minus

                                                                       
Query: 71  ctcttattggaacaagggaaaaag-acaaatacataagtaagatgatacattggcttcca 129
           ||||||||||||| |||||||||  | |||||||||| |||||||||||||| ||||| |
Sbjct: 597 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 538

                                                                       
Query: 130 tacagctgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaa 189
           | | | |||||||||||||||| || || | |||||||| | ||||||||||||||||||
Sbjct: 537 t-ctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaa 479

                                                                       
Query: 190 atcatgcacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattaca 249
           ||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 478 atcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattaca 419

                                                                       
Query: 250 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatcttttggccacggaa 309
           ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 418 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggga 359

                                                                       
Query: 310 aacattgtccacgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgac 369
           ||||||||||| |||||||||||| ||| ||| ||||||||| |||||||||| |||  |
Sbjct: 358 aacattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgc 299

                                                                       
Query: 370 atctggttcaccggattcagggagaagattcagtttaggatagtcactaggacattttga 429
           || |||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||| 
Sbjct: 298 atttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttgg 239

                                   
Query: 430 accgcttatgattttacaaccaca 453
            |||||||||||||||||||||||
Sbjct: 238 gccgcttatgattttacaaccaca 215



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>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872
          Length = 540

 Score =  432 bits (218), Expect = e-118
 Identities = 293/318 (92%)
 Strand = Plus / Minus

                                                                       
Query: 136 tgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatg 195
           |||||||||||||||| || || | |||||||| | ||||||||||||||||||||||||
Sbjct: 532 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 473

                                                                       
Query: 196 cacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 255
           | |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 472 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 413

                                                                       
Query: 256 ggcacatgcgttgctgcagagtcccatgtcgaatttcatcttttggccacggaaaacatt 315
           ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 412 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacatt 353

                                                                       
Query: 316 gtccacgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctgg 375
           ||||| |||||||||||| ||| ||| ||||||||| |||||||||| |||  ||| |||
Sbjct: 352 gtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgcatttgg 293

                                                                       
Query: 376 ttcaccggattcagggagaagattcagtttaggatagtcactaggacattttgaaccgct 435
           ||||||||||||||||||||||||||| ||||||||||| ||||||||| |||  |||||
Sbjct: 292 ttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgct 233

                             
Query: 436 tatgattttacaaccaca 453
           ||||||||||||||||||
Sbjct: 232 tatgattttacaaccaca 215



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>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin
          Length = 414

 Score =  347 bits (175), Expect = 2e-92
 Identities = 226/243 (93%)
 Strand = Plus / Minus

                                                                       
Query: 211 ttaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgct 270
           ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 414 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 355

                                                                       
Query: 271 gcagagtcccatgtcgaatttcatcttttggccacggaaaacattgtccacgttgtcaca 330
           |||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||
Sbjct: 354 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 295

                                                                       
Query: 331 gacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccggattcagg 390
           ||| ||| ||||||||||||| |||||||||| |||  ||| ||||||||||||||||||
Sbjct: 294 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 235

                                                                       
Query: 391 gagaagattcagtttaggatagtcactaggacattttgaaccgcttatgattttacaacc 450
           |||||||||||| ||||||||||| ||||||||| |||  ||||||||||||||||||||
Sbjct: 234 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 175

              
Query: 451 aca 453
           |||
Sbjct: 174 aca 172



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>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds
          Length = 2259

 Score =  256 bits (129), Expect = 6e-65
 Identities = 165/177 (93%)
 Strand = Plus / Minus

                                                                        
Query: 136  tgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatg 195
            |||||||||||||||| || || | |||||||| | ||||||||||||||||||||||||
Sbjct: 2230 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 2171

                                                                        
Query: 196  cacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 255
            | |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2170 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 2111

                                                                     
Query: 256  ggcacatgcgttgctgcagagtcccatgtcgaatttcatcttttggccacggaaaac 312
            |||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||
Sbjct: 2110 ggcacatgcgttgctgcagagtcccatgtcaaatttcatctcttggccacgggaaac 2054



 Score =  101 bits (51), Expect = 2e-18
 Identities = 69/75 (92%)
 Strand = Plus / Minus

                                                                        
Query: 379  accggattcagggagaagattcagtttaggatagtcactaggacattttgaaccgcttat 438
            |||||||||||||||||||||||| ||||||||||| ||||||||  |||  ||||||||
Sbjct: 1797 accggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttat 1738

                           
Query: 439  gattttacaaccaca 453
            |||||||||||||||
Sbjct: 1737 gattttacaaccaca 1723



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                        
Query: 312  cattgtccacgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacat 371
            ||||||||| ||||||||| || ||| ||||||||||||| |||||||||| ||| ||||
Sbjct: 1963 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcacat 1904

                      
Query: 372  ctggttcacc 381
             |||||||||
Sbjct: 1903 ttggttcacc 1894



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>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds
          Length = 641

 Score =  172 bits (87), Expect = 7e-40
 Identities = 201/239 (84%)
 Strand = Plus / Minus

                                                                       
Query: 174 gaccttggccatagaaatcatgcacaagaacgcatgattaggcttcaacagactgaatga 233
           ||||| ||||| |||||||||||||||||  ||||||||| ||||  | |||  ||||||
Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgattaagcttggaaagatggaatga 437

                                                                       
Query: 234 ctgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttca 293
           | ||||| |  |||||||||||  ||||| | ||| ||||||||  |||||||| |||||
Sbjct: 436 cggcacccttgttacagaaacgaacacattctttgttgcagagtagcatgtcgattttca 377

                                                                       
Query: 294 tcttttggccacggaaaacattgtccacgttgtcacagacagaattcctgcatccaatgg 353
           ||| ||||||| | | ||||||||||| ||||||||| || ||| || ||||||| ||||
Sbjct: 376 tctcttggccatgaataacattgtccatgttgtcacaaacggaagtcatgcatcctatgg 317

                                                                      
Query: 354 tgcagtactgagtgacatctggttcaccggattcagggagaagattcagtttaggatag 412
           ||||||||| ||||||||| ||||||||||||||| | ||||||| |||||||| ||||
Sbjct: 316 tgcagtactcagtgacatccggttcaccggattcaagtagaagatgcagtttagaatag 258



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>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds
          Length = 678

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 111/135 (82%)
 Strand = Plus / Minus

                                                                       
Query: 172 acgaccttggccatagaaatcatgcacaagaacgcatgattaggcttcaacagactgaat 231
           |||||| ||||||||||||| | |||| |||  ||||||||||||  | |||||  || |
Sbjct: 549 acgaccatggccatagaaataaggcacgagagtgcatgattaggccccgacagatggatt 490

                                                                       
Query: 232 gactgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaattt 291
           ||| ||||| |  |||||||||||| ||||||||||| |||||| |  ||||||||  ||
Sbjct: 489 gacggcacccttgttacagaaacggacacatgcgttgttgcagacttgcatgtcgatgtt 430

                          
Query: 292 catcttttggccacg 306
           ||||| |||||||||
Sbjct: 429 catctcttggccacg 415



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>gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, complete sequence
          Length = 264425

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 82   acaagggaaaaagacaaataca 103
            ||||||||||||||||||||||
Sbjct: 6908 acaagggaaaaagacaaataca 6887



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>gb|AC138101.8| Mus musculus chromosome 5, clone RP23-149H20, complete sequence
          Length = 211521

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 82    acaagggaaaaagacaaataca 103
             ||||||||||||||||||||||
Sbjct: 86367 acaagggaaaaagacaaataca 86346



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>gb|AC125610.4| Homo sapiens 3 BAC RP11-189B7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 159706

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 84    aagggaaaaagacaaatacata 105
             ||||||||||||||||||||||
Sbjct: 85293 aagggaaaaagacaaatacata 85272



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>gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, complete sequence
          Length = 240821

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 82    acaagggaaaaagacaaataca 103
             ||||||||||||||||||||||
Sbjct: 41781 acaagggaaaaagacaaataca 41802



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>gb|AC125194.4| Mus musculus BAC clone RP23-275K6 from chromosome 18, complete sequence
          Length = 155706

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 82     acaagggaaaaagacaaatacataa 106
              |||||||||||||| ||||||||||
Sbjct: 114727 acaagggaaaaagaaaaatacataa 114751



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>emb|AL356115.9| Human DNA sequence from clone RP11-486O22 on chromosome 10 Contains
            the 3' end of a novel gene (KIAA1128, FLJ14262, FLJ25809)
            , the 5' end of a Siah-interacting protein (SIP)
            (calcyclin binding protein) pseudogene, ribosomal protein
            S3A pseudogene 5 (RPS3AP5) and two CpG islands, complete
            sequence
          Length = 150151

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 4    gtatcacataatatatccatg 24
            |||||||||||||||||||||
Sbjct: 8649 gtatcacataatatatccatg 8629



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>gb|AC074321.10| Homo sapiens chromosome 10 clone RP11-122F14, complete sequence
          Length = 177203

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     gtatcacataatatatccatg 24
             |||||||||||||||||||||
Sbjct: 41668 gtatcacataatatatccatg 41688



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>gb|AC150277.2| Mus musculus BAC clone RP23-97E12 from 18, complete sequence
          Length = 179399

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 82    acaagggaaaaagacaaatacataa 106
             |||||||||||||| ||||||||||
Sbjct: 54540 acaagggaaaaagaaaaatacataa 54564



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>gb|AC122496.2| Mus musculus BAC clone RP24-400K16 from 5, complete sequence
          Length = 180081

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      tcacataatatatccatgga 26
              ||||||||||||||||||||
Sbjct: 155539 tcacataatatatccatgga 155558



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>emb|Z11873.1|SSGTFJKG S.salivarius gtfJ and gtfK genes for glucosyltransferase I and
            glucosyltransferase S
          Length = 10125

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 130  tacagctgatggtatcaaga 149
            ||||||||||||||||||||
Sbjct: 2450 tacagctgatggtatcaaga 2469



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>gb|AC116341.2| Homo sapiens chromosome 5 clone RP11-144A5, complete sequence
          Length = 31443

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    ggaaaaagacaaatacataa 106
             ||||||||||||||||||||
Sbjct: 11773 ggaaaaagacaaatacataa 11792



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>emb|BX322615.6| Zebrafish DNA sequence from clone DKEY-81L20 in linkage group 17,
             complete sequence
          Length = 120315

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   aacagactgaatgactgcac 239
             ||||||||||||||||||||
Sbjct: 61583 aacagactgaatgactgcac 61602



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>gb|AC112183.3| Homo sapiens chromosome 5 clone RP11-152F4, complete sequence
          Length = 163612

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     ggaaaaagacaaatacataa 106
              ||||||||||||||||||||
Sbjct: 160156 ggaaaaagacaaatacataa 160175



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>gb|AC012467.9| Homo sapiens chr3 BAC RP11-884K10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 177072

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 452   cagcacctgcacagactgga 471
             ||||||||||||||||||||
Sbjct: 77862 cagcacctgcacagactgga 77881



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>tpg|BK000650.1| TPA: TPA_exp: Mus musculus otopetrin 1 isoform a and isoform b (Otop1)
             gene, complete cds; alternatively spliced
          Length = 28272

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   ttgtccacgttgtcacagac 333
             ||||||||||||||||||||
Sbjct: 14605 ttgtccacgttgtcacagac 14624



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>gb|AC084071.20| Mus musculus strain C57BL/6J chromosome 5 clone rp23-426e16, complete
             sequence
          Length = 194175

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   ttgtccacgttgtcacagac 333
             ||||||||||||||||||||
Sbjct: 78067 ttgtccacgttgtcacagac 78086



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>gb|AC124126.14| Mus musculus chromosome 18, clone RP23-377C8, complete sequence
          Length = 192355

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     acaaatacataagtaagatg 114
              ||||||||||||||||||||
Sbjct: 111212 acaaatacataagtaagatg 111193



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>gb|L25932.1|HUMLBR01 Homo sapiens integral nuclear envelope inner membrane protein (LBR)
            gene, 5' UTR, exons 1 and 2
          Length = 5132

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 87   ggaaaaagacaaatacataa 106
            ||||||||||||||||||||
Sbjct: 4760 ggaaaaagacaaatacataa 4779



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>gb|M64111.1|STRGTFJA Streptococcus salivarius glucosyltransferase I (gtfJ) gene, complete
            cds, and gtfK gene, 5' end
          Length = 4941

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 130  tacagctgatggtatcaaga 149
            ||||||||||||||||||||
Sbjct: 2450 tacagctgatggtatcaaga 2469


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,345,750
Number of Sequences: 3902068
Number of extensions: 4345750
Number of successful extensions: 82852
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82791
Number of HSP's gapped (non-prelim): 50
length of query: 483
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 461
effective length of database: 17,147,199,772
effective search space: 7904859094892
effective search space used: 7904859094892
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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